Carg24605 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGTTAGATAAATAAACACGATAGAGAAAAGAGAGCGATACTCAATTTCGGCGAATCGGCGGTATGGGAAGAAATATCATCTCTCACTGGCGTCTACTCCGGCGAGCTCTCGACCACGGCCGATGGCTAGGTCCATGTTATCGCAATTATTCTATTTTCAGTCGCTCTGAAATACTTCTTGGAAGTTCGTCATCATCATCTTCGTTTTCAGCCGCTCCCTCCCATCGCAGTGCGCCGGACTTTCAGTCCCCCAGCCTACCTTTTCGGCACTGTCGACCTCTATGCTCAGCGTCAGGTTTTGCCTTTCACGTCCCCCCTCCTTCATCTTCAGCCAAAATCTGGCCCTGCGATTGTTTGTTACTGCTGGATTCTTATGAGTGTCGTGTTTATTGCGTTTATCTTCTTTGTATATGTGCTGTTTGCAAGGGTCGGTTTGAAAATTTGAAGCTTGTGCTGAGAACTTAAATAACAGACATTTAAAACGAGTTCTTAGCATTTCTATTTGTGCTCTTTGGATCTCATGGTTCACTGCTCAATAAACGAGCCAAATGATGCAGGTCTTTCTTGATTAAATCACTGTAAATCTTTCTTATTCTTTGGTATTTCCTGCGTACTGACTTGTTTCTGGTATGGGTAAATTGCAAAAGTACATTTTTTCTCGAATAAATCTCGAGAAACCGTTGTGTTTTGTTTTGTCGTTTCGTTTTTAGCACAATAATTTACAGCAGTTTTCGCTCTGTTGCTGTATGCTCATATCGTTTTTCCTTCCTTTGGAGTTTGGGATTTGAGTACTGCTATTTTTTTCTCTACGGTTTGAACGAAATTAAGTGATGATTTAAACATGATTTCAGATCCTTCGAATATTATCATGATAAAGTCTGAAGATCAATTCAAGAAGTCACTTGGGAAAGCACAAGGTATACCCTTTTAGCAAATCATTTTGGCAAATAAATTTCTTCCTTTGCCTTTTCAGCTGCTTAATACCGCTGGATCTTTTTTTTCCTTGCCAAAAACTCATTGTAGATGAAGCTTTGCCGGCAATTTTCTACTTCACAGCTGCCTGGTGTGGTCCTTGTGAGTTCCAAAACAGTTTTACATACGGTCGATTCAATTAGTTGACTTTTTTTCTATGCATAAACATGTGCACATCATATAGTTTTCCTGGAGTTTTTGCTAGATGTTTGATGTATTGTATGGACTCTCAATTTGTTTTATTGCTATATCTGCAGGCAGATTGTTATCCCCTGTAATCAAAGAATTGAGTAAGAACCATCCTCAGGTGACAACATATAAAATCGACATTGATCAGGTAGGTAGTCAATGTTGATAGCTTTCTTAAGGCATTATATCAGTGAAAAAAACAGAGGTTGAAGTCTCCACCCAACCACACACACATATTTTTTAACTTTAAAAAGACAAAGAAAAAGGATCAGCTTTCCTCAAACTGTGCAACATTCATTGGAATCATTGCCCAACCGATTGTCAACGACGGACTTGTTTGTAATACTTCCTACATGTTTTAAGTTCAATAATCTTGTGGAATATGATCCAGCTGATTGTTGACTGTGACGGCCTTGAGAAAGGGATTAGGTTAGCAATAACCTTCAAATTTCACAAAAGGGAAAGTCTTTGCTTTGGTCCTTATTGCATGGGAACGTCAAAGACTTGTCCAGTTTCAGGGAAGAACTCCATTGTAACCGTATCTGTCAATGGTGCAGTATGTGGAACAAGGAAGTCAGGATAACTAGCACCTTCTTTATTGTAAACTTTTGAAAGGAATTAGGAGTGAGGTTTTGATTGATTTAATTGGGGAACAATTTTGAGTTTATGCAATGCTGGTTAGGTCAAGGCTTGGAGAGCAATTGAAAACTTTTGTCAATCATTGCATGCTGCAGATCAGTGTGGATGATTCGGTTGGAGAGAAAGAGGAGGTTTCTGAGGATCCATATTGGTAGTTTTAGTTAGAAAGAACACCATTTCTTTCTAGCTTCTAGATTAAGTTCCTAATCAGGTTGTGCGTGTGTGTGTTTTATTACTATTTCTATTATTTAATTAAAAAAATATAAATATAAATATATGTATTTTAAAATTCTAAAGGATTCTTCTCTTTTTCCATGTTGCATTCTGATTGTATGCGTTTTGCTAATCTCCATTGGTTAGGGTGCGGGAAGATTTCTTCTCTCTTCTATATTTTCTATTATTTTATTCGTGTCCAAAAGAAGAAGCTTATTTTAGAGTACTTTATGCCTGGGAAAATTATTGAATCTGTTGCATACTTCTTTTCGCGCAGTCCTTTCTTAATATTCTTTGACGATTTGGTATACTATGCCTTTATCATCTCATGCACTCAAAATGGGTCATAATGAAATTGTTATGCCTTTTACAGGAGGGACTCGAAAGAACTTTGAGTGACTTAAATATTACCTCTGTGGTAAGAGTCTCAGCTCTTGTAATTTCCTACAGCCTTGTAATAAATTTTATGAATAGCTCGAGAGCTCAATCTTTTTTATTTTCGTGCCTAATTTCAGCAGTACTATTTGATGTTTTCTGATTGCATTTTGCAATTTGATCTGCCTGTGTATTTCTAATATTACTAGAAGCTTTAATCTAGAGAGGACAAACCAATCGAATTAACTTTTTTTTTTTTTTAAAAAGGTAAATAACTTTGTTTCTGCCTAGACTTGCATCAGTCAATTATAATGGATGGTGACTAGATATTTTTGCTCCACTTAAAACTGTTGGATGACATTTTGCCTTTGCTTTGGTAGTTTGGTTTATCATGATTTGTCTTCTTGGTTTCGTTCCACTTTGTTTATCAATGAAAATGAGAGGGGGGATTGGGAAAAACCTACTGGTGCTGTCATATATAAGTCATATCTGAGCCTTTTGGTTTGTCTTCATGTTTCTGAAATGTTCTTTTTGAGTTTTTAGAATATTCCCAATAGCAAATTTTTACAATCTCATGTGATTATGCCGTGTCTTGTGTATGATGTTTGAATGTCCAGTAATTCTGAGTTTAGGTTATTTTTATGCAGGTTCCATTATGAATGCGGTTTTATATTAAATTTTAAAAGGCTCTAGCTCAAACAACCTTAAAAACTTGTCGGAATTTAATTGATGCAATGATATCTACTATTCTCATATGCTTATTGTTGTGTTGGGTAACAGCCAACACTTCATTTCTTTCAGAGTGGCAAAAAGGCAGGGGAGATTATCGGTGCTGATGTTGCAGGCATAAAAAATATCATGGAGAAGCTTTACAAATGACCTCCTCACGCATCATTTTGGTTCATCTCTTTTCAAGCAGGTTTACCATTTAACACGTTGATTCTCGAGCCATGCCTGCTTATCTAGTTTTAATAAAGAAATTTGATACCCATCACTGTAATGAATGTAATGTTGTTGTAACCAGATCGATGTGTCGGATCATGTGACGATTGGCAGATGGGAATCATCCTTATACGGAATTTGCCTTTAGTAGCACACCACAAACAAATATGGTATGAGGAGTATTTGAACCTCTGACTTGAACTTGAAGGAAAGGAATATTTTTGAATTTGTAGTTATTTAAAGTACATTTAAGAGCCAATAATTGAGGTGCCAACTTAGGGCTGTTGAGTGTTTGTGTTTGTAGATTTAAAATTTATTTTTAAAAAGGAAAAACTATTTATTTTCATTTTTCACTACTCTGTATGCAATTTCAATGATTAAATGAGGAATAAATTTGATTGATAAAACCCCCAAGACTGTGATTCTTTATTACCAAACATGCCTTCCCATTTAACTTGTAAAAGGGAATCCTTTTCAAAATTACAATTATTTATGCTTCATAAT TTTTGTTAGATAAATAAACACGATAGAGAAAAGAGAGCGATACTCAATTTCGGCGAATCGGCGGTATGGGAAGAAATATCATCTCTCACTGGCGTCTACTCCGGCGAGCTCTCGACCACGGCCGATGGCTAGGTCCATGTTATCGCAATTATTCTATTTTCAGTCGCTCTGAAATACTTCTTGGAAGTTCGTCATCATCATCTTCGTTTTCAGCCGCTCCCTCCCATCGCAGTGCGCCGGACTTTCAGTCCCCCAGCCTACCTTTTCGGCACTGTCGACCTCTATGCTCAGCGTCAGATCCTTCGAATATTATCATGATAAAGTCTGAAGATCAATTCAAGAAGTCACTTGGGAAAGCACAAGATGAAGCTTTGCCGGCAATTTTCTACTTCACAGCTGCCTGGTGTGGCAGATTGTTATCCCCTGTAATCAAAGAATTGAGTAAGAACCATCCTCAGGTGACAACATATAAAATCGACATTGATCAGAAGAAGCTTATTTTAGAGTACTTTATGCCTGGGAAAATTATTGAATCTGTTGCATACTTCTTTTCGCGCAGTCCTTTCTTAATATTCTTTGACGATTTGGAGGGACTCGAAAGAACTTTGAGTGACTTAAATATTACCTCTGTGCCAACACTTCATTTCTTTCAGAGTGGCAAAAAGGCAGGGGAGATTATCGGTGCTGATGTTGCAGGCATAAAAAATATCATGGAGAAGCTTTACAAATGACCTCCTCACGCATCATTTTGGTTCATCTCTTTTCAAGCAGGTTTACCATTTAACACGTTGATTCTCGAGCCATGCCTGCTTATCTAGTTTTAATAAAGAAATTTGATACCCATCACTGTAATGAATGTAATGTTGTTGTAACCAGATCGATGTGTCGGATCATGTGACGATTGGCAGATGGGAATCATCCTTATACGGAATTTGCCTTTAGTAGCACACCACAAACAAATATGGTATGAGGAGTATTTGAACCTCTGACTTGAACTTGAAGGAAAGGAATATTTTTGAATTTGTAGTTATTTAAAGTACATTTAAGAGCCAATAATTGAGGTGCCAACTTAGGGCTGTTGAGTGTTTGTGTTTGTAGATTTAAAATTTATTTTTAAAAAGGAAAAACTATTTATTTTCATTTTTCACTACTCTGTATGCAATTTCAATGATTAAATGAGGAATAAATTTGATTGATAAAACCCCCAAGACTGTGATTCTTTATTACCAAACATGCCTTCCCATTTAACTTGTAAAAGGGAATCCTTTTCAAAATTACAATTATTTATGCTTCATAAT ATGGGAAGAAATATCATCTCTCACTGGCGTCTACTCCGGCGAGCTCTCGACCACGGCCGATGGCTAGGTCCATGTTATCGCAATTATTCTATTTTCAGTCGCTCTGAAATACTTCTTGGAAGTTCGTCATCATCATCTTCGTTTTCAGCCGCTCCCTCCCATCGCAGTGCGCCGGACTTTCAGTCCCCCAGCCTACCTTTTCGGCACTGTCGACCTCTATGCTCAGCGTCAGATCCTTCGAATATTATCATGATAAAGTCTGAAGATCAATTCAAGAAGTCACTTGGGAAAGCACAAGATGAAGCTTTGCCGGCAATTTTCTACTTCACAGCTGCCTGGTGTGGCAGATTGTTATCCCCTGTAATCAAAGAATTGAGTAAGAACCATCCTCAGGTGACAACATATAAAATCGACATTGATCAGAAGAAGCTTATTTTAGAGTACTTTATGCCTGGGAAAATTATTGAATCTGTTGCATACTTCTTTTCGCGCAGTCCTTTCTTAATATTCTTTGACGATTTGGAGGGACTCGAAAGAACTTTGAGTGACTTAAATATTACCTCTGTGCCAACACTTCATTTCTTTCAGAGTGGCAAAAAGGCAGGGGAGATTATCGGTGCTGATGTTGCAGGCATAAAAAATATCATGGAGAAGCTTTACAAATGA MGRNIISHWRLLRRALDHGRWLGPCYRNYSIFSRSEILLGSSSSSSSFSAAPSHRSAPDFQSPSLPFRHCRPLCSASDPSNIIMIKSEDQFKKSLGKAQDEALPAIFYFTAAWCGRLLSPVIKELSKNHPQVTTYKIDIDQKKLILEYFMPGKIIESVAYFFSRSPFLIFFDDLEGLERTLSDLNITSVPTLHFFQSGKKAGEIIGADVAGIKNIMEKLYK Homology
BLAST of Carg24605 vs. NCBI nr
Match: KAG7034803.1 (Thioredoxin O1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448.0 bits (1151), Expect = 4.8e-122 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg24605 vs. NCBI nr
Match: XP_022926066.1 (thioredoxin O1, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022926067.1 thioredoxin O1, mitochondrial-like isoform X1 [Cucurbita moschata] >KAG6581512.1 Thioredoxin O1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 361.3 bits (926), Expect = 5.9e-96 Identity = 188/223 (84.30%), Postives = 188/223 (84.30%), Query Frame = 0
BLAST of Carg24605 vs. NCBI nr
Match: XP_023545000.1 (thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 349.7 bits (896), Expect = 1.8e-92 Identity = 183/223 (82.06%), Postives = 186/223 (83.41%), Query Frame = 0
BLAST of Carg24605 vs. NCBI nr
Match: XP_022978794.1 (thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_022978795.1 thioredoxin O2, mitochondrial-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 341.7 bits (875), Expect = 4.9e-90 Identity = 179/223 (80.27%), Postives = 183/223 (82.06%), Query Frame = 0
BLAST of Carg24605 vs. NCBI nr
Match: XP_022926068.1 (thioredoxin O2, mitochondrial-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 338.2 bits (866), Expect = 5.4e-89 Identity = 181/223 (81.17%), Postives = 181/223 (81.17%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy Swiss-Prot
Match: O64764 (Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g35010 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.9e-34 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy Swiss-Prot
Match: Q93VQ9 (Thioredoxin O2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g31020 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy Swiss-Prot
Match: Q655X0 (Thioredoxin O, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0665900 PE=2 SV=2) HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20 Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy Swiss-Prot
Match: Q6ES52 (TPR repeat-containing thioredoxin TDX OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0401200 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09 Identity = 42/151 (27.81%), Postives = 68/151 (45.03%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.5e-06 Identity = 25/85 (29.41%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy TrEMBL
Match: A0A6J1EDE2 (thioredoxin O1, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433296 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96 Identity = 188/223 (84.30%), Postives = 188/223 (84.30%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy TrEMBL
Match: A0A6J1IR89 (thioredoxin O2, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478653 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90 Identity = 179/223 (80.27%), Postives = 183/223 (82.06%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy TrEMBL
Match: A0A6J1EH02 (thioredoxin O2, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433296 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.6e-89 Identity = 181/223 (81.17%), Postives = 181/223 (81.17%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy TrEMBL
Match: A0A6J1IP12 (thioredoxin O2, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478653 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83 Identity = 172/223 (77.13%), Postives = 176/223 (78.92%), Query Frame = 0
BLAST of Carg24605 vs. ExPASy TrEMBL
Match: A0A6J1CZ91 (thioredoxin O2, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111015843 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66 Identity = 140/225 (62.22%), Postives = 162/225 (72.00%), Query Frame = 0
BLAST of Carg24605 vs. TAIR 10
Match: AT2G35010.1 (thioredoxin O1 ) HSP 1 Score: 146.4 bits (368), Expect = 2.8e-35 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of Carg24605 vs. TAIR 10
Match: AT2G35010.2 (thioredoxin O1 ) HSP 1 Score: 146.4 bits (368), Expect = 2.8e-35 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of Carg24605 vs. TAIR 10
Match: AT1G31020.1 (thioredoxin O2 ) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28 Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0
BLAST of Carg24605 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 20/70 (28.57%), Postives = 36/70 (51.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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