Carg26997 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg26997
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr11: 9037852 .. 9038952 (+)
RNA-Seq ExpressionCarg26997
SyntenyCarg26997
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATGCCTTGGAGTAAAATTGCTGCCATTGTTGATAGCATGAAGAGTTCCGGGGTTGCCCCAGATTTGTGTACATATAATACGCTTATTAGCAGTTGTTGCAGAGGGTCATTGTATAAAGAAGCAGCAAAGGTGTTTGAAGAAATGGAAGCAGCTGGGTTTAGTCCTGATAAAGGTTACTTACAACGCGTTGTTGGATGTGTATGGGAAGTCTCGACGGCCTAAGGAAGCAATGGAGGTTTTGAAGGAGATGGAATCGAGCCGTTTTGCGCCAAGTATTGTGAGTTATAATTCATTGATATCTGCTTATGCGCGGGACGGTTTGTTAGATGAAGCTATGGAGCTAAAAAGACAGATGATGGAGAAGGGGATTGAGCATGATGTTTTTACTTACACGACGTTGTTGTCTGGTTTCGAGAAGACGGGAAAGGACGATTGTGCGATGAGAGTATTTGATGAGATGAGAGTTGCAGGGTGCCAACCGAATATATGCGCATTCAATGTGTTGATTAAGCTGCACGGTAAGAGGGGGAATTTCGTGGAGATGATGAAGGTTTTCAAGGAGATTAAGGTATGCGAGTTTGCGCCTAATATTGTTACTTGGAACACACTTTTGACCGTGTCTGGGCAAAATGGGATGGATTGTGAGATCTCACGAGTGTTCAGAGAGATGGAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGATTTTAGTAGATGTGGTTCGTTCGACCAAGTCATGGCTATCTATCGAAGAATGTTGGATGCTGGGTTCGCTTCGATCTGCCGACGTACAATACCGTTTTAGCATCCTTGGCTCGGAGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAATGAGTTAACGTATTGTTCTTTACTGCATGCTTATGTCAATGGCAAAGAGATCCGGCGGGTGTCTGCACATGCTGAGGAAATCTATGCCAGCATTATTGAACCTCAAGCTATGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGTAG

mRNA sequence

ATGGGTATGCCTTGGAGTAAAATTGCTGCCATTGTTGATAGCATGAAGAGTTCCGGGGTTGCCCCAGATTTGTGTACATATAATACGCTTATTAGCAGTTGTTGCAGAGGGTCATTGTATAAAGAAGCAGCAAAGTCTCGACGGCCTAAGGAAGCAATGGAGGTTTTGAAGGAGATGGAATCGAGCCGTTTTGCGCCAAGTATTGTGAGTTATAATTCATTGATATCTGCTTATGCGCGGGACGGTTTGTTAGATGAAGCTATGGAGCTAAAAAGACAGATGATGGAGAAGGGGATTGAGCATGATGTTTTTACTTACACGACGTTGTTGTCTGGTTTCGAGAAGACGGGAAAGGACGATTGTGCGATGAGAGTATTTGATGAGATGAGAGTTGCAGGGTGCCAACCGAATATATGCGCATTCAATGTGTTGATTAAGCTGCACGGTAAGAGGGGGAATTTCGTGGAGATGATGAAGGTTTTCAAGGAGATTAAGGTATGCGAGTTTGCGCCTAATATTGTTACTTGGAACACACTTTTGACCGTGTCTGGGCAAAATGGGATGGATTGTGAGATCTCACGAGTGTTCAGAGAGATGGAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGATTTTAGTAGATGTGCATCCTTGGCTCGGAGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAATGAGTTAACGTATTGTTCTTTACTGCATGCTTATGTCAATGGCAAAGAGATCCGGCGGGTGTCTGCACATGCTGAGGAAATCTATGCCAGCATTATTGAACCTCAAGCTATGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGTAG

Coding sequence (CDS)

ATGGGTATGCCTTGGAGTAAAATTGCTGCCATTGTTGATAGCATGAAGAGTTCCGGGGTTGCCCCAGATTTGTGTACATATAATACGCTTATTAGCAGTTGTTGCAGAGGGTCATTGTATAAAGAAGCAGCAAAGTCTCGACGGCCTAAGGAAGCAATGGAGGTTTTGAAGGAGATGGAATCGAGCCGTTTTGCGCCAAGTATTGTGAGTTATAATTCATTGATATCTGCTTATGCGCGGGACGGTTTGTTAGATGAAGCTATGGAGCTAAAAAGACAGATGATGGAGAAGGGGATTGAGCATGATGTTTTTACTTACACGACGTTGTTGTCTGGTTTCGAGAAGACGGGAAAGGACGATTGTGCGATGAGAGTATTTGATGAGATGAGAGTTGCAGGGTGCCAACCGAATATATGCGCATTCAATGTGTTGATTAAGCTGCACGGTAAGAGGGGGAATTTCGTGGAGATGATGAAGGTTTTCAAGGAGATTAAGGTATGCGAGTTTGCGCCTAATATTGTTACTTGGAACACACTTTTGACCGTGTCTGGGCAAAATGGGATGGATTGTGAGATCTCACGAGTGTTCAGAGAGATGGAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGATTTTAGTAGATGTGCATCCTTGGCTCGGAGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAATGAGTTAACGTATTGTTCTTTACTGCATGCTTATGTCAATGGCAAAGAGATCCGGCGGGTGTCTGCACATGCTGAGGAAATCTATGCCAGCATTATTGAACCTCAAGCTATGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGTAG

Protein sequence

MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEMKNGRCKPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETERAFFELR
Homology
BLAST of Carg26997 vs. NCBI nr
Match: KAG7022489.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 621.3 bits (1601), Expect = 4.5e-174
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEME 60
           MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEME
Sbjct: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEME 60

Query: 61  SSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDD 120
           SSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDD
Sbjct: 61  SSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDD 120

Query: 121 CAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLL 180
           CAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLL
Sbjct: 121 CAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLL 180

Query: 181 TVSGQNGMDCEISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEM 240
           TVSGQNGMDCEISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEM
Sbjct: 181 TVSGQNGMDCEISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEM 240

Query: 241 KNGRCKPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLL 300
           KNGRCKPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLL
Sbjct: 241 KNGRCKPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLL 300

Query: 301 METERAFFELR 312
           METERAFFELR
Sbjct: 301 METERAFFELR 311

BLAST of Carg26997 vs. NCBI nr
Match: XP_004137089.1 (pentatricopeptide repeat-containing protein At5g02860 [Cucumis sativus] >KGN43935.2 hypothetical protein Csa_017163 [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 8.2e-136
Identity = 261/366 (71.31%), Postives = 285/366 (77.87%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKIA +VDSMKSSGVAPDL TYNTLISSC RGSLY+EAA                
Sbjct: 268 MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 327

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRP+EAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEAMELK QM
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AM+VF+EMRVAGCQPNIC FN LIK+HG RGNF
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNF 447

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 448 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 507

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 508 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 567

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+ IIEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 568 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETER 627

BLAST of Carg26997 vs. NCBI nr
Match: XP_038888056.1 (pentatricopeptide repeat-containing protein At5g02860 [Benincasa hispida])

HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135
Identity = 262/366 (71.58%), Postives = 284/366 (77.60%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKIAA+VDSMK+SGV PDL TYNTLISSC RGSLY+EAA                
Sbjct: 270 MGMPWSKIAALVDSMKNSGVDPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 329

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEAMELK QM
Sbjct: 330 TYNALLDVYGKSRRPKEAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKTQM 389

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           +EKGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EMRVAGCQ NIC FN LIK+HG RGNF
Sbjct: 390 VEKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMRVAGCQANICTFNALIKMHGNRGNF 449

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 450 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 509

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 510 ISAYSRCGSFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 569

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+ IIEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 570 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETER 629

BLAST of Carg26997 vs. NCBI nr
Match: XP_008455020.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-133
Identity = 257/366 (70.22%), Postives = 282/366 (77.05%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKI+A+VDSMKSSGV PDL TYNTLISSC RGSLY+EAA                
Sbjct: 286 MGMPWSKISALVDSMKSSGVVPDLYTYNTLISSCRRGSLYEEAAEIFEEMKAAGFSPDKV 345

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEA+ELK QM
Sbjct: 346 TYNALLDVYGKSRRPKEAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAIELKSQM 405

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EM+ AGCQ NIC FN LIK+HG RGNF
Sbjct: 406 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMKAAGCQANICTFNALIKMHGNRGNF 465

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 466 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 525

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 526 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 585

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+  IEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 586 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGNIEPQAVLLKTLVLVYSKSDLLTETER 645

BLAST of Carg26997 vs. NCBI nr
Match: KAA0031354.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 485.3 bits (1248), Expect = 3.8e-133
Identity = 257/366 (70.22%), Postives = 282/366 (77.05%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKI+A+VDSMKSSGV PDL TYNTLISSC RGSLY+EAA                
Sbjct: 270 MGMPWSKISALVDSMKSSGVVPDLYTYNTLISSCRRGSLYEEAAEIFEEMKAAGFSPDKV 329

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEA+ELK QM
Sbjct: 330 TYNALLDVYGKSRRPKEAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAIELKSQM 389

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EM+ AGCQ NIC FN LIK+HG RGNF
Sbjct: 390 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMKAAGCQANICTFNALIKMHGNRGNF 449

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 450 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 509

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 510 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 569

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+  IEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 570 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGNIEPQAVLLKTLVLVYSKSDLLTETER 629

BLAST of Carg26997 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 7.5e-116
Identity = 219/366 (59.84%), Postives = 260/366 (71.04%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MG PW+KI ++V+ MKS G+APD  TYNTLI+ C RGSL++EAA                
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 315

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KS RPKEAM+VL EM  + F+PSIV+YNSLISAYARDG+LDEAMELK QM
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
            EKG + DVFTYTTLLSGFE+ GK + AM +F+EMR AGC+PNIC FN  IK++G RG F
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
            EMMK+F EI VC  +P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ER+TFNTL
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR G+WEQSE VLAEM++GRC
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKEI  + + AEE+Y+ +IEP+A+LLKTLVLV SK DLL E ER
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615

BLAST of Carg26997 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.8e-54
Identity = 127/362 (35.08%), Postives = 181/362 (50.00%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEA----------------- 60
           MG  W KI  ++D M+S G+  D  T +T++S+C R  L +EA                 
Sbjct: 258 MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317

Query: 61  ---------AKSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     K+    EA+ VLKEME +      V+YN L++AY R G   EA  +   M
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
            +KG+  +  TYTT++  + K GK+D A+++F  M+ AGC PN C +N ++ L GK+   
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
            EM+K+  ++K    +PN  TWNT+L + G  GMD  ++RVFREM+  GF  +RDTFNTL
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497

Query: 241 ISDFSRCAS-----------------------------LARRGLWEQSEIVLAEMKNGRC 300
           IS + RC S                             LAR+G W   E V+++MK+   
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 308
           KP E +Y  +L  Y  G     +      I    I P  MLL+TL+L   K   L  +ER
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617

BLAST of Carg26997 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.4e-50
Identity = 117/367 (31.88%), Postives = 182/367 (49.59%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEA----------------- 60
           MG  W +I A++D M+++GV PD  T +T+I++CCR  L  EA                 
Sbjct: 222 MGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVV 281

Query: 61  ---------AKSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     K+    EA+ VL EME +   P  V+YN L   YAR G  +EA      M
Sbjct: 282 TYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
             KG+  + FTY T+++ +   GK D A+ +FD+M+  G  PN+  +N+++ + GK+  F
Sbjct: 342 ASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRF 401

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
             M+++  E+      PN VTWNT+L V G+ GM+  ++RV   M   G    RDT+NTL
Sbjct: 402 TVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTL 461

Query: 241 ISDFSRCAS-----------------------------LARRGLWEQSEIVLAEMKNGRC 300
           I+ + RC S                             L+R+G W  ++ ++++M+    
Sbjct: 462 IAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGF 521

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYAS-IIEPQAMLLKTLVLVYSKSDLLMETE 312
           KPNE +Y  LL  Y  G  +  ++A   E+Y S  + P  ++L+TLV+   K   L   E
Sbjct: 522 KPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGME 581

BLAST of Carg26997 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.2e-33
Identity = 87/284 (30.63%), Postives = 149/284 (52.46%), Query Frame = 0

Query: 2   GMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAK------SRRPKE---- 61
           GM + ++A   D M+ +GV PD  T+N+L++ C RG L++ A        +RR ++    
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 62  ----------------AMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMM 121
                           A E+L +M   R  P++VSY+++I  +A+ G  DEA+ L  +M 
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 122 EKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFV 181
             GI  D  +Y TLLS + K G+ + A+ +  EM   G + ++  +N L+  +GK+G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 182 EMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTLI 241
           E+ KVF E+K     PN++T++TL+    + G+  E   +FRE + AG  A+   ++ LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 242 SDFSRCASLARRGLWEQSEIVLAEMKNGRCKPNELTYCSLLHAY 260
                  +L + GL   +  ++ EM      PN +TY S++ A+
Sbjct: 557 D------ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594

BLAST of Carg26997 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31
Identity = 89/281 (31.67%), Postives = 150/281 (53.38%), Query Frame = 0

Query: 11  IVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEMESSRFAPSIVS 70
           I+D M   G  PD+ TYN++IS  C         K    KEA+EVL +M +   +P+ V+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLC---------KLGEVKEAVEVLDQMITRDCSPNTVT 376

Query: 71  YNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMR 130
           YN+LIS   ++  ++EA EL R +  KGI  DV T+ +L+ G   T     AM +F+EMR
Sbjct: 377 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 436

Query: 131 VAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDC 190
             GC+P+   +N+LI     +G   E + + K++++   A +++T+NTL+    +     
Sbjct: 437 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 496

Query: 191 EISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEMKNGRCKPNEL 250
           E   +F EME  G      T+NTLI     C S   R + + ++++   +  G+ KP++ 
Sbjct: 497 EAEEIFDEMEVHGVSRNSVTYNTLIDGL--CKS---RRVEDAAQLMDQMIMEGQ-KPDKY 556

Query: 251 TYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLV 292
           TY SLL  +  G +I++ +   + + ++  EP  +   TL+
Sbjct: 557 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

BLAST of Carg26997 vs. ExPASy TrEMBL
Match: A0A0A0K4H7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071530 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.0e-136
Identity = 261/366 (71.31%), Postives = 285/366 (77.87%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKIA +VDSMKSSGVAPDL TYNTLISSC RGSLY+EAA                
Sbjct: 268 MGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 327

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRP+EAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEAMELK QM
Sbjct: 328 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM 387

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AM+VF+EMRVAGCQPNIC FN LIK+HG RGNF
Sbjct: 388 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNF 447

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 448 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 507

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 508 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 567

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+ IIEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 568 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETER 627

BLAST of Carg26997 vs. ExPASy TrEMBL
Match: A0A5A7SJN5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001090 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.9e-133
Identity = 257/366 (70.22%), Postives = 282/366 (77.05%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKI+A+VDSMKSSGV PDL TYNTLISSC RGSLY+EAA                
Sbjct: 270 MGMPWSKISALVDSMKSSGVVPDLYTYNTLISSCRRGSLYEEAAEIFEEMKAAGFSPDKV 329

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEA+ELK QM
Sbjct: 330 TYNALLDVYGKSRRPKEAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAIELKSQM 389

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EM+ AGCQ NIC FN LIK+HG RGNF
Sbjct: 390 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMKAAGCQANICTFNALIKMHGNRGNF 449

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 450 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 509

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 510 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 569

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+  IEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 570 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGNIEPQAVLLKTLVLVYSKSDLLTETER 629

BLAST of Carg26997 vs. ExPASy TrEMBL
Match: A0A1S3C150 (pentatricopeptide repeat-containing protein At5g02860 OS=Cucumis melo OX=3656 GN=LOC103495294 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.9e-133
Identity = 257/366 (70.22%), Postives = 282/366 (77.05%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKI+A+VDSMKSSGV PDL TYNTLISSC RGSLY+EAA                
Sbjct: 286 MGMPWSKISALVDSMKSSGVVPDLYTYNTLISSCRRGSLYEEAAEIFEEMKAAGFSPDKV 345

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+S FAPSIV+YNSLISAYARDGLLDEA+ELK QM
Sbjct: 346 TYNALLDVYGKSRRPKEAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAIELKSQM 405

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           ++KGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EM+ AGCQ NIC FN LIK+HG RGNF
Sbjct: 406 VKKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMKAAGCQANICTFNALIKMHGNRGNF 465

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+CE  P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ERDTFNTL
Sbjct: 466 VEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 525

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 526 ISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 585

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKE+ R+SA AEEIY+  IEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 586 KPNELTYCSLLHAYANGKEVERMSALAEEIYSGNIEPQAVLLKTLVLVYSKSDLLTETER 645

BLAST of Carg26997 vs. ExPASy TrEMBL
Match: A0A6J1D639 (pentatricopeptide repeat-containing protein At5g02860 OS=Momordica charantia OX=3673 GN=LOC111017386 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 4.1e-133
Identity = 257/365 (70.41%), Postives = 280/365 (76.71%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPW++IAA+VDSMKS G+APDL TYNTLISSC RGSLY+EAA                
Sbjct: 267 MGMPWNRIAALVDSMKSXGIAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 326

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRP+EAMEVLKEME+S FAPSIV+ NSLISAYARDGLL EAMELK QM
Sbjct: 327 TYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTXNSLISAYARDGLLXEAMELKXQM 386

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
            EKGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EMRVAGCQPNIC FN LIK+HG RGNF
Sbjct: 387 XEKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMRVAGCQPNICTFNALIKMHGNRGNF 446

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
           VEMMKVF+EIK+C   P+IVTWNTLL V GQNGMDCE+S VF+EM+RAGFV ERDTFNTL
Sbjct: 447 VEMMKVFEEIKICACVPDIVTWNTLLAVFGQNGMDCEVSGVFKEMKRAGFVPERDTFNTL 506

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR GLWEQSE VLAEMK+GRC
Sbjct: 507 ISAYSRCGSFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRC 566

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 311
           KPNEL YCSLLHAY NGKEI R+SA AEEIY+ IIEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 567 KPNELXYCSLLHAYANGKEIGRMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETER 626

BLAST of Carg26997 vs. ExPASy TrEMBL
Match: A0A6J1IBL6 (pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita maxima OX=3661 GN=LOC111471013 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.8e-132
Identity = 257/366 (70.22%), Postives = 277/366 (75.68%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MGMPWSKIAA+VDSMKSSG+APD  TYNTLISSC RGSLY+EAA                
Sbjct: 265 MGMPWSKIAALVDSMKSSGIAPDSYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKV 324

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KSRRPKEAMEVLKEME+  FAPSIV+YNSLISAYAR GLLDEAMELK QM
Sbjct: 325 TYNALLDVYGKSRRPKEAMEVLKEMEAGGFAPSIVTYNSLISAYARGGLLDEAMELKTQM 384

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
           +EKGI+ DVFTYTTLLSGFEKTGKDD AMRVF+EMR AGCQ NIC FN LIK+HG RGNF
Sbjct: 385 VEKGIKPDVFTYTTLLSGFEKTGKDDYAMRVFEEMRAAGCQANICTFNALIKMHGNRGNF 444

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
            EMMKVFKEIK CE  P+IVTWNTLL V GQNGMD E+S VFREM+RAGFV ERDTFNTL
Sbjct: 445 EEMMKVFKEIKRCECVPDIVTWNTLLAVFGQNGMDSEVSGVFREMKRAGFVPERDTFNTL 504

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           +S +SRC                             A+LAR GLWEQ+E VLAEMK GRC
Sbjct: 505 MSAYSRCGSFDQAMTIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQAEKVLAEMKGGRC 564

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPN+LTYCSLLHAY NGKEI R+SA AEEIY+  IEPQA+LLKTLVLVYSKSDLL ETER
Sbjct: 565 KPNDLTYCSLLHAYANGKEIERMSALAEEIYSGDIEPQAVLLKTLVLVYSKSDLLTETER 624

BLAST of Carg26997 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 418.3 bits (1074), Expect = 5.4e-117
Identity = 219/366 (59.84%), Postives = 260/366 (71.04%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAA---------------- 60
           MG PW+KI ++V+ MKS G+APD  TYNTLI+ C RGSL++EAA                
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 315

Query: 61  ----------KSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     KS RPKEAM+VL EM  + F+PSIV+YNSLISAYARDG+LDEAMELK QM
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
            EKG + DVFTYTTLLSGFE+ GK + AM +F+EMR AGC+PNIC FN  IK++G RG F
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
            EMMK+F EI VC  +P+IVTWNTLL V GQNGMD E+S VF+EM+RAGFV ER+TFNTL
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495

Query: 241 ISDFSRC-----------------------------ASLARRGLWEQSEIVLAEMKNGRC 300
           IS +SRC                             A+LAR G+WEQSE VLAEM++GRC
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 312
           KPNELTYCSLLHAY NGKEI  + + AEE+Y+ +IEP+A+LLKTLVLV SK DLL E ER
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615

BLAST of Carg26997 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 3.4e-55
Identity = 127/362 (35.08%), Postives = 181/362 (50.00%), Query Frame = 0

Query: 1   MGMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEA----------------- 60
           MG  W KI  ++D M+S G+  D  T +T++S+C R  L +EA                 
Sbjct: 258 MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317

Query: 61  ---------AKSRRPKEAMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQM 120
                     K+    EA+ VLKEME +      V+YN L++AY R G   EA  +   M
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377

Query: 121 MEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNF 180
            +KG+  +  TYTT++  + K GK+D A+++F  M+ AGC PN C +N ++ L GK+   
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437

Query: 181 VEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTL 240
            EM+K+  ++K    +PN  TWNT+L + G  GMD  ++RVFREM+  GF  +RDTFNTL
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497

Query: 241 ISDFSRCAS-----------------------------LARRGLWEQSEIVLAEMKNGRC 300
           IS + RC S                             LAR+G W   E V+++MK+   
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557

Query: 301 KPNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSKSDLLMETER 308
           KP E +Y  +L  Y  G     +      I    I P  MLL+TL+L   K   L  +ER
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617

BLAST of Carg26997 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 145.2 bits (365), Expect = 8.8e-35
Identity = 87/284 (30.63%), Postives = 149/284 (52.46%), Query Frame = 0

Query: 2   GMPWSKIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAK------SRRPKE---- 61
           GM + ++A   D M+ +GV PD  T+N+L++ C RG L++ A        +RR ++    
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376

Query: 62  ----------------AMEVLKEMESSRFAPSIVSYNSLISAYARDGLLDEAMELKRQMM 121
                           A E+L +M   R  P++VSY+++I  +A+ G  DEA+ L  +M 
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 122 EKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMRVAGCQPNICAFNVLIKLHGKRGNFV 181
             GI  D  +Y TLLS + K G+ + A+ +  EM   G + ++  +N L+  +GK+G + 
Sbjct: 437 YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 182 EMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDCEISRVFREMERAGFVAERDTFNTLI 241
           E+ KVF E+K     PN++T++TL+    + G+  E   +FRE + AG  A+   ++ LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556

Query: 242 SDFSRCASLARRGLWEQSEIVLAEMKNGRCKPNELTYCSLLHAY 260
                  +L + GL   +  ++ EM      PN +TY S++ A+
Sbjct: 557 D------ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594

BLAST of Carg26997 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-32
Identity = 89/281 (31.67%), Postives = 150/281 (53.38%), Query Frame = 0

Query: 11  IVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEMESSRFAPSIVS 70
           I+D M   G  PD+ TYN++IS  C         K    KEA+EVL +M +   +P+ V+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLC---------KLGEVKEAVEVLDQMITRDCSPNTVT 376

Query: 71  YNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVFDEMR 130
           YN+LIS   ++  ++EA EL R +  KGI  DV T+ +L+ G   T     AM +F+EMR
Sbjct: 377 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 436

Query: 131 VAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQNGMDC 190
             GC+P+   +N+LI     +G   E + + K++++   A +++T+NTL+    +     
Sbjct: 437 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 496

Query: 191 EISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEMKNGRCKPNEL 250
           E   +F EME  G      T+NTLI     C S   R + + ++++   +  G+ KP++ 
Sbjct: 497 EAEEIFDEMEVHGVSRNSVTYNTLIDGL--CKS---RRVEDAAQLMDQMIMEGQ-KPDKY 556

Query: 251 TYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLV 292
           TY SLL  +  G +I++ +   + + ++  EP  +   TL+
Sbjct: 557 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

BLAST of Carg26997 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-32
Identity = 86/290 (29.66%), Postives = 141/290 (48.62%), Query Frame = 0

Query: 7   KIAAIVDSMKSSGVAPDLCTYNTLISSCCRGSLYKEAAKSRRPKEAMEVLKEMESSRFAP 66
           K A I++ ++ SG  PD+ TYN +IS  C         K+     A+ VL  M  S   P
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYC---------KAGEINNALSVLDRMSVS---P 214

Query: 67  SIVSYNSLISAYARDGLLDEAMELKRQMMEKGIEHDVFTYTTLLSGFEKTGKDDCAMRVF 126
            +V+YN+++ +    G L +AME+  +M+++    DV TYT L+    +      AM++ 
Sbjct: 215 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 274

Query: 127 DEMRVAGCQPNICAFNVLIKLHGKRGNFVEMMKVFKEIKVCEFAPNIVTWNTLLTVSGQN 186
           DEMR  GC P++  +NVL+    K G   E +K   ++      PN++T N +L      
Sbjct: 275 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 334

Query: 187 GMDCEISRVFREMERAGFVAERDTFNTLISDFSRCASLARRGLWEQSEIVLAEMKNGRCK 246
           G   +  ++  +M R GF     TFN LI+       L R+GL  ++  +L +M    C+
Sbjct: 335 GRWMDAEKLLADMLRKGFSPSVVTFNILIN------FLCRKGLLGRAIDILEKMPQHGCQ 394

Query: 247 PNELTYCSLLHAYVNGKEIRRVSAHAEEIYASIIEPQAMLLKTLVLVYSK 297
           PN L+Y  LLH +   K++ R   + E + +    P  +   T++    K
Sbjct: 395 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7022489.14.5e-174100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_004137089.18.2e-13671.31pentatricopeptide repeat-containing protein At5g02860 [Cucumis sativus] >KGN4393... [more]
XP_038888056.11.8e-13571.58pentatricopeptide repeat-containing protein At5g02860 [Benincasa hispida][more]
XP_008455020.13.8e-13370.22PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo][more]
KAA0031354.13.8e-13370.22pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06806... [more]
Match NameE-valueIdentityDescription
Q9LYZ97.5e-11659.84Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
O646244.8e-5435.08Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
B8Y6I09.4e-5031.88Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q9SIC91.2e-3330.63Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
Q9LFF12.6e-3131.67Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0K4H74.0e-13671.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071530 PE=4 SV=1[more]
A0A5A7SJN51.9e-13370.22Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C1501.9e-13370.22pentatricopeptide repeat-containing protein At5g02860 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1D6394.1e-13370.41pentatricopeptide repeat-containing protein At5g02860 OS=Momordica charantia OX=... [more]
A0A6J1IBL67.8e-13270.22pentatricopeptide repeat-containing protein At5g02860 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT5G02860.15.4e-11759.84Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G18940.13.4e-5535.08Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G31400.18.8e-3530.63genomes uncoupled 1 [more]
AT3G53700.11.8e-3231.67Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G09900.13.1e-3229.66Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 19..44
e-value: 1.1E-6
score: 28.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 69..102
e-value: 1.2E-9
score: 35.8
coord: 104..138
e-value: 4.0E-8
score: 30.9
coord: 25..44
e-value: 0.0016
score: 16.4
coord: 140..172
e-value: 7.3E-6
score: 23.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 90..151
e-value: 3.5E-19
score: 68.6
coord: 236..261
e-value: 0.001
score: 19.1
coord: 159..216
e-value: 1.8E-7
score: 31.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 67..101
score: 12.704205
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 9.218511
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 12.517862
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 224..311
e-value: 1.4E-7
score: 33.3
coord: 118..223
e-value: 8.2E-25
score: 89.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..117
e-value: 5.1E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR47939MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKEcoord: 6..179
coord: 47..305
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..34
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26997-RACarg26997-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding