Carg24721 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24721
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NAC domain-containing protein
Location	Carg_Chr01: 10467156 .. 10469345 (-)
RNA-Seq Expression	Carg24721
Synteny	Carg24721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTAATGCTACCAGGGTTTCGATTTCACCCGACCGACGAAGAGCTCATCGGGTTTTATCTTTGACGAAAGGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAGTAAGAAACTTTCGAACGTTTAAGGTGATAGGGTATGGTATATTTAATCTTTTGAACGTATTCTTAACGATAATTTGACGTTTTTTTGTCGGTGAAGAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTAGGCTTCCCTTCAACACAAATAGCCCTCAACACTATCATGCTGTAAGACTTCTTAATTTCCCTCTTTTTTTCCATTTAATTTTCTCGTGACGGATACGTAGGGTTCTCGAGACTTACAGATACATGGTTCTACGTATCGGTTGTTGAATATATGTTCGTTTACGTTTAGGTCATTTTTTAGTAAAATAAATTTGGTTATATGGGTTAACTCTACCGTAGAAGGTACATAAATCCCATTGAAGCGGGTTCTATTCGTTAATATTTCTCCTGTTTTTTTGTGTAACTTTCTCTCTCAGTGACCGATATGAGACTCCATATCAGTTGGGGAGGAGAACGAAACATCCTTTATAAGGGCGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAAACCTTGAGAGGAAACTCGAAAAGAAAATCTCAAAAAGGACAATGTCTGCTAGCGGTAGGCTTGAGCCGTTACAAATGGTATAAGAACCAAACATTGGACGATGTGCCAGCGAGGAAGCTGTTCCCCGAAGGGGGTAGACACAAGGTTGTGTGTCAGTAAAGACGATGGACCCCAACAGGGGGTGGATTTAGTAGGGGTCCTACATCGATTGGAGAAAGGAACAAGTGTCACCGAGGACGCTGGGCCCTAAAGAGGGGTATATTGTGAGATCCCACTCTTTTAAAGAGTGTGGAAACCAGAGTACCTCCAACTTAAATTAATTAAATGTGATTATAAATCCAATATTTAATTATATCTCTTTTATTTATTTATATATTTACACGTTATTTAGGTTTGAAGGACAAAAAAGTCTTTTTACAAGGTGACATCATCTATTTTTATTAATTTAAATCGTTGATATAGAAGAAATAATTATTTTTATTTAAATTCAACACTACAAAACCATACTTTTCAATTGGACTCAATTTTCACCTTACTATTCTTATTAAATAATTATTGACGTTTTTACTTTCTTGCCCTTCCTTTGAAAAAAAGAAAAGCCCTTGAAGTTTCTTGAATGAGACCTTTATCTTTATTATCTTTTATTCAAAACATTTGACTTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCTTAGTTCACATAATTTATGCTTCTCGGGTCGGTTTTTTAATTTAATGGACAATAATTTATTATCTAAAAAATATATTTTAACAGTGAAAAATGTGCTTCTCGATTGTTTAATGAAATAATGTCTTTTTTATTTAAAAAAATTTTGGGTCGAGTAATTATTATTTATTTATTTAATTATTTAATTATGTTTTTTTTTATTTGAAATATGCAGGAGGTTTGGGACCTTATGTAGAATCTTCAGAAGAATCCCATCAATTAGAAAGTACAGTCCAATAATGTCTCCATACCCTAAGTATCCAAAACCCTAATAATAACTCCTTTCAATCTCACCCTTTTCCAACTCTCATAGACCTTGAAACTAAGCCAAACCCTAGCTTAACCCTACCCTATGCCTCCTTTGAACCCTCTTTTTTTGTACCCGTCGAGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG

mRNA sequence

ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG

Coding sequence (CDS)

ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG

Protein sequence

MEVPSKLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAAFWNGIDGGGARGGRDGGGGGGDIFTSGGWDELQLVVQMSPSTLFNI

Homology

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BLAST of Carg24721 vs. NCBI nr
Match: KAG7037501.1 (Transcription factor JUNGBRUNNEN 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 4.0e-83
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKY 60
           MEVPSKLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKY
Sbjct: 1   MEVPSKLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKY 60

Query: 61  RNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAAFWNGIDGGGAR 120
           RNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAAFWNGIDGGGAR
Sbjct: 61  RNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAAFWNGIDGGGAR 120

Query: 121 GGRDGGGGGGDIFTSGGWDELQLVVQMSPSTLFNI 156
           GGRDGGGGGGDIFTSGGWDELQLVVQMSPSTLFNI
Sbjct: 121 GGRDGGGGGGDIFTSGGWDELQLVVQMSPSTLFNI 155

[Close]

BLAST of Carg24721 vs. NCBI nr
Match: XP_022981711.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita maxima])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 144/268 (53.73%), Postives = 150/268 (55.97%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEVPSKLVDVEEEDE                       V+KKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVPSKLVDVEEEDEVMLPGFRFHPTDEELIGFYLRRKVKKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 120
           DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

Query: 121 KKSLVYYRGSA------------------------------------------------- 156
           KKSLVYYRGSA                                                 
Sbjct: 121 KKSLVYYRGSAGKGTKTDWMMHEFRLPSNTNSPEQYHEEVWTLCRIFRRIPSIRKYSPII 180

[Close]

BLAST of Carg24721 vs. NCBI nr
Match: XP_023523438.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 6.9e-59
Identity = 142/273 (52.01%), Postives = 147/273 (53.85%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEVPSKLVDVEEEDE                       VEKKPIAIEIIKQ+DIYKYDPW
Sbjct: 1   MEVPSKLVDVEEEDEVMLPGFRFHPTDEELIGFYLRRKVEKKPIAIEIIKQIDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 120
           DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVT SGFWKATGIDKPIFSTLK NQECIGL
Sbjct: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTESGFWKATGIDKPIFSTLKPNQECIGL 120

Query: 121 KKSLVYYRGSA------------------------------------------------- 156
           KKSLVYYRGSA                                                 
Sbjct: 121 KKSLVYYRGSAGKGTKTDWMMHEFRLPFNTNSPQHYHAEVWTLCRIFRRIPSIRKYSPIM 180

[Close]

BLAST of Carg24721 vs. NCBI nr
Match: XP_022941189.1 (transcription factor JUNGBRUNNEN 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 9.4e-48
Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEV SKLV VEEEDE                       VEKKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVLSKLVGVEEEDEVMLPGFRFHPTDEELIGFYLRRKVEKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 109
           DLPKVSN+GEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNMGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

[Close]

BLAST of Carg24721 vs. NCBI nr
Match: XP_022941190.1 (transcription factor JUNGBRUNNEN 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 9.4e-48
Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEV SKLV VEEEDE                       VEKKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVLSKLVGVEEEDEVMLPGFRFHPTDEELIGFYLRRKVEKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 109
           DLPKVSN+GEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNMGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

[Close]

BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9SK55 (Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 15  EVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGF 74
           +VE K I +E+IKQ+DIYKYDPWDLP+VS+VGEKEWYFFC RGRKYRNS+RPNRVTGSGF
Sbjct: 39  KVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGF 98

Query: 75  WKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSA 109
           WKATGIDKP++    SN +C+GLKKSLVYY GSA
Sbjct: 99  WKATGIDKPVY----SNLDCVGLKKSLVYYLGSA 128

[Close]

BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9ZVH0 (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.3e-35
Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 6   KLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIR 65
           +LV    + +V+  P++IE+I+QLDIYKYDPWDLPK +  GEKEWYF+C R RKYRNS R
Sbjct: 28  ELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSR 87

Query: 66  PNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAA 110
           PNRVTG+GFWKATG D+PI+S+     +CIGLKKSLV+Y+G AA
Sbjct: 88  PNRVTGAGFWKATGTDRPIYSS--EGNKCIGLKKSLVFYKGRAA 129

[Close]

BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9FIW5 (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANAC094 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.9e-33
Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 6   KLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIR 65
           +LV    + +V  K +  ++IK++DIYKYDPWDLPK++ +GEKEWYF+C R RKYRNS R
Sbjct: 32  ELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTR 91

Query: 66  PNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAA 110
           PNRVTG GFWKATG D+PI+S    +  CIGLKKSLV+YRG AA
Sbjct: 92  PNRVTGGGFWKATGTDRPIYSL--DSTRCIGLKKSLVFYRGRAA 133

[Close]

BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26
Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 20  PIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATG 79
           P+ + II ++D+YK+DPWDLP+ +N GE+EWYFF  R RKY N  RPNR   SG+WKATG
Sbjct: 55  PLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATG 114

Query: 80  IDKPIFSTLKSNQECIGLKKSLVYYRG 107
            DKPI S+  S +E +G+KK+LV+YRG
Sbjct: 115 TDKPIMSS-GSTREKVGVKKALVFYRG 140

[Close]

BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25
Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 20  PIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATG 79
           P+ + II ++D+YK+DPW+LP+ +N GE+EWYFF  R RKY N  RPNR   SG+WKATG
Sbjct: 55  PLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATG 114

Query: 80  IDKPIFSTLKSNQECIGLKKSLVYYRG 107
            DKPI ++  S +E +G+KK+LV+YRG
Sbjct: 115 TDKPIMAS-GSTREKVGVKKALVFYRG 140

[Close]

BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1IXB3 (transcription factor JUNGBRUNNEN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480775 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 144/268 (53.73%), Postives = 150/268 (55.97%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEVPSKLVDVEEEDE                       V+KKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVPSKLVDVEEEDEVMLPGFRFHPTDEELIGFYLRRKVKKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 120
           DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

Query: 121 KKSLVYYRGSA------------------------------------------------- 156
           KKSLVYYRGSA                                                 
Sbjct: 121 KKSLVYYRGSAGKGTKTDWMMHEFRLPSNTNSPEQYHEEVWTLCRIFRRIPSIRKYSPII 180

[Close]

BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1FMK0 (transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446567 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.5e-48
Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEV SKLV VEEEDE                       VEKKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVLSKLVGVEEEDEVMLPGFRFHPTDEELIGFYLRRKVEKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 109
           DLPKVSN+GEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNMGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

[Close]

BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1FSV4 (transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446567 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.5e-48
Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MEVPSKLVDVEEEDE-----------------------VEKKPIAIEIIKQLDIYKYDPW 60
           MEV SKLV VEEEDE                       VEKKPIAIEIIKQLDIYKYDPW
Sbjct: 1   MEVLSKLVGVEEEDEVMLPGFRFHPTDEELIGFYLRRKVEKKPIAIEIIKQLDIYKYDPW 60

Query: 61  DLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGL 109
           DLPKVSN+GEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDK IFSTLK NQECIGL
Sbjct: 61  DLPKVSNMGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKSIFSTLKPNQECIGL 120

[Close]

BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A1S3CTC4 (transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504119 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 96/142 (67.61%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MEVPSKLVD--VEEEDE------------------------VEKKPIAIEIIKQLDIYKY 60
           MEV SKL+D  V+ ED+                        VEKKPIAIEIIKQ+DIYKY
Sbjct: 1   MEVTSKLMDIVVDHEDDQIILPGFRFHPTDEELVGFYLRRKVEKKPIAIEIIKQIDIYKY 60

Query: 61  DPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLK----- 109
           DPWDLPKVSNVG+KEWYFFC RGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLK     
Sbjct: 61  DPWDLPKVSNVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKLSSND 120

[Close]

BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A1S3CS33 (transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504119 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 96/142 (67.61%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 1   MEVPSKLVD--VEEEDE------------------------VEKKPIAIEIIKQLDIYKY 60
           MEV SKL+D  V+ ED+                        VEKKPIAIEIIKQ+DIYKY
Sbjct: 1   MEVTSKLMDIVVDHEDDQIILPGFRFHPTDEELVGFYLRRKVEKKPIAIEIIKQIDIYKY 60

Query: 61  DPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLK----- 109
           DPWDLPKVSNVG+KEWYFFC RGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLK     
Sbjct: 61  DPWDLPKVSNVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKLSSND 120

[Close]

BLAST of Carg24721 vs. TAIR 10
Match: AT2G43000.1 (NAC domain containing protein 42 )

HSP 1 Score: 164.1 bits (414), Expect = 9.1e-41
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 15  EVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGF 74
           +VE K I +E+IKQ+DIYKYDPWDLP+VS+VGEKEWYFFC RGRKYRNS+RPNRVTGSGF
Sbjct: 39  KVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGF 98

Query: 75  WKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSA 109
           WKATGIDKP++    SN +C+GLKKSLVYY GSA
Sbjct: 99  WKATGIDKPVY----SNLDCVGLKKSLVYYLGSA 128

[Close]

BLAST of Carg24721 vs. TAIR 10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 5.2e-36
Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 6   KLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIR 65
           +LV    + +V+  P++IE+I+QLDIYKYDPWDLPK +  GEKEWYF+C R RKYRNS R
Sbjct: 35  ELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSR 94

Query: 66  PNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAA 110
           PNRVTG+GFWKATG D+PI+S+     +CIGLKKSLV+Y+G AA
Sbjct: 95  PNRVTGAGFWKATGTDRPIYSS--EGNKCIGLKKSLVFYKGRAA 136

[Close]

BLAST of Carg24721 vs. TAIR 10
Match: AT5G39820.1 (NAC domain containing protein 94 )

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34
Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 6   KLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIR 65
           +LV    + +V  K +  ++IK++DIYKYDPWDLPK++ +GEKEWYF+C R RKYRNS R
Sbjct: 32  ELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTR 91

Query: 66  PNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAA 110
           PNRVTG GFWKATG D+PI+S    +  CIGLKKSLV+YRG AA
Sbjct: 92  PNRVTGGGFWKATGTDRPIYSL--DSTRCIGLKKSLVFYRGRAA 133

[Close]

BLAST of Carg24721 vs. TAIR 10
Match: AT3G12910.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 66/92 (71.74%), Postives = 74/92 (80.43%), Query Frame = 0


Query: 24  EIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKP 83
           EI+ Q+DIYK+DPWDLP+  N  EKE YFFC RGRKYRNSIRPNRVTGSGFWKATGIDKP
Sbjct: 53  EIVSQIDIYKFDPWDLPRSRNT-EKESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKP 112

Query: 84  IFSTLKSNQECIGLKKSLVYYRGSAAFWNGID 116
           ++S   SN+  IGLKK+LVYY GSA   N  D
Sbjct: 113 VYSD-GSNKAVIGLKKTLVYYLGSAGKGNKTD 142

[Close]

BLAST of Carg24721 vs. TAIR 10
Match: AT2G02450.1 (NAC domain containing protein 35 )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 6   KLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIR 65
           +L++     +VE K   +E+I  LD+Y+YDPW+LP ++ +GEKEWYF+  R RKYRN  R
Sbjct: 63  ELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDR 122

Query: 66  PNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSA 109
           PNRVT SG+WKATG D+ I S        IGLKK+LV+Y G A
Sbjct: 123 PNRVTTSGYWKATGADRMIRS---ETSRPIGLKKTLVFYSGKA 162

The following BLAST results are available for this feature:

BLAST of Carg24721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037501.1	4.0e-83	100.00	Transcription factor JUNGBRUNNEN 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022981711.1	1.1e-61	53.73	transcription factor JUNGBRUNNEN 1-like [Cucurbita maxima]	[more]
XP_023523438.1	6.9e-59	52.01	transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941189.1	9.4e-48	78.63	transcription factor JUNGBRUNNEN 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022941190.1	9.4e-48	78.63	transcription factor JUNGBRUNNEN 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg24721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK55	1.3e-39	77.66	Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 ...	[more]
Q9ZVH0	7.3e-35	64.42	Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1	[more]
Q9FIW5	8.9e-33	62.50	Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANA...	[more]
Q8H4S4	3.6e-26	58.62	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
A2YMR0	2.3e-25	56.32	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]

BLAST of Carg24721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXB3	5.5e-62	53.73	transcription factor JUNGBRUNNEN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480...	[more]
A0A6J1FMK0	4.5e-48	78.63	transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1FSV4	4.5e-48	78.63	transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A1S3CTC4	1.4e-41	67.61	transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3CS33	1.4e-41	67.61	transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Carg24721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43000.1	9.1e-41	77.66	NAC domain containing protein 42	[more]
AT1G26870.1	5.2e-36	64.42	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G39820.1	6.3e-34	62.50	NAC domain containing protein 94	[more]
AT3G12910.1	1.6e-32	71.74	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G02450.1	1.8e-25	52.43	NAC domain containing protein 35	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 21..106 e-value: 5.3E-18 score: 66.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 1..155 score: 25.718021
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 5..115 e-value: 3.0E-32 score: 113.5
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 17..108
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 15..109
None	No IPR available	PANTHER	PTHR31744:SF65	CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED	coord: 15..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24721-RA	Carg24721-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding