Carg27563 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg27563
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	double-stranded RNA-binding protein 2-like
Location	Carg_Chr12: 6911881 .. 6915185 (+)
RNA-Seq Expression	Carg27563
Synteny	Carg27563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTAATTTGTGAAGTGAGTGGAAGGAGGAGTGAAGCGGTGCTGAGACTGAATCGGAGCGGAAATGTACAAGAACCAGCTTCAAGAGCTGGCACAGAGGAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACGGTTAACTTCAATGGCGAGGTCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGTCAGGCTGAGCACTCCGCGGCTGAGGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCACTTGCGGCTAGGATACTGGTGAGTGTTGTTTGGTTTTCGTTTTTGTTCTTCGGCTTGCTTGATCTTCATTTCTTTGTTGTTTTTTCATGCGACGAATCAATGTTACTGTTTGCGGTAGGATTATTCGTGGAAATTAGCTAGTAGTTTTAGGTTTTTGTTTTGTTAGTATTGGTTGAGCATTTTGTTCTTGTTCTCTTCTTAAGATTCCTGATATCATTTCCGGTTTCTGCGGCTAAGAAGCGTAGATTATAGAGAAATTGCATAATCTGTGCGTCTTGTTAGCGATGGCACCTTTGCACCTCAGCTAGAGTTCTTAGTCTGCGAGTATCTCGGTCGATGGGTTGATTAAGATCTTAGATATAGTTTTTTCTGCTATCTCGGGTTAAAATGATGGCTGTGACATGGTTTAGGTTGGGGTTTTTCTTCTCAGTTACGAGATGAACTTGTAATCTCTCTGATCGGCCGGAATCCTCTGATTAGGCCTACGGTTTAGGGTCATCTTCGAACGAAAAGTGTGACCTCGTGACGCTTCCTCGAGGTTCCGTTCAGTGAGAGGAGGTATCTAGTTTTGTTTACCTTATTATCTCGGAACCAGCTGTCGGGAGTAGTCTTCTTGGGCAAGGTTGTGTAATTAATTTTCTCATTAATGGGTTTGTCGGTCGTCCAATTGTGTTTTCGGTAGCTCCCAACTTTGGCTCATTTTATTTCTCCGATCTCATAAATGACCAGATGGGTATTGTAGCAACGGCAGGGACTAGGAATCCAGCACCGATTGTGATAAACTTGTTGGAGGCTGAATTTCAGATGGAGATGCTGATTCATGTTTTAACCAATTAGAAATTTGGAGGACTTTGTCATTATCTCCGTTCATAAAAGTTCATAGGCTTTATAACTTCGGTTTTAGATGTAATTATTTCTCCCCAAGTTTCAGTAGAAATTGTTTGACTAAACTTTTCTTTGCTGTTTTTTAAATTATATGTCTCCTCTTTTGCCGTTCAAGTGAATATCGTGGTGTTTGAAGAGGGAGATGAGAGATTTTAGATCGATTTCTGGGTTACTTTTCCTTGAACATTGTTATGTATGAGATTCATCTTCTGATATGAGGATGTGTTCTCTTCTGTATCATTTCATTTAATCGATGGAATTGTTTGCATATGGAGCTTTAGGTTCTATGTATGGCCTTAGTGATTTCAGTTAAATGAGAATATTTTTGCGATTGTAGCTTAAAATGGTAAATATTTTGTTCTTCGAGCTGCCCTCCCCGATTTTTGGTTTAATTATTTACTATAATCGTCTTTGATCAGGATGAAACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCGCAAAGAGTTGGAGCCCCATTGCCACAATATACAACGTTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACATTTACTGGAGAACCAGCCAAGAACAAAAAACAGGCAGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATGTGAGTTTTTTTTTTTTTAATGCCTACCTTGTATAACTATTATCCAGTGAAAAGAGAGAATAGACCATCTTATTTTGTGCATATTTTGTGCATATTTTGTGCAAGTTAATGGTATGCAACCCGTATATGATGTTATTATATGCTCGAACATGTAGATTAGCGTTCAAACGATTCCTCTGCGACATGTTGATGCCAATGGTCTTTATTATATCGCCTAAATTTCCTATGGAAGCTAAATATCCTATGCCTGATGTGCTTATGGCATGCTTAAAAATTAAATATTTTTCCTTCATCGGTTTTTCTTGTGCGAGTCTGAGAGAACACACCATGGAATTCCTTCTAATAGATAATATCAATTGCGAACACTCCTTGTTGTGATTCAAAGTTGCCATAAGTTTATTCTAAGAATATTCTTATCTTATCATGGTGCCTATTTATTATATATATTCTGGTGTTGAGCTAACATTTTGTTTTAATTTTGGCTAGTGGCTAAGCAATCAGCGAGCTCGTCATCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACGATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCCATGTCGAATCCAAATGCAACAATACCATTCCCCAAAAGACTTCATATTCAAAGTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCACCAACATCAAAAATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCGCCATTTTCTGCAAATAAAATCCTTGTTCCACAATCCCCAACTTCTGCAGTAGAAGGCTCTGGAACCTGCCCCCAGAAGTTTAGTGCCGGAGCTGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGGCATCTTGCCGTGGTATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCAGCCCCGCCTCTACCGCAACCATCGAAGCTACCTCCACAGCAAGTAATTCGAGTCCCACCTGTATGTATTGCCCCACCCGTTTCTATTAGGCAAGCGATACCTGCTTTTGCTGCTCCCCCAGTACGCAAGGAAAGTCCTGTAGTTAAAAATGAAGATTGTCCAGCTTCAACTGCTCCAAAGGAAGAGCCTCCTGCTCCTTCCGCACCCACACAGCCTACTAAATCACCTGCTGGAGTAGAAGAACAAGCTACAACCACAATGGCAAACAGTCAGCAAGAAATTAAGACATTAGAGAACCTCGAACAACTCCAAATTTGATGAGTTGAATCATTAGAAAGACCACATAGGAGATCGTCGTATTGTTTTGCAGTAAAGTTAGGTTATCTCATCTCGTCCGCATCTTAGTTTGAGTGTCAACCTTTTTTCTTTTCATCTTTTTTGCCCTGTTTTGTTCAAACTTGAGTTTAGAGGTGGAAAGGTTGGTATCAGCATCCCTGCAGCAGCAATGCCATTCATCAGCAACTGTGTCAACT

mRNA sequence

GGAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTAATTTGTGAAGTGAGTGGAAGGAGGAGTGAAGCGGTGCTGAGACTGAATCGGAGCGGAAATGTACAAGAACCAGCTTCAAGAGCTGGCACAGAGGAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACGGTTAACTTCAATGGCGAGGTCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGTCAGGCTGAGCACTCCGCGGCTGAGGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCACTTGCGGCTAGGATACTGGATGAAACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCGCAAAGAGTTGGAGCCCCATTGCCACAATATACAACGTTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACATTTACTGGAGAACCAGCCAAGAACAAAAAACAGGCAGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAGCAATCAGCGAGCTCGTCATCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACGATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCCATGTCGAATCCAAATGCAACAATACCATTCCCCAAAAGACTTCATATTCAAAGTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCACCAACATCAAAAATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCGCCATTTTCTGCAAATAAAATCCTTGTTCCACAATCCCCAACTTCTGCAGTAGAAGGCTCTGGAACCTGCCCCCAGAAGTTTAGTGCCGGAGCTGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGGCATCTTGCCGTGGTATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCAGCCCCGCCTCTACCGCAACCATCGAAGCTACCTCCACAGCAAGTAATTCGAGTCCCACCTGTATGTATTGCCCCACCCGTTTCTATTAGGCAAGCGATACCTGCTTTTGCTGCTCCCCCAGTACGCAAGGAAAGTCCTGTAGTTAAAAATGAAGATTGTCCAGCTTCAACTGCTCCAAAGGAAGAGCCTCCTGCTCCTTCCGCACCCACACAGCCTACTAAATCACCTGCTGGAGTAGAAGAACAAGCTACAACCACAATGGCAAACAGTCAGCAAGAAATTAAGACATTAGAGAACCTCGAACAACTCCAAATTTGATGAGTTGAATCATTAGAAAGACCACATAGGAGATCGTCGTATTGTTTTGCAGTAAAGTTAGGTTATCTCATCTCGTCCGCATCTTAGTTTGAGTGTCAACCTTTTTTCTTTTCATCTTTTTTGCCCTGTTTTGTTCAAACTTGAGTTTAGAGGTGGAAAGGTTGGTATCAGCATCCCTGCAGCAGCAATGCCATTCATCAGCAACTGTGTCAACT

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCACAGAGGAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTTAAAGCTACGGTTAACTTCAATGGCGAGGTCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGTCAGGCTGAGCACTCCGCGGCTGAGGTTGCCTTGAACGCTCTCTCTAACCGTGGTCCTCCTCATTCACTTGCGGCTAGGATACTGGATGAAACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCGCAAAGAGTTGGAGCCCCATTGCCACAATATACAACGTTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACATTTACTGGAGAACCAGCCAAGAACAAAAAACAGGCAGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAGCAATCAGCGAGCTCGTCATCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACGATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCCATGTCGAATCCAAATGCAACAATACCATTCCCCAAAAGACTTCATATTCAAAGTCCAAGGCCAACTAGTCCCCAACGTCCCCCTGCACCAACATCAAAAATTCTTCCCTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCGCCATTTTCTGCAAATAAAATCCTTGTTCCACAATCCCCAACTTCTGCAGTAGAAGGCTCTGGAACCTGCCCCCAGAAGTTTAGTGCCGGAGCTGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGGCATCTTGCCGTGGTATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCAGCCCCGCCTCTACCGCAACCATCGAAGCTACCTCCACAGCAAGTAATTCGAGTCCCACCTGTATGTATTGCCCCACCCGTTTCTATTAGGCAAGCGATACCTGCTTTTGCTGCTCCCCCAGTACGCAAGGAAAGTCCTGTAGTTAAAAATGAAGATTGTCCAGCTTCAACTGCTCCAAAGGAAGAGCCTCCTGCTCCTTCCGCACCCACACAGCCTACTAAATCACCTGCTGGAGTAGAAGAACAAGCTACAACCACAATGGCAAACAGTCAGCAAGAAATTAAGACATTAGAGAACCTCGAACAACTCCAAATTTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSAAEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIARALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPVYSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI

Homology

[Close]

BLAST of Carg27563 vs. NCBI nr
Match: KAG6586020.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020796.1 Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 782.7 bits (2020), Expect = 1.5e-222
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTA 360
           YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTA 360

Query: 361 PKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           PKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI
Sbjct: 361 PKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 407

[Close]

BLAST of Carg27563 vs. NCBI nr
Match: XP_022937551.1 (double-stranded RNA-binding protein 2-like [Cucurbita moschata])

HSP 1 Score: 770.8 bits (1989), Expect = 6.0e-219
Identity = 402/407 (98.77%), Postives = 404/407 (99.26%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKIL+PQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTA 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQAIPAFAAPPVRKESPVVK EDCPASTA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPAFAAPPVRKESPVVKKEDCPASTA 360

Query: 361 PKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           PKEEPPAPSAP+QPTKSPA VEEQATTTMANSQQEIKTLENLEQLQI
Sbjct: 361 PKEEPPAPSAPSQPTKSPAEVEEQATTTMANSQQEIKTLENLEQLQI 407

[Close]

BLAST of Carg27563 vs. NCBI nr
Match: XP_023538476.1 (double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 758.8 bits (1958), Expect = 2.3e-215
Identity = 397/408 (97.30%), Postives = 402/408 (98.53%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFP+RLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPRRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKIL+PQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           YSAPPLPQPSKLPPQQV RVPPV IAPPVSIRQAIPAFAAPP+RKES PVVK EDCPAST
Sbjct: 301 YSAPPLPQPSKLPPQQVTRVPPVRIAPPVSIRQAIPAFAAPPLRKESPPVVKKEDCPAST 360

Query: 361 APKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           APKEEPPAP AP+QPTKSPA VEEQATTTM+NSQQEIKTLENLEQLQI
Sbjct: 361 APKEEPPAPPAPSQPTKSPAEVEEQATTTMSNSQQEIKTLENLEQLQI 408

[Close]

BLAST of Carg27563 vs. NCBI nr
Match: XP_022969656.1 (double-stranded RNA-binding protein 2-like [Cucurbita maxima])

HSP 1 Score: 754.6 bits (1947), Expect = 4.4e-214
Identity = 398/409 (97.31%), Postives = 402/409 (98.29%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPK+LHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKIL+PQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQAIPAFAAPP RKES PV+K EDCPAST
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPAFAAPPARKESPPVLKKEDCPAST 360

Query: 361 APKEEPPAPSAPTQPTKS-PAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           A KEEPPAPSAP+QPTKS PA VEEQATTTMANSQQEIKTLENLEQLQI
Sbjct: 361 ASKEEPPAPSAPSQPTKSPPAEVEEQATTTMANSQQEIKTLENLEQLQI 409

[Close]

BLAST of Carg27563 vs. NCBI nr
Match: XP_022152917.1 (double-stranded RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 695.3 bits (1793), Expect = 3.2e-196
Identity = 370/408 (90.69%), Postives = 382/408 (93.63%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK+SASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPK+L IQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFS NKI +PQS T A+EGSGT PQKFSAGAALSYIPV QFR SC GIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQA+P FAAPPVRKE+ PVV+ ED PA  
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKEDFPA-- 360

Query: 361 APKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           APKE+PP   AP+ PT SPA V EQATT +ANSQQE KTLENLEQL+I
Sbjct: 361 APKEDPPVIPAPSPPTTSPAEV-EQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Carg27563 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.7e-123
Identity = 262/419 (62.53%), Postives = 304/419 (72.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAK+++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF K+  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKILVPQSPTSAVEG-SGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAM 300
               A    + +   +A+E  S   PQ+  A     Y+P++QFR+ C G+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVCIAPPVSIRQAIPAFA-APPVRKES 360
           PV+SAPP+P P     ++LP     P  +   PPV IAPPV+IR A+P FA APPVR  +
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 ---PVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLE 404
              P V+  +   S+  ++E    S P  P     GVE    T     +   K  E  E
Sbjct: 361 AVKPTVEAGETRISSVQEKE----SIPVLPDSLEIGVEGSTITITDCEKTASKETERAE 413

[Close]

BLAST of Carg27563 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.5e-108
Identity = 230/378 (60.85%), Postives = 268/378 (70.90%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+YTC+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAGITFTG+PAKNKKQAEKNAA AAWS+L+QL +Q ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTS-PQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEKMAM+N     PFPK+  +Q  R T+ PQ   +  SKILPL   K+  RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 APFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMP 300
               A      Q+P    E S     +F A  A  Y+PV  FR  C  +APPVT+RT++P
Sbjct: 241 PESPAASDAASQTPFRPTE-SPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSIP 300

Query: 301 VYSAPPLPQP----SKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDC 360
           V+SAPPLP P     +LPP  +   PP+ +A PV IR A P F    V+   P++  +  
Sbjct: 301 VFSAPPLPPPGARTQQLPP-LMSHPPPIRMASPVRIRPAPPLFTPSAVQGPKPMMPVQIK 360

Query: 361 PASTAPKEEPPAPSAPTQ 374
                  +E  +P  P Q
Sbjct: 361 DVQHQQIKETRSPVMPVQ 376

[Close]

BLAST of Carg27563 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.2e-67
Identity = 161/343 (46.94%), Postives = 203/343 (59.18%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGE+FE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFPKRLHIQSPRPTS----------- 240
            L  ++ KE                  SN +  I   + +++ + + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKILVPQSPTSAVEGSGTCPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S     E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGAALSYIPVQQFRASCRGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     +   +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of Carg27563 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.4e-66
Identity = 187/417 (44.84%), Postives = 225/417 (53.96%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK--QSASSSSEPE-NNDELEQIT 180
             VELAG+TFTG P K KKQA+KNAAMAAWS LKQL +  + +SSS  P+ ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNY---------RQKEKMAMSN---------PNATIPFPKRLHIQSPRPTSPQRP 240
           +AR L +          +QKEK   SN         P +   F  RLH+Q  +   P  P
Sbjct: 181 VARTLASLNQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNASFYGRLHLQ--KHAYPSVP 240

Query: 241 PAPTSKILPLICQKAAPRSRAPF--SANKILVPQSPT-----SAVEGSGTCPQKFSAGAA 300
           P      +    Q    +   P   +      P  PT         G  T P   S+   
Sbjct: 241 PEQAMYHMWHQVQATQQKPHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTMP---SSQDG 300

Query: 301 LSYIPVQQFRASCRGIAPPVTIR--TAMPVYSAPPLPQP--------SKLPPQQVIRVPP 360
           L  IP       C   A PV  R  +  P    P  P P         +L    ++ +P 
Sbjct: 301 LGLIP-------CYPEASPVLPRYFSPYPASFVPRRPLPVNVHKIHEKRLVGADMVELPD 360

Query: 361 VCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTAPKEEPPAPSAPTQPTKSPA 380
                 V  R   P F+           K E   +S A ++E  + +A +  T+SP+
Sbjct: 361 AA----VFSRYTAPDFSGTSENAVQDNKKEEYTESSPASEQESKSHTASSSATRSPS 401

[Close]

BLAST of Carg27563 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.4e-63
Identity = 179/416 (43.03%), Postives = 224/416 (53.85%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGE+FE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    +R  I++ R    Q     T+    L+C+K       
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLR----- 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKF---SAGAALSYIPVQQFRASCRGIA-------- 300
             S N        T+    S   PQ+F             V+     C+  A        
Sbjct: 241 --SINLY------TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDD 300

Query: 301 --PPVTIRTA--MPVYSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRK 360
             P + I+T+   P+ S+      SKL P     +    +AP V IR  IP  +APP   
Sbjct: 301 PKPEMRIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP--- 359

Query: 361 ESPVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLEN 402
                          PK  P        P  SP       T  + N  QE K+L N
Sbjct: 361 ---------------PKPNP-------NPNSSPF-----ITRELGNGSQEKKSLPN 359

[Close]

BLAST of Carg27563 vs. ExPASy TrEMBL
Match: A0A6J1FAM9 (double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111443925 PE=4 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 2.9e-219
Identity = 402/407 (98.77%), Postives = 404/407 (99.26%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKIL+PQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKESPVVKNEDCPASTA 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQAIPAFAAPPVRKESPVVK EDCPASTA
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPAFAAPPVRKESPVVKKEDCPASTA 360

Query: 361 PKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           PKEEPPAPSAP+QPTKSPA VEEQATTTMANSQQEIKTLENLEQLQI
Sbjct: 361 PKEEPPAPSAPSQPTKSPAEVEEQATTTMANSQQEIKTLENLEQLQI 407

[Close]

BLAST of Carg27563 vs. ExPASy TrEMBL
Match: A0A6J1HYF1 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468613 PE=4 SV=1)

HSP 1 Score: 754.6 bits (1947), Expect = 2.1e-214
Identity = 398/409 (97.31%), Postives = 402/409 (98.29%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPK+LHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKIL+PQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQAIPAFAAPP RKES PV+K EDCPAST
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPAFAAPPARKESPPVLKKEDCPAST 360

Query: 361 APKEEPPAPSAPTQPTKS-PAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           A KEEPPAPSAP+QPTKS PA VEEQATTTMANSQQEIKTLENLEQLQI
Sbjct: 361 ASKEEPPAPSAPSQPTKSPPAEVEEQATTTMANSQQEIKTLENLEQLQI 409

[Close]

BLAST of Carg27563 vs. ExPASy TrEMBL
Match: A0A6J1DHJ7 (double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111020530 PE=4 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 1.5e-196
Identity = 370/408 (90.69%), Postives = 382/408 (93.63%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK+SASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPK+L IQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFS NKI +PQS T A+EGSGT PQKFSAGAALSYIPV QFR SC GIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           YSAPPLPQPSKLPPQQVIRVPPV IAPPVSIRQA+P FAAPPVRKE+ PVV+ ED PA  
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPPVRKENPPVVRKEDFPA-- 360

Query: 361 APKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           APKE+PP   AP+ PT SPA V EQATT +ANSQQE KTLENLEQL+I
Sbjct: 361 APKEDPPVIPAPSPPTTSPAEV-EQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Carg27563 vs. ExPASy TrEMBL
Match: A0A0A0LSF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.4e-192
Identity = 362/414 (87.44%), Postives = 379/414 (91.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK+SASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF K+L IQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300
           PFSANKI +PQS T A+EGSG  PQKFSAG ALSYIPVQQFR SC GIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKES-PVVKNEDCPAST 360
           +SAPPLPQPSKLPPQQVIRVPP+ IAPPVSIRQAIP FAAPPVRKE+ PVVK E+CPA  
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKEEPPAPSA------PTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
           APKE+PPA SA      P+ PT       EQAT T+ NS +E KTLENLE+L+I
Sbjct: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Carg27563 vs. ExPASy TrEMBL
Match: A0A6J1I2I8 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469315 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.5e-191
Identity = 365/411 (88.81%), Postives = 380/411 (92.46%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE+FECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAK+SASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPK+L IQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKILVPQSPTSAVEGSGT-CPQKFSAG-AALSYIPVQQFRASCRGIAPPVTIRTAM 300
           PFSANKI +P + TSA+EGS T  PQKFSAG AALSYIPV Q+R SC GIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRKE-SPVVKNEDCPA 360
           PVYSAPPLPQP KLPPQQVIRVPPV IAPPVSIRQAIP FAAPPVRKE +P VK EDCPA
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVRKENAPAVKKEDCPA 360

Query: 361 STAPKEEPPAPS-APTQPTKSPAGVEEQATTTMANSQQEIKTLENLEQLQI 408
            TAPKE   AP+  PT PT+SPA V EQ TTT+ NS+QE KTLENLE+L+I
Sbjct: 361 PTAPKENLAAPAPVPTPPTESPAEV-EQDTTTLVNSRQETKTLENLEELKI 410

[Close]

BLAST of Carg27563 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 443.0 bits (1138), Expect = 2.7e-124
Identity = 262/419 (62.53%), Postives = 304/419 (72.55%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAK+++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF K+  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKILVPQSPTSAVEG-SGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAM 300
               A    + +   +A+E  S   PQ+  A     Y+P++QFR+ C G+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVCIAPPVSIRQAIPAFA-APPVRKES 360
           PV+SAPP+P P     ++LP     P  +   PPV IAPPV+IR A+P FA APPVR  +
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 ---PVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLENLE 404
              P V+  +   S+  ++E    S P  P     GVE    T     +   K  E  E
Sbjct: 361 AVKPTVEAGETRISSVQEKE----SIPVLPDSLEIGVEGSTITITDCEKTASKETERAE 413

[Close]

BLAST of Carg27563 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-68
Identity = 161/343 (46.94%), Postives = 203/343 (59.18%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGE+FE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFPKRLHIQSPRPTS----------- 240
            L  ++ KE                  SN +  I   + +++ + + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKILVPQSPTSAVEGSGTCPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S     E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGAALSYIPVQQFRASCRGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     +   +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of Carg27563 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-64
Identity = 179/416 (43.03%), Postives = 224/416 (53.85%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGE+FE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    +R  I++ R    Q     T+    L+C+K       
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLR----- 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKF---SAGAALSYIPVQQFRASCRGIA-------- 300
             S N        T+    S   PQ+F             V+     C+  A        
Sbjct: 241 --SINLY------TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDD 300

Query: 301 --PPVTIRTA--MPVYSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRK 360
             P + I+T+   P+ S+      SKL P     +    +AP V IR  IP  +APP   
Sbjct: 301 PKPEMRIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP--- 359

Query: 361 ESPVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLEN 402
                          PK  P        P  SP       T  + N  QE K+L N
Sbjct: 361 ---------------PKPNP-------NPNSSPF-----ITRELGNGSQEKKSLPN 359

[Close]

BLAST of Carg27563 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 243.4 bits (620), Expect = 3.1e-64
Identity = 179/416 (43.03%), Postives = 224/416 (53.85%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGE+FE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKRLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    +R  I++ R    Q     T+    L+C+K       
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLR----- 240

Query: 241 PFSANKILVPQSPTSAVEGSGTCPQKF---SAGAALSYIPVQQFRASCRGIA-------- 300
             S N        T+    S   PQ+F             V+     C+  A        
Sbjct: 241 --SINLY------TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDD 300

Query: 301 --PPVTIRTA--MPVYSAPPLPQPSKLPPQQVIRVPPVCIAPPVSIRQAIPAFAAPPVRK 360
             P + I+T+   P+ S+      SKL P     +    +AP V IR  IP  +APP   
Sbjct: 301 PKPEMRIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP--- 359

Query: 361 ESPVVKNEDCPASTAPKEEPPAPSAPTQPTKSPAGVEEQATTTMANSQQEIKTLEN 402
                          PK  P        P  SP       T  + N  QE K+L N
Sbjct: 361 ---------------PKPNP-------NPNSSPF-----ITRELGNGSQEKKSLPN 359

[Close]

BLAST of Carg27563 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-29
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDE 173
             VE AG  F+GE AK KK AE +AA  A+ ++K        S + P    E
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQE 167

The following BLAST results are available for this feature:

BLAST of Carg27563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586020.1	1.5e-222	100.00	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022937551.1	6.0e-219	98.77	double-stranded RNA-binding protein 2-like [Cucurbita moschata]	[more]
XP_023538476.1	2.3e-215	97.30	double-stranded RNA-binding protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969656.1	4.4e-214	97.31	double-stranded RNA-binding protein 2-like [Cucurbita maxima]	[more]
XP_022152917.1	3.2e-196	90.69	double-stranded RNA-binding protein 2-like [Momordica charantia]	[more]

BLAST of Carg27563 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	3.7e-123	62.53	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	1.5e-108	60.85	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8GY79	2.2e-67	46.94	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]
Q0DKP4	9.4e-66	44.84	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LJF5	4.4e-63	43.03	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]

BLAST of Carg27563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAM9	2.9e-219	98.77	double-stranded RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HYF1	2.1e-214	97.31	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DHJ7	1.5e-196	90.69	double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LSF2	1.4e-192	87.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1	[more]
A0A6J1I2I8	1.5e-191	88.81	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Carg27563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	2.7e-124	62.53	dsRNA-binding protein 2	[more]
AT5G41070.1	1.6e-68	46.94	dsRNA-binding protein 5	[more]
AT3G26932.1	3.1e-64	43.03	dsRNA-binding protein 3	[more]
AT3G26932.2	3.1e-64	43.03	dsRNA-binding protein 3	[more]
AT3G62800.1	4.2e-29	42.44	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 382..402
None	No IPR available	GENE3D	3.30.160.20		coord: 81..161 e-value: 2.2E-20 score: 74.7
None	No IPR available	GENE3D	3.30.160.20		coord: 1..68 e-value: 6.7E-23 score: 82.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..391
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..402
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..402
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..157
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..69
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 4.0E-20 score: 82.9 coord: 88..154 e-value: 2.8E-19 score: 80.1
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 2..68 e-value: 1.3E-15 score: 57.8 coord: 88..152 e-value: 1.5E-11 score: 44.9
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 10.994328
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 11.96538
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 1.58811E-37 score: 128.751
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 2.97057E-41 score: 138.378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27563-RA	Carg27563-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in gene silencing by small RNA
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding