Carg26855 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg26855
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionstress enhanced protein 1, chloroplastic
LocationCarg_Chr11: 8878837 .. 8881402 (-)
RNA-Seq ExpressionCarg26855
SyntenyCarg26855
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAGAAGAACAGATAAGGAGTTTTCCGGCGACAATCGAGCTCCTAAAATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGGTACTCTCTTCATCTCTCTACACTTTCTCCATTTCGTTCTTCCGTTCTGTGATTGTTGAATATCCATCGATTCATAAAACACACGAACACAATGTTGCAGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGGTACTTACAGAGTTTTATTCTTTCTATTCTCAGTCTAACTCGAATGTTTCTGCTTGATGTATTCATGATTTTTATCCATTAGTACGTTTTTTCATTTCAATCTTCATTTCAAGCATACAATGGAGCATGAATATTGAACTACCCTAATATAATATCAGAATGAAGTCTGAATGTTCTATAATATTGTGGTTATCCTGTTTCTTGCTTATTTTAAGCTGTGACGGTGAAATTGAATTCCATTCTAACATGAAGAGGTATGATTATTCTTAGCTAGAATTGAAATTTTTTCTCGGAAATGTTAGGGAAAACTGACACAGATATAATATATTCCACTTTGGTAGTGGCTTTTATCTTTTATTTCACTTAAAAGGCGTCGTATCAATAGAGGTATTGTCCCTCGTTTATGTATCCGTGATTGATCGTCCCTTGCGTATGTAGGACTTTGTTTGTCTTCCTCAATACTGTGGCTAGACTTTATGAAGTATCGGCTAATGGTTTTTCTTGTTCCCAGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGGTATGGCCTTTCTAATTACAGAATTCGAGTCTTGTTACTTAGATTGCTGATAGCTGAAAGAAATTTGTTGTAGGGATTTCTGGACCTTTTGGAATCTGGAATTTGGCATATCTAATTCAAAACACCTTATTGTTATAAGATAATAGCTCCACTCCCTACTTATTTGGACAAAAGTATCTTGTACCACTGGGAGTATTCCATTTAAAGTGTTGAGTTGCACTAAAGATGGCTCTTAAAATGTATTTGGAATGTATTCCACTGGCTAGGTGCAAAACTCTCAACTGTCTACTTGGTCTGTCTTTTTTCAAGTGAATTAGAGAGGCGGATCTGATTGGTACGCTATGAACCAATCATTTTTCTCGTGCGAGTGCCACGGAATGGGCGAAGTTTTTTCTTGTAACTCTGCCATTTATATTCCCAGACACTTATCTCACTGATTTTGGCTTGCAAAAGAAGTGACCGCTGAATTATTCTAAGCTGATGGTTGGATATGCAGCATATGTGTGAGATCTCACATTGATCGGAGAGGGGAACGAACCATTCCTTATAGGGGTGTGGAAAACTCTCTAGCAGATGCGTTTTAAAACCTTGACGGGAACCCCGAAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGTGGTGGGTTTGGGCTGTTACAAATGGTATCAGAACCAGACACTAGACGGTGTGTCAGCGAGGACGCTGGGCCTCAAGGGTGTGGAGAAACATCTCCCTAGCAAACGCATTTTAAAACCGCGAAGCTGACGGTGATACGTAACGGGCCAAAACGGACAATATCTGCTAGTGGCAGGCTTGGACGCTTGATTCATTATTCATTTTGGCCTTGGCCTTATATAAAAGTGGCCGTCTAAGTTTTTGTAGGCCGGGCTGCTCTTTCCAGTAGTGTACTTTGTTCAGTTAGAGGAATACCATTATCTTAGACTTAACCCTCGTTTTCTTTCTAGCGTCTTGTAATACAAGTTTCATACGAGACACATGAAGCACTTAACGAAACCTTACCAGAATCATTGTTTTCATGATGCAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGAACACGTCTAAGATTTTCACTGCACATTGGCTGTAAAGTTTGTGATCCTAAAAGATATTTGCTTGATATTCATTTTCATTCGTTCTAATACTCTAGATTGTGAACAACGATCAACTAAATTGGAGTGTTCGACTCAAAACACTTGTGTTTTTGTTGTGGACAGCGGTGATAGAGGGAGAGCCTGTGAAGCCTGCAATTAGCTACATCCAATTCTCAGTGAGGTAGAGCACTCAACTTTTCTTTTTCTTTCTTTCTTTTTGAGTTCTGTGTAGCACTGAAATACTTTCCCTGAGATTAAGTTTGGTTGTGTGATGATAATCATAAGATAAATGTTTAATCACTATCCATAAAAATACAATGAATGATGGATTATGTAAAATATTGTTTGTACAATAAATTCTAAAAGGAAAAATATAAGATATATATA

mRNA sequence

TTGGAGAAGAACAGATAAGGAGTTTTCCGGCGACAATCGAGCTCCTAAAATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGAACACGTCTAAGATTTTCACTGCACATTGGCTGTAAAGTTTGTGATCCTAAAAGATATTTGCTTGATATTCATTTTCATTCGTTCTAATACTCTAGATTGTGAACAACGATCAACTAAATTGGAGTGTTCGACTCAAAACACTTGTGTTTTTGTTGTGGACAGCGGTGATAGAGGGAGAGCCTGTGAAGCCTGCAATTAGCTACATCCAATTCTCAGTGAGGTAGAGCACTCAACTTTTCTTTTTCTTTCTTTCTTTTTGAGTTCTGTGTAGCACTGAAATACTTTCCCTGAGATTAAGTTTGGTTGTGTGATGATAATCATAAGATAAATGTTTAATCACTATCCATAAAAATACAATGAATGATGGATTATGTAAAATATTGTTTGTACAATAAATTCTAAAAGGAAAAATATAAGATATATATA

Coding sequence (CDS)

ATGGCCGTTCTTCATGCTTCCGCCTCCCTTTCTCTCGCCATACGCGATGCTTCCTTCGCAAGATCAGCCCCAAAACCTTTTCCACTTCGCAGAGGTCGCCTCCCGAATTTATACCGATTCGGAACCACGTTTGCTACTGGCTCTCCACTTGTGATAAGCAAGCCAAGTGGTCAAACGAAGCGTGCAATGAAACCAAATTCTGTTTCTATAAGATGTGAGCAAAGTAGCCAAGAGAGTAATAATCTGGATGTTTGGCTTGGGCGGCTAGCAATGGTAGGATTTGCAATTGCAATAAGTGTTGAAATAGCAACAGGCAAAGGTCTTTTGGAGAATTTTGGAGTAACGTCTCCCCTGCCTAGTGCAGCATTGGGAGTCACCGCATTGGTTGGCATATTGACAGCAGTTTTCATCTTTCAATCAGCTTCCAAAAACTGA

Protein sequence

MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPSAALGVTALVGILTAVFIFQSASKN
Homology
[Close]
BLAST of Carg26855 vs. NCBI nr
Match: KAG7022474.1 (Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. NCBI nr
Match: XP_023529447.1 (stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529449.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529450.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 6.9e-69
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. NCBI nr
Match: XP_022927651.1 (stress enhanced protein 1, chloroplastic [Cucurbita moschata] >XP_022927652.1 stress enhanced protein 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. NCBI nr
Match: XP_022988996.1 (stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988998.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 3.4e-68
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKP+GQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPTGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. NCBI nr
Match: KAG6588689.1 (Stress enhanced protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 9.0e-61
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120

Query: 121 AALGVTALV 130
           AALGVTAL+
Sbjct: 121 AALGVTALI 129

[Close]
BLAST of Carg26855 vs. ExPASy Swiss-Prot
Match: Q9M7I9 (Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-31
Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSA--PKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQ 60
           MA+   SASL+ ++ ++   + A    P    R  +P L    +TFA+GSPL+  K S  
Sbjct: 1   MALSQVSASLAFSLPNSGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSMT 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            +   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV SPL
Sbjct: 61  RRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVG+L AVFIFQS+SKN
Sbjct: 121 PTVALAVTALVGVLAAVFIFQSSSKN 146

[Close]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match: A0A6J1EI92 (stress enhanced protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434475 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.4e-69
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKPSGQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPSGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match: A0A6J1JIS2 (stress enhanced protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486191 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSLAIRDASFARSAPKPFPLRRG LPNLYRFGTTFATGSPLVISKP+GQTK
Sbjct: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGHLPNLYRFGTTFATGSPLVISKPTGQTK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
           RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLPS
Sbjct: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPS 120

Query: 121 AALGVTALVGILTAVFIFQSASKN 145
           AALGVTALVGILTAVFIFQSASKN
Sbjct: 121 AALGVTALVGILTAVFIFQSASKN 144

[Close]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match: A0A6J1D4Y5 (ADP-ribosylation factor 2 OS=Momordica charantia OX=3673 GN=LOC111017336 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQTK 60
           MAVLHASASLSL IRDASFARSAPK FPL R  LPNLYR GT FATGSPLV+SKP+GQ K
Sbjct: 1   MAVLHASASLSLTIRDASFARSAPKVFPLHRRPLPNLYRIGTAFATGSPLVLSKPTGQKK 60

Query: 61  RAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLPS 120
            A KPNSVSIRCEQS+Q SNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFG+T+PLP+
Sbjct: 61  HAWKPNSVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGLTTPLPT 120

Query: 121 AALGVTALVGILTAVFIFQSASK 144
            AL VTALVGILTAVFIFQSASK
Sbjct: 121 VALAVTALVGILTAVFIFQSASK 143

[Close]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match: A0A6J1IBF1 (stress enhanced protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470966 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 122/145 (84.14%), Postives = 130/145 (89.66%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFA-RSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQT 60
           MA LHASASLSL +RDASFA R AP+ FPL RG LPNLYR GTTFATGSPLV+SKP+GQ 
Sbjct: 1   MAALHASASLSLVVRDASFARRRAPEVFPLHRGSLPNLYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLP 120
           K  +KPNSVSIRC+QSSQESN LDVWLGR AMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHTVKPNSVSIRCKQSSQESNILDVWLGRFAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SAALGVTALVGILTAVFIFQSASKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match: A0A6J1GNA4 (stress enhanced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455481 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 123/145 (84.83%), Postives = 130/145 (89.66%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFA-RSAPKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQT 60
           MA LHASASLSLA+RD SFA R AP+ FPL RG LPN YR GTTFATGSPLV+SKP+GQ 
Sbjct: 1   MAALHASASLSLAVRDTSFARRRAPEVFPLPRGSLPNSYRLGTTFATGSPLVLSKPTGQK 60

Query: 61  KRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPLP 120
           K  +KPNSVSIRCEQSSQESN LDVWLGRLAMVGFAIAISVEIATGKGLLENFGVT+PLP
Sbjct: 61  KHTVKPNSVSIRCEQSSQESNILDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTTPLP 120

Query: 121 SAALGVTALVGILTAVFIFQSASKN 145
           S AL VTALVGILTAVFIFQSA+KN
Sbjct: 121 SVALAVTALVGILTAVFIFQSATKN 145

[Close]
BLAST of Carg26855 vs. TAIR 10
Match: AT4G34190.1 (stress enhanced protein 1 )

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 80/146 (54.79%), Postives = 103/146 (70.55%), Query Frame = 0 

Query: 1   MAVLHASASLSLAIRDASFARSA--PKPFPLRRGRLPNLYRFGTTFATGSPLVISKPSGQ 60
           MA+   SASL+ ++ ++   + A    P    R  +P L    +TFA+GSPL+  K S  
Sbjct: 1   MALSQVSASLAFSLPNSGALKLATITNPTSTCRVHVPQLAGIRSTFASGSPLLPLKLSMT 60

Query: 61  TKRAMKPNSVSIRCEQSSQESNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTSPL 120
            +   +  SVSIR EQS++ S+ LD+WLGR AMVGFA+AI+VEI+TGKGLLENFGV SPL
Sbjct: 61  RRGGNRAASVSIRSEQSTEGSSGLDIWLGRGAMVGFAVAITVEISTGKGLLENFGVASPL 120

Query: 121 PSAALGVTALVGILTAVFIFQSASKN 145
           P+ AL VTALVG+L AVFIFQS+SKN
Sbjct: 121 PTVALAVTALVGVLAAVFIFQSSSKN 146

The following BLAST results are available for this feature:
BLAST of Carg26855 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022474.11.8e-69100.00Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosp... [more]
XP_023529447.16.9e-6999.31stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529... [more]
XP_022927651.11.5e-6898.61stress enhanced protein 1, chloroplastic [Cucurbita moschata] >XP_022927652.1 st... [more]
XP_022988996.13.4e-6897.92stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stre... [more]
KAG6588689.19.0e-6198.45Stress enhanced protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
BLAST of Carg26855 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M7I92.7e-3154.79Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1... [more]
BLAST of Carg26855 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EI927.4e-6998.61stress enhanced protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1JIS21.7e-6897.92stress enhanced protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1D4Y54.5e-5886.71ADP-ribosylation factor 2 OS=Momordica charantia OX=3673 GN=LOC111017336 PE=4 SV... [more]
A0A6J1IBF11.1e-5684.14stress enhanced protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=... [more]
A0A6J1GNA41.1e-5684.83stress enhanced protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
BLAST of Carg26855 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G34190.11.9e-3254.79stress enhanced protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 30..144
NoneNo IPR availablePANTHERPTHR14154:SF18STRESS ENHANCED PROTEIN 1, CHLOROPLASTICcoord: 30..144
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 80..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26855-RACarg26855-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding