Carg27192 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAATTTCTGTGTCTGGTTCTTTTAGTTGGTAATTTTTGCCACTTCGTGTTAGCTGACCAGATCTTCCCAGCTCAATTAGGTGAAATTCTTATCCAAATTCTCTCTTTCTGTAACTTTTTATTGACAAGTTGCGAAACAGATATCCTCTTTAGGCGTATAATCTTGATTCATGAATTTTTAATTAGTTAATTTTTGTTTTGAATTCAGTATTTAGAAATGGTTTTCCAGACTATCTTCCTTTATTATTAAGTTTAGAGTTTTCTGCTTCTTATTGATTGAAGTTATGCCACTCGGATTGCGAACTCTGAATCTAAATCGTAGGATTATGTGTTGGCGGGCTGATATTCTATAAGTTGTTTAACATTCGGTTTGGCATACGTTATGAGAATTTGAAACATCAAAATGTAGGGCGTACCATCTTTACATTTATTGTATTTGCTCATCATTGCAATAGCTAGTTAATATGAAATTTTGTTATCCCCTCTTTCTGATTGATGATTAGCAGGTGGTACATTTAGTCGCAACTCTCGTGGACCGAAATACAATATTGAATTCCATCCAGAGGACTCGCCTTACAACCCGGTAAGCTTTATAATGAACTTAGTTGTTGATTCTTGGTATTATTTGGATCCTATTCACCCATAGGATGTAAATAGATGGGGATTTTTTGGGTCTTTGGCATTTTTCCTCCTCCTCTCTTGTTAGGTCGGAGTGTAGTATAACTTTACAAAGTTAAAGATGATAGACTGTGGGCATTTCTCCACACCTTCATTAGTCAATCTCTAGTTATCTTATTTTGTTGTTTCTTTTTTTAAATTTATCATCATATGTTCTCTCTGTTGGCCTAATCTGATTTTTGTACCTTACATTGTTTCCCACTCTCTGAAATGTATTCATCAGTTGCCTTCTTTCTCTAAGGGGATTGGAGGAAGGGCTTTGAAGATTGATAGTTGATTATTTTGACACGATTAAAAACAATAAATAAATAAGAAGTTCTCTGTGTACAGTGATCCATGACACCAAATTTTGAAGCAAACTAAAATTGTAGTTTCATCCTTATGGTATCAAGCAATTGGAATAATTGGTTTGTAAATGATTTCTTGAACTCCAAGAACCTCCTAGACGGCCAACATGTGATTAGTCTGTAAGATGCACTGTGGAAGAAGAGATGGGAAGGTGGACTCTGTGTGCATTGTTTTCTTAAATGCTTGATAATTAAATCATTGTATGCGCTCAGTTCTGCTGCAAATGTATGTGGGAACTTAAAGCTCCTTCTCTATGCATGAAATTTTATTGTTTTAATGTTTAGTTTCAGTAACCTTTTTCTTGTACTAGACTTCATACAAAAACTTTCTTTTCTACACTGTATGATATCTGACTTCATAATTCAAGAATAAGGAAGTATGCATATGCCATCTGAAATCTCTATGTTTTTTATGACTTTGCAGGATGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACATGTGCTTCTTGCCTAAGATGGAGAAGTCCAAGAGTGGAAAACCAGCTATTCAGGTGAACGTGAGTAGCATGATTGTGGAATCTGAGAAGCGTGTCAAATTGAAGACTCCAGATGAGCTGCTTGAAGCATTAAAAGAGCAATGTTTTGTCAGGGTTAGGATCTATCACTAAATATTGCTTTGCATGCATCTGATGACTATATTGTCGATGTTTTAAAATCATATCTCGAAAGAAAAGTAGAGTTGTAAGTAGTTTTTTTAGTGTGAGTTCCTTGAGAAATCAGGCATCAAGCAAAAAGTTAAAGACGATAAGGTATTTTCTTCTTTCATTTTTAAAAATAATATGTGTTCGAAGTATATGACATGTTTAAAAAATATAAGTGAAGTGTATGCTTTGAGGCAGTCCTGCCTCACATGAGACAAGATGCCTTTGTTGCGGTCAACATTCATGCTATTTAAAACTAGGGCCAATTGTGGTAAAATATATGCATTTTAGGTAAAACAAGTGATGATTATGTTATGAACAATTGACATGTTTGCCTTGCATCATCAACTTCTTTTCGCAGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTACGACAATTTCACTTGGAGGATGATAAGGTAGTCTCCTTGAGTGTCTTCTAATGCTTTCTTTATGCGATTCTCTAATCTCTGTGTATGAAATGGGGGACTGGTGTTAATATTCTTAAAGGAGATTGTTTTATTAGCTTATGTTTCAGGAGGCCACGGTTACGGTTTATAGCTTAATTAAAAACATAAAACAATGCCCTGCCATTTTAAGTAGTGAAGACTTCGAAGTATCTGGCGTATTGTTTTGCAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGCAACGGCTAATCTCCATGAGAATCTCTCTGATGTATCTACTTTGAAGGATCCTCGCTCGAAAGATGCATCCCAAAGGTTTGCTTTTACTTTCATTAGTTACCAGTTAAGAAATTATGAACAGACTTTAAGTTACAGGCAAAGACCAACTATCGAAAAACACTAAAGCTTGTAATTTTCCTATTTCTACCACTTCTCAAATTAGTAAGTTGGAGGGATACGTGGAAACAGAAACTTGTGTGAGTTTTCATCCGGCATTCTACTATGGGTCTGACTTTGAGTTTCTTTAATTGTCAATTCTTACATGTGTCAAATATGACATTCAGACATGAAATATGAAGAAAAGCTCGTATGAGTTTAGTGTTTGGATCCCATAGATCCTGTATAGTTAGCAAGGTTTTCTTTTGGCGCCTCTCCCCACATGTCAAATTCTCAAAGTAATATGAAGCTACGTGACTCATTCAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTAACAAATCAACCACGAGAAACTGAGGTACAAAGTAATCAATAATTTTCTGTCACTTTTTTCTTTCTTTTTCTCCTCATTACCACTTTTGATTCTTAATTTCATTGCAGGTTAGATTTGTTTGCTCGGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCTCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTAAATCTCTCCCTCTCTCCCTCTCTCTCTCTTTTTTCTTATACCTACACAAAAACATCCATTGTGCTCATTATTAGCTGAAATAGAACACGATGAAATGAAGTGTTACTGGCACAAGTTTGTGATAAGTATTTGTTTAGACTATCAACAAAGCTGCCAGTTATTACAATTTACAAGAGAATCGAACCACTTTAAAGAACAACCTGCTCTCATCTAAACCGATTGAGTAGCTATAAAAGTGTTCACGAGCCAACCAAAAGGATCCAACTTAAAAGAGTTCAACATCAAGATGTAAATTTAATTCATCGATATAGTTTCCATTTCTCTTATCCGATCATTTTGTTTTGAGGCAGGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCAGAAGATTACAAGGAAACAGAGCAGACTGAAGAATTAGATGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCGGACGAGTGA ATGAGGAAATTTCTGTGTCTGGTTCTTTTAGTTGGTGGTACATTTAGTCGCAACTCTCGTGGACCGAAATACAATATTGAATTCCATCCAGAGGACTCGCCTTACAACCCGGATGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACATGTGCTTCTTGCCTAAGATGGAGAAGTCCAAGAGTGGAAAACCAGCTATTCAGGTGAACGTGAGTAGCATGATTGTGGAATCTGAGAAGCGTGTCAAATTGAAGACTCCAGATGAGCTGCTTGAAGCATTAAAAGAGCAATGTTTTGTCAGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTACGACAATTTCACTTGGAGGATGATAAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGCAACGGCTAATCTCCATGAGAATCTCTCTGATGTATCTACTTTGAAGGATCCTCGCTCGAAAGATGCATCCCAAAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTAACAAATCAACCACGAGAAACTGAGGTTAGATTTGTTTGCTCGGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCTCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCAGAAGATTACAAGGAAACAGAGCAGACTGAAGAATTAGATGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCGGACGAGTGA ATGAGGAAATTTCTGTGTCTGGTTCTTTTAGTTGGTGGTACATTTAGTCGCAACTCTCGTGGACCGAAATACAATATTGAATTCCATCCAGAGGACTCGCCTTACAACCCGGATGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACATGTGCTTCTTGCCTAAGATGGAGAAGTCCAAGAGTGGAAAACCAGCTATTCAGGTGAACGTGAGTAGCATGATTGTGGAATCTGAGAAGCGTGTCAAATTGAAGACTCCAGATGAGCTGCTTGAAGCATTAAAAGAGCAATGTTTTGTCAGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTACGACAATTTCACTTGGAGGATGATAAGGTAGTTCAGGAGTTTGTATTGGGTGTCTATGATGCAGAGGCAACGGCTAATCTCCATGAGAATCTCTCTGATGTATCTACTTTGAAGGATCCTCGCTCGAAAGATGCATCCCAAAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTAACAAATCAACCACGAGAAACTGAGGTTAGATTTGTTTGCTCGGAGCCCAGAGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCTCTTACAGTGCGATGCCCAACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACACCATTAACTGCAACGTGCTCCCAGAAGATTACAAGGAAACAGAGCAGACTGAAGAATTAGATGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCGGACGAGTGA MRKFLCLVLLVGGTFSRNSRGPKYNIEFHPEDSPYNPDDDQESVFMPNKNGKNYMCFLPKMEKSKSGKPAIQVNVSSMIVESEKRVKLKTPDELLEALKEQCFVRQEGWWTYEFCYQKTLRQFHLEDDKVVQEFVLGVYDAEATANLHENLSDVSTLKDPRSKDASQRYHAHHYTNGTMCDLTNQPRETEVRFVCSEPRAMINSITELSTCKYALTVRCPTLCKHPLFQEERPVWYTINCNVLPEDYKETEQTEELDDEIVMVTDVKYPKNESDE Homology
BLAST of Carg27192 vs. NCBI nr
Match: KAG7021752.1 (Protein OS-9-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 568.9 bits (1465), Expect = 2.3e-158 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Carg27192 vs. NCBI nr
Match: KAG6587864.1 (Protein OS-9-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 557.0 bits (1434), Expect = 9.2e-155 Identity = 274/292 (93.84%), Postives = 275/292 (94.18%), Query Frame = 0
BLAST of Carg27192 vs. NCBI nr
Match: XP_023530346.1 (protein OS-9 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 550.4 bits (1417), Expect = 8.6e-153 Identity = 272/292 (93.15%), Postives = 273/292 (93.49%), Query Frame = 0
BLAST of Carg27192 vs. NCBI nr
Match: XP_022932897.1 (protein OS-9 homolog [Cucurbita moschata]) HSP 1 Score: 548.9 bits (1413), Expect = 2.5e-152 Identity = 271/292 (92.81%), Postives = 273/292 (93.49%), Query Frame = 0
BLAST of Carg27192 vs. NCBI nr
Match: XP_022968771.1 (protein OS-9 homolog [Cucurbita maxima]) HSP 1 Score: 544.3 bits (1401), Expect = 6.1e-151 Identity = 267/292 (91.44%), Postives = 272/292 (93.15%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy Swiss-Prot
Match: Q8GWH3 (Protein OS-9 homolog OS=Arabidopsis thaliana OX=3702 GN=OS9 PE=1 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 5.2e-84 Identity = 151/256 (58.98%), Postives = 197/256 (76.95%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy Swiss-Prot
Match: Q67WM9 (Protein OS-9 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=OS9 PE=2 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74 Identity = 137/252 (54.37%), Postives = 184/252 (73.02%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy Swiss-Prot
Match: Q13438 (Protein OS-9 OS=Homo sapiens OX=9606 GN=OS9 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.6e-21 Identity = 76/250 (30.40%), Postives = 117/250 (46.80%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy Swiss-Prot
Match: Q3MHX6 (Protein OS-9 OS=Bos taurus OX=9913 GN=OS9 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.1e-21 Identity = 73/229 (31.88%), Postives = 109/229 (47.60%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy Swiss-Prot
Match: Q8K2C7 (Protein OS-9 OS=Mus musculus OX=10090 GN=Os9 PE=1 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20 Identity = 65/189 (34.39%), Postives = 101/189 (53.44%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy TrEMBL
Match: A0A6J1EY24 (protein OS-9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439427 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.2e-152 Identity = 271/292 (92.81%), Postives = 273/292 (93.49%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy TrEMBL
Match: A0A6J1HVT6 (protein OS-9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467906 PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 3.0e-151 Identity = 267/292 (91.44%), Postives = 272/292 (93.15%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy TrEMBL
Match: A0A6J1C180 (protein OS-9 homolog OS=Momordica charantia OX=3673 GN=LOC111007445 PE=4 SV=1) HSP 1 Score: 517.7 bits (1332), Expect = 3.0e-143 Identity = 245/292 (83.90%), Postives = 272/292 (93.15%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy TrEMBL
Match: A0A6J1HCF9 (protein OS-9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461566 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 4.8e-141 Identity = 249/292 (85.27%), Postives = 267/292 (91.44%), Query Frame = 0
BLAST of Carg27192 vs. ExPASy TrEMBL
Match: A0A6J1JFF3 (protein OS-9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485248 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 5.8e-139 Identity = 245/292 (83.90%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Carg27192 vs. TAIR 10
Match: AT5G35080.1 (INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 312.4 bits (799), Expect = 3.7e-85 Identity = 151/256 (58.98%), Postives = 197/256 (76.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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