Carg24619 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTACCTGGGCTTAGTGCCTGTCGAAGGTTGGATTATATTATTTGGAAGAAAATTTTTCCGGAAAAGAGGGCTAAGGACTACCTAGTAAATTTTAGTGAACATTTAAATGTAATCGTCTTTATTGTGGCAAAGGCTTGTCTGAATTGAGTCCCGACTTTTGATATCGTATTTATTTTCTGACTGATTATCTAGATTACAAATTTGTGTCGTTATCCAGGTATGGTGGAATTTATCTTGATTCTGATATTGTAGTCTTGAAACCTCTATCCTCGCTTCAAAATTCTGTTGGGATGGAGGATCAGCTTGCTGGAAGTTCTTTGAATGGGGCAATAATGGTATTTAGAAGGCACAGGTATGTGGCAGTTTAAAAGGCATCAGTTCTCTGGAAATTCATTTTGTGCTCACGAGTCGTCTATGTTATTATAACAGAATTAATTTTTCTTTTCTGAAAACATAATGGTTGATAACATCCTCACTAATCTACTGTGAATGAACACCTCCTCCAACATACAAAGAAGCTTGCATGACACAACAATATGCCCTCTCCCCTAAAGGAAGGATGCAAAAACACCTCCTCCAACATACAAAAAATGAAAAGATTGAGGGATCGGATCAAGTGTTTGGCACAGGACAAAATTGAAATTGATTTTCCTTAAAGAATTAATGTCTTCTAAGCTTACGGACTTTTGTGGGTTAAGAGATTGCTCCCACCATGTCTTCTAAGCTTTAAATGTTTTCACTCTTTATGCACCCCATTTATAGAAATTCATGTCATCTACGCTTATGAGCTATTAAGGTTTTAAAGCTTACTTCCACTATGTATATATATATATATACACATACGGAGGCCTTGATTAGTTTAGATTTTTTTTTAGTTATATCTTTGTCTCTTTTCTGCAGCCCCTTTATAATGGAGTGTTTGAAAGAATACTATTCGACTTATGATGATAGAAGTTTTAGATGGAATGGGGCCGAGCTCTTGACCAGAGTTGCAAAGAGGTTTTCCAAAGAAGTGCCTATAGAACAGTTTGAGCTTAATGTGCAGCCATCTTTTGTGTTCTTTCCCATTGCCTCACAGAATATCACTAGGTAATTTCTGATTTATTTTCTCGTTCATCTTATGCCTTATATATGTGTGTGTATTTGTTTTCATATGTATGTTTGTATGTATTTTATTATCATTCCTTTTCCAAAATAACCGCTCTACATTCCCCTCCACTTCCTAATAAGGCTCTCTAACTAACTGCTGACCCCTAGTTGTCCTTTTGACACTACTTGCATACCTATTTACAATTATAGTTTTTTTTTACCCTTCCTCACGTACGCATTTACAGTTGGAGGCTTAACAAAGTCTTCTCACTTGAGGGAATTAGAAAGCAGAACAGTCACAAAACAATCTGCACAAAGAGAGGCTACAAAGATAACAGATTCCAATATGACAGTCTAGAAATTCTCCTTCTCAAGGAAAATTCTCAGTTTCCAATCTAATGTCCTAAAAGATAGCCCGCAGCATTGAGCTCTGGAAGATGGAATTATGGAAACGGCTGTCTGATAAAAAAATGACTTCCACGTAGTTTCAGAGAGCACTTCTTTGGTTGAAAATTCCCCCTTCCCGTTTATATGAGTTCTCTCCTGCAGCTAATAAACATGTGGGGCCTGTCTATTCCCTGTCTTAAGCCTCGAAAAGAACCATCCTCTACTACAGACTTCATATGTCTGTTGGTTCTGTATATGTGGGTAGCCTTTAAAGAACTATGGTACAATTAAACTTCCATGTCACTGATCTCTGTACAAAGTCTTGTCTCCGCTTAATCAATCAATGATCAATGAAAAAAGAAAATGAAATTAGGTTCAAATAAGCAAATCTGTCACGGTAAAAGAAGGTTTGGGAGCACAAGATTTTGAGTGTTATGTATCTACCATTTCACCACCATGCCAAGACATTTTAATTATATCCCTGGTCGATGAATCTATTCTAGTTTCAACAAATTCTTAGAATTTTAGGTGGGATGGGCGTTGTAATTCTTTCTACTTTTCTGAGTATAATGATTGATTGTGAAGTGGGTTGGTGTTCTTCCTAATCTCCATCTCCTATGCGTCTCACCATGAAAACACGACAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTATATGGTATTACTTGCTGATTTGTGAGTTTAAGAGATCGGATGTCTCAAGTATGGCCTTTAAAACTTGCTGAGTTTTCCTGGTGCCTTTGAAGATAAGTAGAACAATCTAGGGAACGTCTGACTTAAGGGAAGGTCTCGTGAGTCGTAACTAAATATCAGCCTAGAAAATTGATTCAAGGGGATTCTACTGGAATTGGTTTTCCGGTAGCAGAATCAGAAGGTTAGAAGGCTCTTTTTAAGACATCAATTACTCCTGTTTCTTTTGCTCCATCTCACAGCGTTAATAGTCCCCTGACGCACATAATAATTCCAGTTCCGCCGAATCAGCATTCTCTGAGTTCTACAACATCTTTCCTGTCAATTTATCTTTTGCGGTTTTTTATTCCGTGAGAAGTCTTTTTGAAGGTTTACCCTTTCCCCAGACCACCTCCACTTATCACCTAATTATTTTCTTGAATACTTGACAATCCTTCTGCCATGCTTTGACAATTTTTTATTAGTTATGGAGACCGGTGTTAGACCCGCTGGTGTCATATGGTGATTAGAAAATTCAGAATTCCACCATGGATCAGCTCTTGCAGGAGGCACAAAATCGCATGAAGAAGTATTCTGATGGTAAGCGGAGGGAAGTTAACGTTGAGGGGACATTGGGGTTTCTTGAAGGTTAAGCCCTATCCGTTAGCCGAAAGGACAGCCGAAAGGACGAAATGAGAAGCTGACTCCAAAATTGTTTGGGTCTTACTGTGTTGAGGAACGTATTGGGCTAGTGACGTACCGTTTGAAATTTGCCTAAGGAAGCAATGTTTCATCTCGTCTTTCATGTGTCTCAACTAAAGAAAGCTGTGGGCCGTGACAATGAGATTCAAACGGGCCCTCCTATTCTCTCGGATACCTTCGGGGGCTGATGAGTTACTTGTGAGCTGGAAATTCTTTTCCTGAACATTGAGCTACCCGGATGAATGGTAAGGTACTGCTCTTACGTTATTCAATATACTTGGAAAAGGAGAGAAAAAAAGCACCAAAATACAAAAGCTCCCAGTCAAATCGAGAGGGCTGGTAATCTCTCCCCTGTTTCTTGAGAACTCTCTACAAAAATGCATAAAAGGCATGGCACTACCCACCCCATCAAAATATACAGAACAACTCTCCCTCACTCCAGTGCATTCTCTCTACTCTCCCTCACTCCAGTGCATTCTCTCTAAAGTAACTTGCACCCCCAATACCCTTCTTACCTTTAGTGTATACTGAATTTGGATCAGGGCCTAACATCACCCGTGGGTCACACGAATATTGTCTTCAAGGATGTAATCAGGCAGGGTGGAAGTTAGTTTAGAGCCCGGGTGGAAGTTCGTTTAGAGCGGATGCACTGGAGTGAGGGAGTGTAGTTTTTGATGGGGGTGGGTAGTGCCATGCTTTTTATGCATTTCTGTAGAGAGTTTTCAGGAAAAAGGGGAGAAATTTTACCAGCCCTCTCGATTTGGCTGGGAGCTTTTGTATTTGCCTTGGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTCCAAGTATATTGACTAACGTAAGAGCAATACCTTACCATTGGGTTATTCAAATACTTAACCACTCACATTTTTTAGGGATTTTTAGGATGGCTTTCTATATATATATTTACATTTTTTAGGGATTTTTAGGATGGCTTTCTAAATATATATTTACATTTCAAAATTATATTTCGAACACTTTTTTAACACTTAGGTCATTTCAAACAAGCAATAAGCTACTCTTTGTCTAAAAGTGTTCTAAAGTTTAATGCGGTTTATATTATTAATTCTTCTTTTTTGTGCAATCATCTATATTGGATTTAGATACTTTGCTGCACCAGCATCCACAATCGAAAAGGCTGAGCAAGAGGCTCTATTGAAGAAAATCTTGAAAGACTCGCTGACATTTCATTTTTGGAACAGCCTGACATATTCTCTCATTCCCGAGTCTGAGAGCCTTGTGAGCAGACTCCTCGAACATACTTGTATTAGATGTTTTGATGTATTGTGA ATGCAGTACCTGGGCTTAGTGCCTGTCGAAGATTACAAATTTGTGTCGTTATCCAGGTATGGTGGAATTTATCTTGATTCTGATATTGTAGTCTTGAAACCTCTATCCTCGCTTCAAAATTCTGTTGGGATGGAGGATCAGCTTGCTGGAAGTTCTTTGAATGGGGCAATAATGGTATTTAGAAGGCACAGCCCCTTTATAATGGAGTGTTTGAAAGAATACTATTCGACTTATGATGATAGAAGTTTTAGATGGAATGGGGCCGAGCTCTTGACCAGAGTTGCAAAGAGGTTTTCCAAAGAAGTGCCTATAGAACAGTTTGAGCTTAATGTGCAGCCATCTTTTGTGTTCTTTCCCATTGCCTCACAGAATATCACTAGATACTTTGCTGCACCAGCATCCACAATCGAAAAGGCTGAGCAAGAGGCTCTATTGAAGAAAATCTTGAAAGACTCGCTGACATTTCATTTTTGGAACAGCCTGACATATTCTCTCATTCCCGAGTCTGAGAGCCTTGTGAGCAGACTCCTCGAACATACTTGTATTAGATGTTTTGATGTATTGTGA ATGCAGTACCTGGGCTTAGTGCCTGTCGAAGATTACAAATTTGTGTCGTTATCCAGGTATGGTGGAATTTATCTTGATTCTGATATTGTAGTCTTGAAACCTCTATCCTCGCTTCAAAATTCTGTTGGGATGGAGGATCAGCTTGCTGGAAGTTCTTTGAATGGGGCAATAATGGTATTTAGAAGGCACAGCCCCTTTATAATGGAGTGTTTGAAAGAATACTATTCGACTTATGATGATAGAAGTTTTAGATGGAATGGGGCCGAGCTCTTGACCAGAGTTGCAAAGAGGTTTTCCAAAGAAGTGCCTATAGAACAGTTTGAGCTTAATGTGCAGCCATCTTTTGTGTTCTTTCCCATTGCCTCACAGAATATCACTAGATACTTTGCTGCACCAGCATCCACAATCGAAAAGGCTGAGCAAGAGGCTCTATTGAAGAAAATCTTGAAAGACTCGCTGACATTTCATTTTTGGAACAGCCTGACATATTCTCTCATTCCCGAGTCTGAGAGCCTTGTGAGCAGACTCCTCGAACATACTTGTATTAGATGTTTTGATGTATTGTGA MQYLGLVPVEDYKFVSLSRYGGIYLDSDIVVLKPLSSLQNSVGMEDQLAGSSLNGAIMVFRRHSPFIMECLKEYYSTYDDRSFRWNGAELLTRVAKRFSKEVPIEQFELNVQPSFVFFPIASQNITRYFAAPASTIEKAEQEALLKKILKDSLTFHFWNSLTYSLIPESESLVSRLLEHTCIRCFDVL Homology
BLAST of Carg24619 vs. NCBI nr
Match: KAG7034815.1 (hypothetical protein SDJN02_04547, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of Carg24619 vs. NCBI nr
Match: XP_022926069.1 (uncharacterized protein At4g19900 isoform X1 [Cucurbita moschata]) HSP 1 Score: 340.9 bits (873), Expect = 7.1e-90 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Carg24619 vs. NCBI nr
Match: XP_023544711.1 (uncharacterized protein At4g19900 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 339.0 bits (868), Expect = 2.7e-89 Identity = 169/172 (98.26%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of Carg24619 vs. NCBI nr
Match: XP_022977449.1 (uncharacterized protein At4g19900 isoform X1 [Cucurbita maxima]) HSP 1 Score: 334.7 bits (857), Expect = 5.1e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg24619 vs. NCBI nr
Match: KAG6581522.1 (hypothetical protein SDJN03_21524, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy Swiss-Prot
Match: P0C8Q4 (Uncharacterized protein At4g19900 OS=Arabidopsis thaliana OX=3702 GN=At4g19900 PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.3e-59 Identity = 111/178 (62.36%), Postives = 140/178 (78.65%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy Swiss-Prot
Match: Q67BJ4 (Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus OX=10090 GN=A4galt PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 8.6e-14 Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy Swiss-Prot
Match: Q9JI93 (Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus OX=10116 GN=A4galt PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13 Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy Swiss-Prot
Match: Q9N289 (Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo pygmaeus OX=9600 GN=A4GALT PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11 Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy Swiss-Prot
Match: Q9NPC4 (Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens OX=9606 GN=A4GALT PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11 Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy TrEMBL
Match: A0A6J1EDZ7 (uncharacterized protein At4g19900 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433297 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.4e-90 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy TrEMBL
Match: A0A6J1IRE4 (uncharacterized protein At4g19900 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477792 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.4e-88 Identity = 166/172 (96.51%), Postives = 169/172 (98.26%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy TrEMBL
Match: A0A1S3AZG3 (uncharacterized protein At4g19900 OS=Cucumis melo OX=3656 GN=LOC103484255 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81 Identity = 151/176 (85.80%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy TrEMBL
Match: A0A6J1CYG6 (uncharacterized protein At4g19900 OS=Momordica charantia OX=3673 GN=LOC111015750 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.5e-80 Identity = 150/176 (85.23%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Carg24619 vs. ExPASy TrEMBL
Match: A0A6J1IJY3 (uncharacterized protein At4g19900 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477792 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79 Identity = 154/172 (89.53%), Postives = 156/172 (90.70%), Query Frame = 0
BLAST of Carg24619 vs. TAIR 10
Match: AT4G19900.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 229.9 bits (585), Expect = 1.6e-60 Identity = 111/178 (62.36%), Postives = 140/178 (78.65%), Query Frame = 0
BLAST of Carg24619 vs. TAIR 10
Match: AT1G61050.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 97.8 bits (242), Expect = 9.7e-21 Identity = 59/193 (30.57%), Postives = 100/193 (51.81%), Query Frame = 0
BLAST of Carg24619 vs. TAIR 10
Match: AT2G38152.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 0
BLAST of Carg24619 vs. TAIR 10
Match: AT2G38150.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19 Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 0
BLAST of Carg24619 vs. TAIR 10
Match: AT3G09020.1 (alpha 1,4-glycosyltransferase family protein ) HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16 Identity = 44/176 (25.00%), Postives = 90/176 (51.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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