Carg24721 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTAATGCTACCAGGGTTTCGATTTCACCCGACCGACGAAGAGCTCATCGGGTTTTATCTTTGACGAAAGGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAGTAAGAAACTTTCGAACGTTTAAGGTGATAGGGTATGGTATATTTAATCTTTTGAACGTATTCTTAACGATAATTTGACGTTTTTTTGTCGGTGAAGAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGGTAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTAGGCTTCCCTTCAACACAAATAGCCCTCAACACTATCATGCTGTAAGACTTCTTAATTTCCCTCTTTTTTTCCATTTAATTTTCTCGTGACGGATACGTAGGGTTCTCGAGACTTACAGATACATGGTTCTACGTATCGGTTGTTGAATATATGTTCGTTTACGTTTAGGTCATTTTTTAGTAAAATAAATTTGGTTATATGGGTTAACTCTACCGTAGAAGGTACATAAATCCCATTGAAGCGGGTTCTATTCGTTAATATTTCTCCTGTTTTTTTGTGTAACTTTCTCTCTCAGTGACCGATATGAGACTCCATATCAGTTGGGGAGGAGAACGAAACATCCTTTATAAGGGCGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAAACCTTGAGAGGAAACTCGAAAAGAAAATCTCAAAAAGGACAATGTCTGCTAGCGGTAGGCTTGAGCCGTTACAAATGGTATAAGAACCAAACATTGGACGATGTGCCAGCGAGGAAGCTGTTCCCCGAAGGGGGTAGACACAAGGTTGTGTGTCAGTAAAGACGATGGACCCCAACAGGGGGTGGATTTAGTAGGGGTCCTACATCGATTGGAGAAAGGAACAAGTGTCACCGAGGACGCTGGGCCCTAAAGAGGGGTATATTGTGAGATCCCACTCTTTTAAAGAGTGTGGAAACCAGAGTACCTCCAACTTAAATTAATTAAATGTGATTATAAATCCAATATTTAATTATATCTCTTTTATTTATTTATATATTTACACGTTATTTAGGTTTGAAGGACAAAAAAGTCTTTTTACAAGGTGACATCATCTATTTTTATTAATTTAAATCGTTGATATAGAAGAAATAATTATTTTTATTTAAATTCAACACTACAAAACCATACTTTTCAATTGGACTCAATTTTCACCTTACTATTCTTATTAAATAATTATTGACGTTTTTACTTTCTTGCCCTTCCTTTGAAAAAAAGAAAAGCCCTTGAAGTTTCTTGAATGAGACCTTTATCTTTATTATCTTTTATTCAAAACATTTGACTTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATCTTAGTTCACATAATTTATGCTTCTCGGGTCGGTTTTTTAATTTAATGGACAATAATTTATTATCTAAAAAATATATTTTAACAGTGAAAAATGTGCTTCTCGATTGTTTAATGAAATAATGTCTTTTTTATTTAAAAAAATTTTGGGTCGAGTAATTATTATTTATTTATTTAATTATTTAATTATGTTTTTTTTTATTTGAAATATGCAGGAGGTTTGGGACCTTATGTAGAATCTTCAGAAGAATCCCATCAATTAGAAAGTACAGTCCAATAATGTCTCCATACCCTAAGTATCCAAAACCCTAATAATAACTCCTTTCAATCTCACCCTTTTCCAACTCTCATAGACCTTGAAACTAAGCCAAACCCTAGCTTAACCCTACCCTATGCCTCCTTTGAACCCTCTTTTTTTGTACCCGTCGAGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG ATGGAGGTTCCTAGTAAGCTCGTCGACGTTGAAGAAGAAGACGAAGTCGAGAAGAAACCGATCGCGATCGAAATCATCAAACAACTTGATATCTACAAATATGATCCGTGGGATCTTCCAAAAGTAAGCAATGTGGGAGAGAAAGAATGGTACTTCTTTTGCACTCGAGGGAGGAAGTATAGAAACAGTATAAGACCTAACAGGGTGACCGGGTCAGGGTTTTGGAAAGCAACGGGCATTGATAAACCGATTTTTTCGACACTCAAATCGAATCAAGAGTGCATTGGCCTTAAAAAATCTTTGGTTTACTATAGAGGAAGTGCTGCTTTTTGGAACGGCATCGATGGTGGAGGTGCGCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGGCGATATCTTCACTAGTGGAGGTTGGGACGAGTTGCAACTTGTTGTTCAGATGTCACCTTCGACCCTTTTCAATATTTAG MEVPSKLVDVEEEDEVEKKPIAIEIIKQLDIYKYDPWDLPKVSNVGEKEWYFFCTRGRKYRNSIRPNRVTGSGFWKATGIDKPIFSTLKSNQECIGLKKSLVYYRGSAAFWNGIDGGGARGGRDGGGGGGDIFTSGGWDELQLVVQMSPSTLFNI Homology
BLAST of Carg24721 vs. NCBI nr
Match: KAG7037501.1 (Transcription factor JUNGBRUNNEN 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318.2 bits (814), Expect = 4.0e-83 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Carg24721 vs. NCBI nr
Match: XP_022981711.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita maxima]) HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61 Identity = 144/268 (53.73%), Postives = 150/268 (55.97%), Query Frame = 0
BLAST of Carg24721 vs. NCBI nr
Match: XP_023523438.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.7 bits (605), Expect = 6.9e-59 Identity = 142/273 (52.01%), Postives = 147/273 (53.85%), Query Frame = 0
BLAST of Carg24721 vs. NCBI nr
Match: XP_022941189.1 (transcription factor JUNGBRUNNEN 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 200.7 bits (509), Expect = 9.4e-48 Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0
BLAST of Carg24721 vs. NCBI nr
Match: XP_022941190.1 (transcription factor JUNGBRUNNEN 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 200.7 bits (509), Expect = 9.4e-48 Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9SK55 (Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39 Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9ZVH0 (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.3e-35 Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q9FIW5 (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANAC094 PE=1 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.9e-33 Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26 Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25 Identity = 49/87 (56.32%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1IXB3 (transcription factor JUNGBRUNNEN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480775 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62 Identity = 144/268 (53.73%), Postives = 150/268 (55.97%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1FMK0 (transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446567 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.5e-48 Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A6J1FSV4 (transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446567 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.5e-48 Identity = 103/131 (78.63%), Postives = 104/131 (79.39%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A1S3CTC4 (transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504119 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41 Identity = 96/142 (67.61%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of Carg24721 vs. ExPASy TrEMBL
Match: A0A1S3CS33 (transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504119 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41 Identity = 96/142 (67.61%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of Carg24721 vs. TAIR 10
Match: AT2G43000.1 (NAC domain containing protein 42 ) HSP 1 Score: 164.1 bits (414), Expect = 9.1e-41 Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = 0
BLAST of Carg24721 vs. TAIR 10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 148.3 bits (373), Expect = 5.2e-36 Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of Carg24721 vs. TAIR 10
Match: AT5G39820.1 (NAC domain containing protein 94 ) HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34 Identity = 65/104 (62.50%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Carg24721 vs. TAIR 10
Match: AT3G12910.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32 Identity = 66/92 (71.74%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Carg24721 vs. TAIR 10
Match: AT2G02450.1 (NAC domain containing protein 35 ) HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25 Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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