Carg24990 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24990
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial glycoprotein family protein
Location	Carg_Chr03: 452664 .. 455829 (-)
RNA-Seq Expression	Carg24990
Synteny	Carg24990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCGAGTGGCGGCCGAGATTGAGGCATGTTGGAGAGAGTGAGAGGACGCCGCTGGTTGAAGGGATAGTAGAGGAATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTCCATTTCAGGTCCTTTTTAATTTCCTCGCTTCTCAAACAAATCATCACTGCTTTCTGATCTGAATTTAATCGCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGACTCGCCCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATGTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGATGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGGTTGTTTGAGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGGTACTACTTTTTGGCAACTCTAGTAACCATTTGTGTTTTGATTGCCTTGTTTTAGAAGCTAGAAATTCATGAGTTCTCTATGTTTACTGATTTCAAATTGGGACTGTGAATTGGATATAGAATTTTCATCTGTTGAGATTGGTCTCTTGGTTATATCTTGAAACGAGTGTTATGACATGAGAAGATGAATAGGGATGGGTTTTCGCTTAATTCCTTCAACATTTTTCTTTTGAGAGCTCTGTCGGGTGAAATTTGTCGGCTGTATCTTGGGGCTGGTTGTTTTTATTGAATTCTTGTAATTTGGGATCCTTTTCATCATACATTCGTCGAACCTTTGCGCCACATTCATTGTAGAAGGCACTAGGTTGAGTCCACTGCACAATTTATGGAATCTTACCGCCAAAGTAAATTAATCTGTGTACTATTGAGGATTGTTTGGAGAGAAGTTCCACATCGGCTAATTAAGGGGTTGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGAGGAAACCAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATTATACTATTGTGGAGGTCCATGGTACCAGAGTTGTGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAACTTCGAATAGGTGTAGTCAAAAGTGACTAAAGTGTCGAACAAAGGGTATACTTGGTTCAAGGGCTCCAAAGAAGGAGTCGAGCCTCGATTAAGGAGAGGTTGTTCAAGGGCTCCATTGGCTTCAGGGGAGGCTCTATAGTGTACTTTGTTCAAGGGGAGGATTGTTGGGAGGGAAGTCCTACATCGACTAATGGAGGGGTTGATCATGGGTTTATAAGTAAGGAATACCTCTCTATATTGGTATGAGGCCTTTTGGGGAAACTAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTCCTAACCTGTACCTGTTATCATTTAATTTTCCTTTGAGGAGTTAGTTATCGCTTTTGAAGTTCAAGTTGCAAGCTATTCCTTCATTTTAATAGTCTCTCAAGGAGCAAAAAATTTTACGATTTACTAGAGCTCTCCAAAATAATATATCTTGGTTAATGGTCTCCTTATCACTTTTGAAGTTCAAGTTCCTAATTTTTACGATTTACTAGAACTTGTTTGTTTTGTCTCATTGTCTTCAAGAGCCTCTCTGTAATTCCCCATAGCCGTTGGAGGTTATATTATCTTCACATCCTCTTCTTCTTGTGTAACCTTGCTTGGTTAGAAAGATATTTCTTACCTAGAAAAATTATTGATGATTGAAGTTTACAAAAGGGATGTATATTCTATGAAGTTTACAAAAGACCTTCCCAATTTACAATGAGGGACGTATAACTATCGGAAGTAAAAATATTAGACAGTTTACACCAAGATATAGCTTGGTAAACAACATTGTCGAAAAGTTTTGTGTAGGTATGTGTCTTTTCTGCAAATATTCTCTGATTTCTTTCTTTCCACATATTCCAAAAGAAAATCATGATGAAGTTTTTCCATAATAGGGATTTTGCATTCTTGAAAGGGTGGTACGTTAAGGCCATATCCAAAAAATCCTTTACCTCCCTAAGAAATGTGAGATGGCATCCGAATATATTGAGAATCGTTGTCTAAAAATTCTGAGCATATGTGCATTGCATAAACAAGTAGCTTTGTCATTCGTTTTCTTTCTTGCATAATGGACACCAATTTGGACACCAATTTGGACACCAATTTGGAGAAAGTTGTTTGTGAATGGCTTATTTTGATTTCTACTTTGCTAAGCATCATGATTCATGATATTTAGTCAGTCATTCTCCAATCTTTCAGCTAGGCTTTGTCATTCATCTAATGCATAAGTTTTACCTGTTTTCTCTAGCTTTCTTCTCTCAGATACTTAAAACTTCTGTATCCATGGCAGCTCGTTAGATCCCGAGTTACAAAAGGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAACAACTTCACACAGTAGCATGGGTACCTGATTTTCATATGGGAAGAGAATGCCTGATTATAAGTGCAGGATTTGATCATTTAGATTGATTGCTTAATGAGATATTTCTTTCATTCTGCTTGCATTTTGTGTTTCTGCAAGTGAATCCTGTTTCTTGCACTTGGAACTTTCTGCCAGATTTGTTTGTCAACAAAACAAACATGTGGTACTCGTTTAGTATGAGCCAAGGGGTCTATCTATATCGATGTCTCAAATGATTATTGGAACTCATTGAGCTATGACAACAATCTTATGTAGCTCATAATGCAGGTTTATTGAATTTTGTAGCCTATAATGAGTTGTTTTTGTTTCAAAAGAAGTTTATGCTGTTATGGTGATAAAAGAAAAAGAATTGATGAAAAAGTGCATATACTCGCATTTGCCTAGCGCTCTA

mRNA sequence

AAAAGCGAGTGGCGGCCGAGATTGAGGCATGTTGGAGAGAGTGAGAGGACGCCGCTGGTTGAAGGGATAGTAGAGGAATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTCCATTTCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGACTCGCCCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATGTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGATGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGGTTGTTTGAGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGCTCGTTAGATCCCGAGTTACAAAAGGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAACAACTTCACACAGTAGCATGGGTACCTGATTTTCATATGGGAAGAGAATGCCTGATTATAAGTGCAGGATTTGATCATTTAGATTGATTGCTTAATGAGATATTTCTTTCATTCTGCTTGCATTTTGTGTTTCTGCAAGTGAATCCTGTTTCTTGCACTTGGAACTTTCTGCCAGATTTGTTTGTCAACAAAACAAACATGTGGTACTCGTTTAGTATGAGCCAAGGGGTCTATCTATATCGATGTCTCAAATGATTATTGGAACTCATTGAGCTATGACAACAATCTTATGTAGCTCATAATGCAGGTTTATTGAATTTTGTAGCCTATAATGAGTTGTTTTTGTTTCAAAAGAAGTTTATGCTGTTATGGTGATAAAAGAAAAAGAATTGATGAAAAAGTGCATATACTCGCATTTGCCTAGCGCTCTA

Coding sequence (CDS)

ATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTCCATTTCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGACTCGCCCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATGTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAGCTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGATGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGGTTGTTTGAGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGCTCGTTAGATCCCGAGTTACAAAAGGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAA

Protein sequence

MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRDVVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGHGGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVESLIAKRQQNEL

Homology

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BLAST of Carg24990 vs. NCBI nr
Match: KAG6603196.1 (hypothetical protein SDJN03_03805, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033506.1 hypothetical protein SDJN02_03228 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.1 bits (1063), Expect = 7.3e-112
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH
Sbjct: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH
Sbjct: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 208

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BLAST of Carg24990 vs. NCBI nr
Match: XP_022928687.1 (uncharacterized protein LOC111435528 [Cucurbita moschata])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDS KSRD
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSLKSRD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVS+DGH
Sbjct: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSEDGH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS CLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH
Sbjct: 121 GGSPFKIYNAYYLQSSACLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 208

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BLAST of Carg24990 vs. NCBI nr
Match: XP_023544221.1 (uncharacterized protein LOC111803860 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.8 bits (1039), Expect = 4.4e-109
Identity = 203/208 (97.60%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPL+FGREGAFSREILMKICVSKPGVSSLLQFDCGVS+DGH
Sbjct: 61  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVSSLLQFDCGVSEDGH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS CLSPSVYRGPLFSSLDPELQKALK FLISRGVEESLTDFL+IH
Sbjct: 121 GGSPFKIYNAYYLQSSACLSPSVYRGPLFSSLDPELQKALKEFLISRGVEESLTDFLIIH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 208

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BLAST of Carg24990 vs. NCBI nr
Match: XP_022967898.1 (uncharacterized protein LOC111467274 [Cucurbita maxima])

HSP 1 Score: 399.1 bits (1024), Expect = 2.4e-107
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSST FQNHEQKGSSSDFAVEHDS KSRD
Sbjct: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPL+FGREGAFSREILMKICVSKPGV+SLLQFDCGVS+DGH
Sbjct: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS CL PSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH
Sbjct: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 197 LHKKEQGQYLNWLQNVESLIAKRQQNEL 224

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BLAST of Carg24990 vs. NCBI nr
Match: XP_022153881.1 (mitochondrial acidic protein mam33 [Momordica charantia])

HSP 1 Score: 344.0 bits (881), Expect = 9.2e-91
Identity = 173/208 (83.17%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEI HELSST FQ+ ++ G S DF VEHDSPKS+D
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEITHELSSTRFQS-DESGCSRDFVVEHDSPKSQD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEE+A+SALSGPL FGREGAF REILMKICVSKPGV S+LQFDCGVS+D H
Sbjct: 61  VVLRRKLESGEEVAVSALSGPLRFGREGAFPREILMKICVSKPGVGSILQFDCGVSEDHH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS  L  SVYRGP FSSLDP LQ ALK +LISRGVEESLT+FLL+H
Sbjct: 121 GGSPFKIYNAYYLQSSANLGSSVYRGPFFSSLDPRLQDALKDYLISRGVEESLTNFLLLH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           +HKKEQGQYLNWLQN+ESL+AK Q NEL
Sbjct: 181 VHKKEQGQYLNWLQNLESLVAKGQPNEL 207

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BLAST of Carg24990 vs. ExPASy Swiss-Prot
Match: O94675 (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 100 VSKPGVSSLLQFDCGVSDDGHGGSPFKIYNAYYLQSSGCLSP----------SVYRGPLF 159
           +SKPG  +L+ F+    DDG     F I N Y+ +    L+             Y GP F
Sbjct: 164 ISKPGNGALV-FEATALDDG-----FDIENIYFSKDIDMLTSDSLEAEWKRRKQYLGPSF 223

Query: 160 SSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVESLI 201
             LDPELQ     +L  R ++ESL+ F++     KE  +Y+NWL++V   +
Sbjct: 224 KELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268

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BLAST of Carg24990 vs. ExPASy Swiss-Prot
Match: P40513 (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAM33 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 143 VYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVE 198
           VY GP FS+LD ELQ++L+ +L SRGV E L  F+  +   KE  +Y++WL+ ++
Sbjct: 208 VYHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMK 262

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BLAST of Carg24990 vs. ExPASy TrEMBL
Match: A0A6J1EKM2 (uncharacterized protein LOC111435528 OS=Cucurbita moschata OX=3662 GN=LOC111435528 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.3e-110
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDS KSRD
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSLKSRD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVS+DGH
Sbjct: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSEDGH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS CLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH
Sbjct: 121 GGSPFKIYNAYYLQSSACLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 208

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BLAST of Carg24990 vs. ExPASy TrEMBL
Match: A0A6J1HWH3 (uncharacterized protein LOC111467274 OS=Cucurbita maxima OX=3661 GN=LOC111467274 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 201/208 (96.63%), Postives = 204/208 (98.08%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEINHELSST FQNHEQKGSSSDFAVEHDS KSRD
Sbjct: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEEIAISALSGPL+FGREGAFSREILMKICVSKPGV+SLLQFDCGVS+DGH
Sbjct: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS CL PSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH
Sbjct: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           LHKKEQGQYLNWLQNVESLIAKRQQNEL
Sbjct: 197 LHKKEQGQYLNWLQNVESLIAKRQQNEL 224

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BLAST of Carg24990 vs. ExPASy TrEMBL
Match: A0A6J1DM07 (mitochondrial acidic protein mam33 OS=Momordica charantia OX=3673 GN=LOC111021294 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 173/208 (83.17%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPRANQIFRKARKALHDLDLLKILQSEI HELSST FQ+ ++ G S DF VEHDSPKS+D
Sbjct: 1   MPRANQIFRKARKALHDLDLLKILQSEITHELSSTRFQS-DESGCSRDFVVEHDSPKSQD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRKLESGEE+A+SALSGPL FGREGAF REILMKICVSKPGV S+LQFDCGVS+D H
Sbjct: 61  VVLRRKLESGEEVAVSALSGPLRFGREGAFPREILMKICVSKPGVGSILQFDCGVSEDHH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFKIYNAYYLQSS  L  SVYRGP FSSLDP LQ ALK +LISRGVEESLT+FLL+H
Sbjct: 121 GGSPFKIYNAYYLQSSANLGSSVYRGPFFSSLDPRLQDALKDYLISRGVEESLTNFLLLH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQQNEL 209
           +HKKEQGQYLNWLQN+ESL+AK Q NEL
Sbjct: 181 VHKKEQGQYLNWLQNLESLVAKGQPNEL 207

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BLAST of Carg24990 vs. ExPASy TrEMBL
Match: A0A1S3BK83 (uncharacterized protein LOC103490527 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490527 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79
Identity = 153/194 (78.87%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M R  Q+FRKARK   DL LL+ILQSEI HELSSTP QN+E   SSS F VEHDS KS+D
Sbjct: 1   MVRTTQLFRKARKTFQDLRLLQILQSEIAHELSSTPCQNYENNASSSHFTVEHDSLKSQD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRRK++SGEE+ ISAL GPL FG +GAF REILMKICVSKPGVSSLLQFDCGVS+DGH
Sbjct: 61  VVLRRKMDSGEEVVISALLGPLRFGYDGAFPREILMKICVSKPGVSSLLQFDCGVSEDGH 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
           GGSPFK+YNAYYL+SS CL P VYRGP FSSLDP LQ ALK +LISRGVEESLT+FLLIH
Sbjct: 121 GGSPFKLYNAYYLRSSDCLGP-VYRGPSFSSLDPRLQDALKEYLISRGVEESLTNFLLIH 180

Query: 181 LHKKEQGQYLNWLQ 195
           LHKKEQGQYLNWL+
Sbjct: 181 LHKKEQGQYLNWLK 193

[Close]

BLAST of Carg24990 vs. ExPASy TrEMBL
Match: A0A7N2M2K1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.9e-70
Identity = 133/204 (65.20%), Postives = 167/204 (81.86%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           MPR   I RKARKAL D DL+K LQ+EI HELSSTPFQ+ +Q  S  DF VE DSP+S+D
Sbjct: 1   MPRVTPILRKARKALQDSDLVKALQTEITHELSSTPFQD-DQSHSPGDFVVEWDSPQSQD 60

Query: 61  VVLRRKLESGEEIAISALSGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDDGH 120
           VVLRR  ESGEE+A+SA+ GP+ +G+EG F R++LMK+C+ KPG+SS+LQFDCGV + G+
Sbjct: 61  VVLRRNCESGEEVAVSAVLGPVTYGKEGVFPRDVLMKVCLKKPGLSSMLQFDCGVFEGGN 120

Query: 121 GGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 180
            GS F I+NAYY+QS  C+SPS YRGPLFSSLDP+LQ ALK +L++RG+ ESLT+FLL H
Sbjct: 121 EGSQFDIHNAYYIQSPTCVSPSDYRGPLFSSLDPQLQDALKEYLVARGIGESLTNFLLHH 180

Query: 181 LHKKEQGQYLNWLQNVESLIAKRQ 205
           LHKKEQGQY+NWL+ +ES +AK +
Sbjct: 181 LHKKEQGQYVNWLKILESSVAKSE 203

[Close]

BLAST of Carg24990 vs. TAIR 10
Match: AT2G41600.3 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.5e-46
Identity = 95/203 (46.80%), Postives = 136/203 (67.00%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DSP+S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVE-TGSLGDFKLDWDSPESQD 60

Query: 61  VVLRRKLESGEEIAISAL--SGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDD 120
           +VL+R+ +SGE++ +SAL    P+    +  F RE   K+C+ KPG+SS+LQF C V + 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 121 GHGGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLL 180
           G G S F I +AY+++S      S Y    FS +DP+L  AL+ +LIS+GV E LT+FLL
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFFSQVDPKLHSALEQYLISKGVSEGLTNFLL 180

Query: 181 IHLHKKEQGQYLNWLQNVESLIA 202
            HL+KKEQ QY+NWL+ +ES ++
Sbjct: 181 CHLNKKEQDQYVNWLRRLESTMS 202

[Close]

BLAST of Carg24990 vs. TAIR 10
Match: AT2G41600.5 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.5e-46
Identity = 95/203 (46.80%), Postives = 136/203 (67.00%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DSP+S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVE-TGSLGDFKLDWDSPESQD 60

Query: 61  VVLRRKLESGEEIAISAL--SGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDD 120
           +VL+R+ +SGE++ +SAL    P+    +  F RE   K+C+ KPG+SS+LQF C V + 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 121 GHGGSPFKIYNAYYLQSSGCLSPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLL 180
           G G S F I +AY+++S      S Y    FS +DP+L  AL+ +LIS+GV E LT+FLL
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFFSQVDPKLHSALEQYLISKGVSEGLTNFLL 180

Query: 181 IHLHKKEQGQYLNWLQNVESLIA 202
            HL+KKEQ QY+NWL+ +ES ++
Sbjct: 181 CHLNKKEQDQYVNWLRRLESTMS 202

[Close]

BLAST of Carg24990 vs. TAIR 10
Match: AT2G41600.2 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DSP+S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVE-TGSLGDFKLDWDSPESQD 60

Query: 61  VVLRRKLESGEEIAISAL--SGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDD 120
           +VL+R+ +SGE++ +SAL    P+    +  F RE   K+C+ KPG+SS+LQF C V + 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 121 GHGGSPFKIYNAYYLQSSGCLSPSVYRGPLFSS 152
           G G S F I +AY+++S      S Y    F S
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFFRS 152

[Close]

BLAST of Carg24990 vs. TAIR 10
Match: AT2G41600.1 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DSP+S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVE-TGSLGDFKLDWDSPESQD 60

Query: 61  VVLRRKLESGEEIAISAL--SGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDD 120
           +VL+R+ +SGE++ +SAL    P+    +  F RE   K+C+ KPG+SS+LQF C V + 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 121 GHGGSPFKIYNAYYLQSSGCLSPSVYRGPLF 150
           G G S F I +AY+++S      S Y    F
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFF 150

[Close]

BLAST of Carg24990 vs. TAIR 10
Match: AT2G41600.4 (Mitochondrial glycoprotein family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 1   MPRANQIFRKARKALHDLDLLKILQSEINHELSSTPFQNHEQKGSSSDFAVEHDSPKSRD 60
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DSP+S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVE-TGSLGDFKLDWDSPESQD 60

Query: 61  VVLRRKLESGEEIAISAL--SGPLMFGREGAFSREILMKICVSKPGVSSLLQFDCGVSDD 120
           +VL+R+ +SGE++ +SAL    P+    +  F RE   K+C+ KPG+SS+LQF C V + 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 121 GHGGSPFKIYNAYYLQSSGCLSPSVYRGPLF 150
           G G S F I +AY+++S      S Y    F
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFF 150

The following BLAST results are available for this feature:

BLAST of Carg24990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603196.1	7.3e-112	100.00	hypothetical protein SDJN03_03805, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928687.1	1.5e-109	98.56	uncharacterized protein LOC111435528 [Cucurbita moschata]	[more]
XP_023544221.1	4.4e-109	97.60	uncharacterized protein LOC111803860 [Cucurbita pepo subsp. pepo]	[more]
XP_022967898.1	2.4e-107	96.63	uncharacterized protein LOC111467274 [Cucurbita maxima]	[more]
XP_022153881.1	9.2e-91	83.17	mitochondrial acidic protein mam33 [Momordica charantia]	[more]

BLAST of Carg24990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O94675	2.7e-08	33.33	Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]
P40513	1.7e-07	45.45	Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]

BLAST of Carg24990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKM2	7.3e-110	98.56	uncharacterized protein LOC111435528 OS=Cucurbita moschata OX=3662 GN=LOC1114355...	[more]
A0A6J1HWH3	1.2e-107	96.63	uncharacterized protein LOC111467274 OS=Cucurbita maxima OX=3661 GN=LOC111467274...	[more]
A0A6J1DM07	4.5e-91	83.17	mitochondrial acidic protein mam33 OS=Momordica charantia OX=3673 GN=LOC11102129...	[more]
A0A1S3BK83	6.7e-79	78.87	uncharacterized protein LOC103490527 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A7N2M2K1	1.9e-70	65.20	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Carg24990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41600.3	2.5e-46	46.80	Mitochondrial glycoprotein family protein	[more]
AT2G41600.5	2.5e-46	46.80	Mitochondrial glycoprotein family protein	[more]
AT2G41600.2	1.2e-27	43.14	Mitochondrial glycoprotein family protein	[more]
AT2G41600.1	2.6e-27	43.05	Mitochondrial glycoprotein family protein	[more]
AT2G41600.4	2.6e-27	43.05	Mitochondrial glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036561	Mitochondrial glycoprotein superfamily	GENE3D	3.10.280.10	Mitochondrial glycoprotein	coord: 9..79 e-value: 6.4E-6 score: 28.0 coord: 85..200 e-value: 3.7E-22 score: 81.2
IPR036561	Mitochondrial glycoprotein superfamily	SUPERFAMILY	54529	Mitochondrial glycoprotein MAM33-like	coord: 17..200
IPR003428	Mitochondrial glycoprotein	PFAM	PF02330	MAM33	coord: 96..198 e-value: 9.9E-17 score: 61.6
IPR003428	Mitochondrial glycoprotein	PANTHER	PTHR10826	COMPLEMENT COMPONENT 1	coord: 1..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..56
None	No IPR available	PANTHER	PTHR10826:SF7	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24990-RA	Carg24990-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005759	mitochondrial matrix