Carg26738 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGATCAAAATCAGTTTGGTTCTATCGTTCTCTGGTCCGGTCCATCCAAAAACCGCAAATCTTTTCAGTCGTAAACTTTGGACTTCGAAGAATCAAGCCACGAACGTTCAGTTCAGGAAGCGAATCAGACGAAACCTTCAAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTAGTGGTTGCATCTTGTCTAATCGGAGGAATTGGTACTTGCTCTTTCCTCTTTAGAGCCCTAATTATCGTTCAATTTTTCATTTCTTTTGATCGATGGCATGAATCCATATGTTTTCTTTCAATTGTCGCTCATATCTATCTATTGGGAAGATCATATTTAAATGTTTTCTTTTCGGGTATTCTATATAGTTTCGGATGCGAAAAAACAATGTCGATTGAAAGCTCCTTTGTCTGACTAAATAGATTTTCGTATTTCAACCTTGTGTGTAGGATTCAGCTTTGCCTATATATATTCTGTTTCGGTGTTTCTAGTGACCGTAAATTTGTTAAGATGTTGGGATTTGTTCGTTTAAATGCTTATTAATGTTCGAGATGGGAGTTTTGGACCTTTGAGCCGGCTACCGAAGTGAGCTGCTAGCCCAAGACATACACACCTTTTCAATAGAAATGTACACGCAAGCCAAGATGGCTGAACTATCCCGAGACATAGGATGATATCATGATGCATAGGTTGCATTGTTGGGAACCAAGATGATCACTGAGATGCGATCTTGCACTTGAGAGACCTTGGCGTAGAATAGAGGCAAGGTCAAGCCAAATGACTAGGCCTAGTGTAGAGACAAGTTGACTAGGAGTCTGTGTGGTTGAACAAGCTTAGATGCCGCACGAGTTGTGTTCGGTTGATGAAGGAGAACCTCACCTAAGGTCCGATAAAGCCACGAAAACGGGTAAAAATATGAATGAGGCTTGAGCTCCCCTTAAGACTTGTCATGAGAGTGTCAAGATCATAACACTGCACAGTTGAAAATGTACAACCGATAGTCGAACTATGGTTCATATACTAAGAGTATAAGAATGAAATAGAGAAATTAAGGATTTACCATTAAAGACGAACTATGGTTCATATACTAAGAATCTACAAAATCTTACAGATAAAATTCAAATTACGTAACGAATATCCTAAGAATTGGGACATGTCTTCACTAAATAGGTTCTCATATCTATGTTGGCCATAACTAGTCATATGTGCTTCCTCTGCCTAATTTAACTGTAGTTATAAAAGAAAATGTTGCCCATCACTCAACAATATTAGATGCTCCACCTAGCTTTAGCATCAAGTGTGAACTATCTGGAACTTTTAAACAACACTGAAATGAGGGTTTGAAATAATTGCTAATATAGGTGGCAATGCAAGGGATAAGATTTTATGGAGTTTAGACTCTTGAGGTCTTTCTTCAGTTAAAACTGCTTGTATATTGGGTAATCAATTTCATAATAATTCTGAGGCTTCTTGCTCAGCTTATCAAATGTTGGAAAATTGTGGGGAAAAAGGGTGCTTGCTAAGTTGAAAACATTCTAATGGAAAGTTTACAATGTTATTATTCTATTCCTAGCAGTTTCAATTTGAGAAAGAAGGTTTTATGAGTTCATCCTTCACAGAGAAACTATGTCCTGTTCCATTTGGAGATGTTTTGCAAGATAGATTGCGGGAAATTTGTTCTCAGAATTGGATTTAAGTTCCACCGATAATTTAGCATCACTGAGAACTGGGCATCTTCAGCCAATTAGCCCTGTGCTCCCCAACACTCCTAGGATTAGCAACCTACCAGAGTTTGGAGCCACTTACCTGCATATGTTTATACCAACTAGTCACAGGTTGTTAAATGAAACACAATAGCAAATTGATAGGACCCCACTGGCCAGAAAATAACAAATAGAACTATAAAGCAATATGAAATTGATAATCGTGGACATGCATTTGATGAATCTCTGCAACCTTGACCTAAAGTTTCAAAGGTTTCTTTCTTCAACAAATAAGTATCCTTAGCTTTGTTCATCCTTCTTAAAAAGGTACTACATTTGGACTTTTTGTGTTTCTTACCACAATAACCAAAAACTGAACTAAAAGAAAAATGACTTATTTCTTCCCTACAACCAATAAACTCCATTGATTAATATCCATTTTCAACATCTTGATGAAGCAAGAGAGAATGAGAGGTGGAATTACCGCCTTACCTTCTTCATTTTTCATGATAAACTGATAAGTGAGATCAAGTCCAATTTTTACGCGCTTTTTCGGTTTGATTGGCTACCACATGGAACATATGTGTACATTTTGGTTTCTTACATATTACAAACCTTGTAGGTCTTTTCCTTCCTGCCGTCGTAAGACCAATTCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTAAGTACGGAATCTTGACAAGTTTTAGACATTCATTCTTTTCTGATGTGTGGTTTGGTTGGATCATTTGGGCCAAATGTAAACGTGAGTTTCTTTGCTTATGTCTTGAAGTTTATGTTTCTTTGGTACTTATTATCATTCTCAGCCTCTGGTAAGTGAGATTCCTTGCCACTTTCCAAAAACATATGCCAGCCAGTATCTAAGTGGGGAACAATCAATAAATCTACCCTAAAAAAACCAACAATTTCTTGTTTTTCCCTTTCTTTGATAGGAGGAAATTTTTTTACTTTTCTTACAATGTTCATTGTAAATTTCTGTATTGTCAAATTTGTAGGTGGTTGCGAGTATGACTGGAAAGAAATGAGGATGATTGGTATCGGTGACATAAGAAGGTTGTTCTTGATGGATCAATGATCATTCTCTTCTGCCATAAAATAAGTCTGTACAATCTTTTTAAACGTCATGGTTGATAGCAATAGTTATTGCTACACATTCACTTGTTTTATGCCCAATGCATAAGACTGATTTTCAAGATATTTCAGCTTTGAGCACTCCGTTTGAAGCCCTGTCAAAACTTGGTTTCACCATAAATTGAGTTCTAAAAACTCGGTTTGATTTTCTTTTCTTGTTTGTTTCAAATGTGGGATCGAACCGTTGACTTTTGGGATGGTAAGTTGATAATTGGCAAAAAGTCAAATTGAGCGTACCTCATTATATACATTATGAAAGAACTAAAACACGAATCACTTCATCCTTGTTTCTAATGTTCTTTCATTTTGGTTGTTTTTGTTTGAATTAATTATTTTATTCACATAGTTTTTTGGGTTCATTTATGAAGGTTGAAGGTTTAAGTTGCATTACGAATCATTATGATATGTAG TAAAGATCAAAATCAGTTTGGTTCTATCGTTCTCTGGTCCGGTCCATCCAAAAACCGCAAATCTTTTCAGTCGTAAACTTTGGACTTCGAAGAATCAAGCCACGAACGTTCAGTTCAGGAAGCGAATCAGACGAAACCTTCAAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTAGTGGTTGCATCTTGTCTAATCGGAGGAATTGGTCTTTTCCTTCCTGCCGTCGTAAGACCAATTCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTTGAAGGTTTAAGTTGCATTACGAATCATTATGATATGTAG ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTAGTGGTTGCATCTTGTCTAATCGGAGGAATTGGTCTTTTCCTTCCTGCCGTCGTAAGACCAATTCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTTGAAGGTTTAAGTTGCATTACGAATCATTATGATATGTAG MPVMEKLKMFVVQEPVVVASCLIGGIGLFLPAVVRPILDSYEASKQAPQPVLSDVEGLSCITNHYDM Homology
BLAST of Carg26738 vs. NCBI nr
Match: KAG7013814.1 (hypothetical protein SDJN02_23983 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.2 bits (339), Expect = 2.1e-28 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Carg26738 vs. NCBI nr
Match: XP_022958795.1 (uncharacterized protein LOC111459960 [Cucurbita moschata] >XP_023547705.1 uncharacterized protein LOC111806568 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.8 bits (268), Expect = 3.6e-20 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg26738 vs. NCBI nr
Match: XP_023006679.1 (uncharacterized protein LOC111499335 [Cucurbita maxima] >XP_023006681.1 uncharacterized protein LOC111499335 [Cucurbita maxima]) HSP 1 Score: 107.5 bits (267), Expect = 4.7e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg26738 vs. NCBI nr
Match: XP_038875998.1 (uncharacterized protein LOC120068338 [Benincasa hispida]) HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18 Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Carg26738 vs. NCBI nr
Match: XP_022959928.1 (uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_022959929.1 uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_023005103.1 uncharacterized protein LOC111498190 [Cucurbita maxima] >XP_023513591.1 uncharacterized protein LOC111778152 [Cucurbita pepo subsp. pepo] >KAG7025334.1 hypothetical protein SDJN02_11829 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of Carg26738 vs. ExPASy TrEMBL
Match: A0A6J1H4H1 (uncharacterized protein LOC111459960 OS=Cucurbita moschata OX=3662 GN=LOC111459960 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.7e-20 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg26738 vs. ExPASy TrEMBL
Match: A0A6J1L2U6 (uncharacterized protein LOC111499335 OS=Cucurbita maxima OX=3661 GN=LOC111499335 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.3e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg26738 vs. ExPASy TrEMBL
Match: A0A6J1H9H3 (uncharacterized protein LOC111460833 OS=Cucurbita moschata OX=3662 GN=LOC111460833 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of Carg26738 vs. ExPASy TrEMBL
Match: A0A6J1L1A7 (uncharacterized protein LOC111498190 OS=Cucurbita maxima OX=3661 GN=LOC111498190 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.3e-19 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of Carg26738 vs. ExPASy TrEMBL
Match: A0A068UM29 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027698001 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.5e-19 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of Carg26738 vs. TAIR 10
Match: AT2G46540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.7 bits (221), Expect = 9.4e-19 Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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