Carg24562 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24562
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic
Location	Carg_Chr11: 33028 .. 37570 (+)
RNA-Seq Expression	Carg24562
Synteny	Carg24562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAGAGAGGCTCCTCCTCTCATCTTCTCCTCCGTCTTGCCTTCCCACCGAACACCCTATCTATCAGCTTCAGCTTCAGCTTCAGCTTCAAGTTCTTCAAGGTCTCTCTCTCCACCCTATCTTTCATTTTACTTCTGATTCTTTTCTTTTCTTCTTTTACCTTATCCTCACTATCTATCTATCTATCTCTTCCTTTATTTCAATTATGTTCTTCTTCGTTTCTACTCAACTCAATTCACTGTTCTTCGAAACCGGACTTAGATTCCCCGCCAGGATATGCCCTCCCCTACAACCTATGACAACAAGATTCAGAAGCCCTAATTGATAAAACTATACTGTTTTTTTTTCTTTTTTTTTTTCTTTAAATACTTGTTAAGATTTTCTCCACTTTGTTTAATATTGCGTTTTGACAGACTTTCCTTAAGCGTTTTTTCGTTAATACCTTATTTTCGTGCTACCACTATCTGGCTAGCAGCACTTCTTTGAGGAGACCCTCCATTAACATCTTCCTCTTTAAACGCTAGCAGTCGGTGGACATCATGGCTAGAGTTCTTGTTCAGTCCACAAATATTCCTGGTCTGGTCGGTGGAAGGAAGACTGGCCTATCAAGAGGATCAGTAAATGTAAAACGGGCTGTTAGAATGATGGCCAGCGTTCATGCACCTGGTTCGAGAATAAGAAGTTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTAGACAGGATTTTCATTCCAAGGTGGCCATTACAATCTCTTCTAGGCGACGAAAGGCTACCAGATGTGTCCCAAGAGCCATGTTTGAGCGATTCACAGAAAAGGCAATTAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGACTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGTACTGGTATCGCTGCCAAGGTTCTTAAATCCATGGGAATTAATCTTAAAGACGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGCGGGTTTGTTGCTGTAGAAATTCCCTTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGGTAACATTTCTTTCCCATCCCCCACTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGGAACAAAACAGAACAGTAAAATCAAATTAATTTCTCTCTGTATAGTTATCAATTTCAATTTTCTTAGTATTTTTTCCTTTTATTATGCATGTTTGTATGTTCTTTTTTCATTTAACTTGAACTTCACCCTCAAGGGCAGCTTTGTGGTAAGGAAGAACTTGAGGCTTTCGTGGGAATTTGAGTCAAGATCATGGGTTCAAGTCAGAGTCGTTGTTGTCTGCTGGAACTAATGTTGGTGCACACATAGTCTCTCCATGGAGTTGTAGGATGTAGCTCGTGTTTATATAAGCTTTATTGGAAGCATGTTATTGATAAAAGTATTCAGTTTTTCTTTCAACGTGAAAAATTTACAAATTCTACTCTTTTCTATTTTTGTTTTGAACTGGAAGATTTTTCATTGGATCGTAGCCAATAGCTAGAAGGGATGTCCGTGTGTGCTTGTGTGTATGGATATGTATGCCTATAGATATATAGATCCATGTTCCATTAGATGGGTCCTGCGTTATATATGTTGTTTGACTTCTAACCGTTGTATTGACTACTAAACCTGCATGAACCTTATTTTGCTGCATTTTCAGGTCACAATTATATTGGATCAGAGCACTTGCTTCTGGGTCTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTGGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGAATTTCATCCCGACACTATACATTTATTTTATTTTATTTTTAACTTAATATTTTATAAATTGAGTGAACAGGTAATTCGAATGGTTGGTGAGAGCACAGAGGCTGTTGGTGCTGGTGTTGGAGGAGGGAGCAGTGGGAACAAGATGCCAACTCTGGAAGAGTACGGCACAAACTTAACTAAGCTGGCTGAAGAGGTGCTCTTGAAATATATTTCCGGTGACTTATGATATGATAAGGAGTTGTTTGTTGTGTAGAAACATGGGTTCTAGATTCTAATGTCAGTTTCTTGCCTCTCCAGGGTAAACTGGATCCTGTTGTTGGAAGGCAGCAGCAAATTGAACGTGTAACACAAATTTTGGGCCGGCGAACAAAAAATAATCCTTGCCTCATTGGTGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGCCTGGCACAAAGGATTGCTAATGGGGATGTTCCTGAAACAATCGAAGGAAAGAAGGTTAGAATATTTCCCACAACAACTAGTTCCTTTCTAAAGAGTTTAAGAAAATACCTTCTTGTTGTGTATTAAAGAATCAATTGCTCGTGTCTTCATCACTAAAGCAGTGAATTTTGTGGTTTGCAACCGGGTCTGCTTCTCTTGGAAATTTGGAAAGAAGGAACTTTAAAATCTTGATATTACGGCCAGAGAACGGGTGAAGTGTGGTATTTGATTCATTCTGTGAGCTCCCCTTGGCGTATTATTGCCTCTTCTCGTGTAGTGTATTTTTTAAAGTTGAACCTAACTGGAGCACCTTTAATGAGCCCCTTCAGTTTCCCTATCCTTTTGTACTTTTCACGTTTTTAACTGAATGTATCTTTTCTTTTCCTTTTAAAAAAATGAAAACATGGAAGTGGAAAATTAATATATATATATATATTAATTTTTTTAAGAATATAATATAATACTTCTGGAATGAAAAAAAATGAAAAAAATGGAACTGTAGTACTTCTGGAATGACTTCTTTTTTCTTTTAATATAATATATATTTTTTATGTGTTTATTATTAGTCCATCCTTACTCTGGGTTTCACATTTTCAGCATGTGGTTTCTTCTGAATTGCATTAGCTTTCAACCTTTTAAGAAATTATGCCAGATTTATTTAAGTATTGTGCAATTATATTCATCATATTATAACGGTAATTAAGCTTTACACTTCTTTTTGTTATTTTACTCGTACCGGAGGCTCTGTAGGCCATTTTTATGGCTTCACTTAAATTAAAATTGTCTTTAGTTCTATAAGTTAGCAAGCTCTAACAAATGTTCCTTGAGATAAATCATGAGATTGCTGGACGTATTGAATTGTGTTTGTTAAACCTGGTCTGAACATTTATTTGAACTAGAAAACTATTTTCCTTCATTATTTTGAAAATAACTTGTTATTGAAGTATGTATTAAATTCTTTCTGTGATGTAGGTCATAACCCTGGATATGGGACTTCTCGTAGCTGGCACAAAATATCGTGGAGAGTTTGAGGAAAGATTAAAGAAACTTATGGAGGAAATTAAACAAAGTGATGAGATTATCCTTTTCATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATCGATGCGGCAAATATATTGAAACCTGCCCTTGCAAGAGGTGAACTGCAGGTGGTAATCTTGGGCATCTCATTAGGATAGTATGATTTTGATCTTTTTTTTTTTTAATATTAAAAAAATTGTGATAAGTGACCCAAGTAAAAAAAGCCAAAACATCTTAGAGGCTGGGAAACTAAGCTATTGCCTGAAGACTTTCCATTCTAGGTTAATATTAGAACTGTATAATTACCAAACCATTATTTTTGAAGGGCACTCCAAAATGAGATTGTGTAATGAACAATATCACAACTTTCACGGTGAAAATTTTCTGGTTTTTTACCAACCATATGTGAGCCACAAGAAAAGCTCTGATTTTTCTTTGGTGAAGAGCCTGACTTCGATTTTCTTTGGGAGACTAACTTTATTTGGCCCTCAACTGCTGCAAACTAGATGCACAAGGAGGAGATTCAGTTTCTAAGGAATCAGTAGGGAGCTTCAAAAGTGCCTATTTAAGAATCTAAGAACTGGACCTGTCAAGTGTATATGTCACCGTTTCTTTGTTAGAACCAAGACTAGCGTCCTTGATCTTGTCTCTACTTTTATATGCTAAATTTTATTTTGGGCAGATTCTAGGATTTCGTTTAACAAAAAGATATCCATTACGACAAAATGTAATATAGTTGCAAAATATAGGATTATACATACTTATGTATTTGAGATTTTTTTTTTTTTTTTTTTTTTCACCTTACCGGCTAGTAGTTTTCAATCATTTGTTAAAATGTGTCTTTTGGAGTTGGACCTTATATTTCTTGACTCCCAGTATTATCTAATTAGCTGGTTCTCTATTTTTACAGTGCATTGGAGCCACAACATTGGATGAATACAGGAAGCACATTGAGAAAGATCCGGCCTTAGAAAGGAGATTTCAGCCCGTCAAAGTGCCGGAACCGTCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGAGAGCGCTATGAAATCCACCACAAACTTCGATACACGGATGAAGCATTAGTAGCTGCTGCACAACTGTCATACCAGTACATCAGGTATGTTACTATTGAGTGA

mRNA sequence

AATAAGAGAGGCTCCTCCTCTCATCTTCTCCTCCGTCTTGCCTTCCCACCGAACACCCTATCTATCAGCTTCAGCTTCAGCTTCAGCTTCAAGTTCTTCAAGTCGGTGGACATCATGGCTAGAGTTCTTGTTCAGTCCACAAATATTCCTGGTCTGGTCGGTGGAAGGAAGACTGGCCTATCAAGAGGATCAGTAAATGTAAAACGGGCTGTTAGAATGATGGCCAGCGTTCATGCACCTGGTTCGAGAATAAGAAGTTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTAGACAGGATTTTCATTCCAAGGTGGCCATTACAATCTCTTCTAGGCGACGAAAGGCTACCAGATGTGTCCCAAGAGCCATGTTTGAGCGATTCACAGAAAAGGCAATTAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGACTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGTACTGGTATCGCTGCCAAGGTTCTTAAATCCATGGGAATTAATCTTAAAGACGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGCGGGTTTGTTGCTGTAGAAATTCCCTTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGATCATGGGTTCAAGTCAGAGTCGTTGTTGTCTGCTGGAACTAATGTCACAATTATATTGGATCAGAGCACTTGCTTCTGGGTCTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTGGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGAATTTCATCCCGACACTATACATTTATTTTATTTTATTTTTAACTTAATATTTTATAAATTGAGTGAACAGGTAATTCGAATGGTTGGTGAGAGCACAGAGGCTGTTGGTGCTGGTGTTGGAGGAGGGAGCAGTGGGAACAAGATGCCAACTCTGGAAGAGTACGGCACAAACTTAACTAAGCTGGCTGAAGAGGGTAAACTGGATCCTGTTGTTGGAAGGCAGCAGCAAATTGAACGTGTAACACAAATTTTGGGCCGGCGAACAAAAAATAATCCTTGCCTCATTGGTGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGCCTGGCACAAAGGATTGCTAATGGGGATGTTCCTGAAACAATCGAAGGAAAGAAGGTCATAACCCTGGATATGGGACTTCTCGTAGCTGGCACAAAATATCGTGGAGAGTTTGAGGAAAGATTAAAGAAACTTATGGAGGAAATTAAACAAAGTGATGAGATTATCCTTTTCATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATCGATGCGGCAAATATATTGAAACCTGCCCTTGCAAGAGGTGAACTGCAGGTGTGCATTGGAGCCACAACATTGGATGAATACAGGAAGCACATTGAGAAAGATCCGGCCTTAGAAAGGAGATTTCAGCCCGTCAAAGTGCCGGAACCGTCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGAGAGCGCTATGAAATCCACCACAAACTTCGATACACGGATGAAGCATTAGTAGCTGCTGCACAACTGTCATACCAGTACATCAGGTATGTTACTATTGAGTGA

Coding sequence (CDS)

AATAAGAGAGGCTCCTCCTCTCATCTTCTCCTCCGTCTTGCCTTCCCACCGAACACCCTATCTATCAGCTTCAGCTTCAGCTTCAGCTTCAAGTTCTTCAAGTCGGTGGACATCATGGCTAGAGTTCTTGTTCAGTCCACAAATATTCCTGGTCTGGTCGGTGGAAGGAAGACTGGCCTATCAAGAGGATCAGTAAATGTAAAACGGGCTGTTAGAATGATGGCCAGCGTTCATGCACCTGGTTCGAGAATAAGAAGTTTCTCTGGACTTAGAGGATTTAATTCTTTGGATAACATGTTGAGAACTAGACAGGATTTTCATTCCAAGGTGGCCATTACAATCTCTTCTAGGCGACGAAAGGCTACCAGATGTGTCCCAAGAGCCATGTTTGAGCGATTCACAGAAAAGGCAATTAAAGTTATCATGCTTGCCCAGGAGGAAGCGAGGCGACTTGGTCACAATTTTGTTGGCACAGAGCAGATACTTTTAGGTCTTATTGGCGAAGGTACTGGTATCGCTGCCAAGGTTCTTAAATCCATGGGAATTAATCTTAAAGACGCGCGCGTGGAGGTGGAGAAGATAATTGGTCGGGGCAGCGGGTTTGTTGCTGTAGAAATTCCCTTCACTCCTCGTGCAAAGCGTGTTTTGGAACTTTCTCTCGAGGAAGCTCGCCAACTTGATCATGGGTTCAAGTCAGAGTCGTTGTTGTCTGCTGGAACTAATGTCACAATTATATTGGATCAGAGCACTTGCTTCTGGGTCTACTTCGTGAAGGTGAGGGTGTTGCAGCTCGTGTTCTTGAAAACTTGGGTGCTGATCCTAGTAACATTCGCACTCAGGCAAGAATTTCATCCCGACACTATACATTTATTTTATTTTATTTTTAACTTAATATTTTATAAATTGAGTGAACAGGTAATTCGAATGGTTGGTGAGAGCACAGAGGCTGTTGGTGCTGGTGTTGGAGGAGGGAGCAGTGGGAACAAGATGCCAACTCTGGAAGAGTACGGCACAAACTTAACTAAGCTGGCTGAAGAGGGTAAACTGGATCCTGTTGTTGGAAGGCAGCAGCAAATTGAACGTGTAACACAAATTTTGGGCCGGCGAACAAAAAATAATCCTTGCCTCATTGGTGAGCCTGGTGTTGGGAAAACTGCTATTGCAGAAGGCCTGGCACAAAGGATTGCTAATGGGGATGTTCCTGAAACAATCGAAGGAAAGAAGGTCATAACCCTGGATATGGGACTTCTCGTAGCTGGCACAAAATATCGTGGAGAGTTTGAGGAAAGATTAAAGAAACTTATGGAGGAAATTAAACAAAGTGATGAGATTATCCTTTTCATTGATGAGGTGCACACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATCGATGCGGCAAATATATTGAAACCTGCCCTTGCAAGAGGTGAACTGCAGGTGTGCATTGGAGCCACAACATTGGATGAATACAGGAAGCACATTGAGAAAGATCCGGCCTTAGAAAGGAGATTTCAGCCCGTCAAAGTGCCGGAACCGTCTGTGGATGAAACCATACAGATTTTGAAAGGCCTTAGAGAGCGCTATGAAATCCACCACAAACTTCGATACACGGATGAAGCATTAGTAGCTGCTGCACAACTGTCATACCAGTACATCAGGTATGTTACTATTGAGTGA

Protein sequence

NKRGSSSHLLLRLAFPPNTLSISFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIRYVTIE

Homology

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BLAST of Carg24562 vs. NCBI nr
Match: KAG7021370.1 (hypothetical protein SDJN02_15095, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1069.3 bits (2764), Expect = 1.1e-308
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0


Query: 1   NKRGSSSHLLLRLAFPPNTLSISFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGL 60
           NKRGSSSHLLLRLAFPPNTLSISFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGL
Sbjct: 1   NKRGSSSHLLLRLAFPPNTLSISFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGL 60

Query: 61  SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRK 120
           SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRK
Sbjct: 61  SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRK 120

Query: 121 ATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSM 180
           ATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSM
Sbjct: 121 ATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSM 180

Query: 181 GINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGT 240
           GINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGT
Sbjct: 181 GINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGT 240

Query: 241 NVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFY 300
           NVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFY
Sbjct: 241 NVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFY 300

Query: 301 KLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIE 360
           KLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIE
Sbjct: 301 KLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIE 360

Query: 361 RVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAG 420
           RVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAG
Sbjct: 361 RVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAG 420

Query: 421 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ 480
           TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ
Sbjct: 421 TKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ 480

Query: 481 VCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 540
           VCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE
Sbjct: 481 VCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDE 540

Query: 541 ALVAAAQLSYQYIRYVTIE 560
           ALVAAAQLSYQYIRYVTIE
Sbjct: 541 ALVAAAQLSYQYIRYVTIE 559

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BLAST of Carg24562 vs. NCBI nr
Match: KAG6587387.1 (hypothetical protein SDJN03_15952, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 840.5 bits (2170), Expect = 8.4e-240
Identity = 461/531 (86.82%), Postives = 466/531 (87.76%), Query Frame = 0


Query: 23  SFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGS 82
           +FSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGS
Sbjct: 49  NFSFSFSFKFFKSVDIMARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGS 108

Query: 83  RIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIM 142
           RIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIM
Sbjct: 109 RIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIM 168

Query: 143 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 202
           LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV
Sbjct: 169 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 228

Query: 203 AVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVL 262
           AVEIPFTPRAKRVLELSLEEARQL H +     L  G     +L +        V  RVL
Sbjct: 229 AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVL 288

Query: 263 QLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVG 322
           +                     P  I                QVIRMVGESTEAVGAGVG
Sbjct: 289 E----------------NLGADPSNIR--------------TQVIRMVGESTEAVGAGVG 348

Query: 323 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGV 382
           GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGV
Sbjct: 349 GGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGV 408

Query: 383 GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 442
           GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD
Sbjct: 409 GKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD 468

Query: 443 EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALE 502
           EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALE
Sbjct: 469 EIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALE 528

Query: 503 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 529 RRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 538

[Close]

BLAST of Carg24562 vs. NCBI nr
Match: KAA0057729.1 (ATP-dependent clp protease [Cucumis melo var. makuwa] >TYJ98414.1 ATP-dependent clp protease [Cucumis melo var. makuwa])

HSP 1 Score: 815.1 bits (2104), Expect = 3.8e-232
Identity = 446/520 (85.77%), Postives = 460/520 (88.46%), Query Frame = 0


Query: 35  SVDIMARVLVQSTNIPGLVGGRKTGL-SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGF 94
           +VDIMARVLVQSTNIPGLVGGRK GL SRGS +VKRAV+MMA+ H+PG RIR+FSGLRGF
Sbjct: 6   AVDIMARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGF 65

Query: 95  NSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGH 154
           NSLDNMLR+ QDFHSK+AITISSRRRKA+RCVPRAMFERFTEKAIKVIMLAQEEARRLGH
Sbjct: 66  NSLDNMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGH 125

Query: 155 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 214
           NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK
Sbjct: 126 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 185

Query: 215 RVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLI 274
           RVLELSLEEARQL H +     L  G     +L +        V  RVL           
Sbjct: 186 RVLELSLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVL----------- 245

Query: 275 LVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL 334
                  +    D   L  FIFNL+FY LSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL
Sbjct: 246 -------ENLGADPSKL--FIFNLMFYNLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL 305

Query: 335 EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 394
           EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ
Sbjct: 306 EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 365

Query: 395 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 454
           RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT
Sbjct: 366 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 425

Query: 455 LIGAGAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 514
           LIGAGAAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP
Sbjct: 426 LIGAGAAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEP 485

Query: 515 SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 486 SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 494

[Close]

BLAST of Carg24562 vs. NCBI nr
Match: XP_022974427.1 (chaperone protein ClpC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 810.8 bits (2093), Expect = 7.2e-231
Identity = 445/515 (86.41%), Postives = 449/515 (87.18%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVLVQSTNIPGLVGGRK GLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. NCBI nr
Match: XP_022927645.1 (chaperone protein ClpC, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 808.5 bits (2087), Expect = 3.6e-230
Identity = 444/515 (86.21%), Postives = 449/515 (87.18%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLR FNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLREFNSLDN 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           MLRTRQDFHSKVAITISSRRRKAT+CVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATKCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. ExPASy Swiss-Prot
Match: P35100 (Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 3.0e-200
Identity = 387/515 (75.15%), Postives = 412/515 (80.00%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVL QS ++PGLV G K    +GS   KR+V+ M ++   G R+  FSGLR FN L+ 
Sbjct: 1   MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           M+R   DFHSKV+  +SSRR +A R +PRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           S EEARQL H +     L  G     +L +        V  RVL                
Sbjct: 181 SQEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVL---------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
             +    D  +            +  QVIRMVGES ++V A VG GSS NK PTLEEYGT
Sbjct: 241 --ENLGADPTN------------IRTQVIRMVGESADSVTATVGSGSSNNKTPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSD+IILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDP LERRFQPVKVPEP+VDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEAL+AAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 1.2e-199
Identity = 388/515 (75.34%), Postives = 409/515 (79.42%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MAR LVQST+IP  V G +T    GS   KRAV M+ +  +    +R F+GLRG N++D 
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           ++R+ +   SKVA     RR +  R VP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  LVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGES EAVGA VGGG+SG KMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDE LVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 3.2e-197
Identity = 386/517 (74.66%), Postives = 413/517 (79.88%), Query Frame = 0


Query: 38  IMARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLD 97
           +MAR LVQSTNI   V G + G   GS   +R VRM+ +V    SR+ +F+GLRG N+LD
Sbjct: 1   MMARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALD 60

Query: 98  NML-RTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFV 157
            +L ++ +  HSKVA     RR +  R VP+AMFERFTEKAIKVIMLAQEEARRLGHNFV
Sbjct: 61  TLLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFV 120

Query: 158 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVL 217
           GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGF+AVEIPFTPRAKRVL
Sbjct: 121 GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVL 180

Query: 218 ELSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVT 277
           ELSLEEARQL H +     L  G     +L +        V  RVL              
Sbjct: 181 ELSLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVL-------------- 240

Query: 278 FALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEY 337
               +    D  +            +  QVIRMVGES+EAVGA VGGG+SG KMPTLEEY
Sbjct: 241 ----ENLGADPTN------------IRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEY 300

Query: 338 GTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA 397
           GTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA
Sbjct: 301 GTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA 360

Query: 398 NGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG 457
           NGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG
Sbjct: 361 NGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIG 420

Query: 458 AGAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVD 517
           AGAAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVD
Sbjct: 421 AGAAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVD 476

Query: 518 ETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           ETIQILKGLRERYEIHHKL YTDEA+ AAA+LS+QYI
Sbjct: 481 ETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYI 476

[Close]

BLAST of Carg24562 vs. ExPASy Swiss-Prot
Match: Q9FI56 (Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 PE=1 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 4.0e-192
Identity = 383/514 (74.51%), Postives = 409/514 (79.57%), Query Frame = 0


Query: 41  RVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMAS-VHAPGSRIRSFSGLRGFNSLDNM 100
           RVL QST  P L   ++   SRGS   +R+V+MM S +   G R++ F GLRG N+LD +
Sbjct: 6   RVLAQSTP-PSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDTL 65

Query: 101 LRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 160
            ++RQDFHSKV   ++  + KA+R   +AMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
Sbjct: 66  GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 125

Query: 161 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 220
           QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 126 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 185

Query: 221 LEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFAL 280
           LEEARQL H +     L  G     +L +        V  RVL+                
Sbjct: 186 LEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE---------------- 245

Query: 281 RQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTN 340
                P  I                QVIRMVGE+ E V A VGGGSS NKMPTLEEYGTN
Sbjct: 246 NLGADPSNIR--------------TQVIRMVGENNE-VTANVGGGSSSNKMPTLEEYGTN 305

Query: 341 LTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 400
           LTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GD
Sbjct: 306 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 365

Query: 401 VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 460
           VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGA
Sbjct: 366 VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGA 425

Query: 461 AEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETI 520
           AEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETI
Sbjct: 426 AEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI 476

Query: 521 QILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           QILKGLRERYEIHHKLRYTDE+LVAAAQLSYQYI
Sbjct: 486 QILKGLRERYEIHHKLRYTDESLVAAAQLSYQYI 476

[Close]

BLAST of Carg24562 vs. ExPASy Swiss-Prot
Match: Q7F9I1 (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 657.9 bits (1696), Expect = 1.0e-187
Identity = 375/511 (73.39%), Postives = 402/511 (78.67%), Query Frame = 0


Query: 43  LVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDNMLRT 102
           LVQS   P +   R++G +R    V+    MM ++      +  F GLR  N LD+    
Sbjct: 5   LVQSAIAPTIY--RRSGTAR--FRVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSVI 64

Query: 103 RQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQIL 162
           ++DF S VA  IS  R   +R V RAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQIL
Sbjct: 65  KRDFGSIVASQISRPRGLGSRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQIL 124

Query: 163 LGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEE 222
           LGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEE
Sbjct: 125 LGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEE 184

Query: 223 ARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQE 282
           ARQL H +     L  G     +L +        V  RVL+ +                 
Sbjct: 185 ARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLESL----------------G 244

Query: 283 FHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTK 342
             P+ I                QVIRMVGESTEAVGAGVGGGSSG KMPTLEEYGTNLTK
Sbjct: 245 ADPNNIR--------------TQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTK 304

Query: 343 LAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPE 402
           LAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI+NGDVPE
Sbjct: 305 LAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPE 364

Query: 403 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEG 462
           TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEG
Sbjct: 365 TIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEG 424

Query: 463 AIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQIL 522
           AIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQIL
Sbjct: 425 AIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQIL 470

Query: 523 KGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           +GLRERYE+HHKLRYTD++L+AAAQLSYQYI
Sbjct: 485 RGLRERYELHHKLRYTDDSLIAAAQLSYQYI 470

[Close]

BLAST of Carg24562 vs. ExPASy TrEMBL
Match: A0A5D3BH35 (ATP-dependent clp protease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00100 PE=3 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 1.8e-232
Identity = 446/520 (85.77%), Postives = 460/520 (88.46%), Query Frame = 0


Query: 35  SVDIMARVLVQSTNIPGLVGGRKTGL-SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGF 94
           +VDIMARVLVQSTNIPGLVGGRK GL SRGS +VKRAV+MMA+ H+PG RIR+FSGLRGF
Sbjct: 6   AVDIMARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGF 65

Query: 95  NSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGH 154
           NSLDNMLR+ QDFHSK+AITISSRRRKA+RCVPRAMFERFTEKAIKVIMLAQEEARRLGH
Sbjct: 66  NSLDNMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGH 125

Query: 155 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 214
           NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK
Sbjct: 126 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 185

Query: 215 RVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLI 274
           RVLELSLEEARQL H +     L  G     +L +        V  RVL           
Sbjct: 186 RVLELSLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVL----------- 245

Query: 275 LVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL 334
                  +    D   L  FIFNL+FY LSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL
Sbjct: 246 -------ENLGADPSKL--FIFNLMFYNLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTL 305

Query: 335 EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 394
           EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ
Sbjct: 306 EEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQ 365

Query: 395 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 454
           RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT
Sbjct: 366 RIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHT 425

Query: 455 LIGAGAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEP 514
           LIGAGAAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP
Sbjct: 426 LIGAGAAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEP 485

Query: 515 SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 486 SVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 494

[Close]

BLAST of Carg24562 vs. ExPASy TrEMBL
Match: A0A6J1IA80 (chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473094 PE=3 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 3.5e-231
Identity = 445/515 (86.41%), Postives = 449/515 (87.18%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVLVQSTNIPGLVGGRK GLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. ExPASy TrEMBL
Match: A0A6J1EPJ5 (chaperone protein ClpC, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434444 PE=3 SV=1)

HSP 1 Score: 808.5 bits (2087), Expect = 1.7e-230
Identity = 444/515 (86.21%), Postives = 449/515 (87.18%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLR FNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLREFNSLDN 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           MLRTRQDFHSKVAITISSRRRKAT+CVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRTRQDFHSKVAITISSRRRKATKCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. ExPASy TrEMBL
Match: E5GBL8 (ATP-dependent clp protease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 1.1e-229
Identity = 441/516 (85.47%), Postives = 455/516 (88.18%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGL-SRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLD 98
           MARVLVQSTNIPGLVGGRK GL SRGS +VKRAV+MMA+ H+PG RIR+FSGLRGFNSLD
Sbjct: 1   MARVLVQSTNIPGLVGGRKNGLTSRGSASVKRAVKMMATAHSPGLRIRNFSGLRGFNSLD 60

Query: 99  NMLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 158
           NMLR+ QDFHSK+AITISSRRRKA+RCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 61  NMLRSGQDFHSKMAITISSRRRKASRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 120

Query: 159 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 218
           TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE
Sbjct: 121 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLE 180

Query: 219 LSLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTF 278
           LSLEEARQL H +     L  G     +L +        V  RVL+ +            
Sbjct: 181 LSLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLENLGK---------- 240

Query: 279 ALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYG 338
                          FIFNL+FY LSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYG
Sbjct: 241 --------------LFIFNLMFYNLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYG 300

Query: 339 TNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAN 398
           TNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAN
Sbjct: 301 TNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIAN 360

Query: 399 GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 458
           GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA
Sbjct: 361 GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGA 420

Query: 459 GAAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDE 518
           GAAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDE
Sbjct: 421 GAAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDE 480

Query: 519 TIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           TIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 TIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 481

[Close]

BLAST of Carg24562 vs. ExPASy TrEMBL
Match: A0A3Q8R4B5 (Chaperone protein ClpC OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 801.2 bits (2068), Expect = 2.7e-228
Identity = 440/515 (85.44%), Postives = 447/515 (86.80%), Query Frame = 0


Query: 39  MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLRGFNSLDN 98
           MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLR FNSLDN
Sbjct: 1   MARVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMASVHAPGSRIRSFSGLREFNSLDN 60

Query: 99  MLRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 158
           MLR  QDFHS+VAITISSRRRKA+RCVP+AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MLRNGQDFHSRVAITISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 159 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 218
           EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 219 SLEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFA 278
           SLEEARQL H +     L  G     +L +        V  RVL+               
Sbjct: 181 SLEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE--------------- 240

Query: 279 LRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 338
                 P  I                QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT
Sbjct: 241 -NLGADPSNIR--------------TQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGT 300

Query: 339 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 398
           NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG
Sbjct: 301 NLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANG 360

Query: 399 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 458
           DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG
Sbjct: 361 DVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAG 420

Query: 459 AAEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 518
           AAEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET
Sbjct: 421 AAEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDET 474

Query: 519 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI
Sbjct: 481 IQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 474

[Close]

BLAST of Carg24562 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 672.5 bits (1734), Expect = 2.8e-193
Identity = 383/514 (74.51%), Postives = 409/514 (79.57%), Query Frame = 0


Query: 41  RVLVQSTNIPGLVGGRKTGLSRGSVNVKRAVRMMAS-VHAPGSRIRSFSGLRGFNSLDNM 100
           RVL QST  P L   ++   SRGS   +R+V+MM S +   G R++ F GLRG N+LD +
Sbjct: 6   RVLAQSTP-PSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALDTL 65

Query: 101 LRTRQDFHSKVAITISSRRRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 160
            ++RQDFHSKV   ++  + KA+R   +AMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
Sbjct: 66  GKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE 125

Query: 161 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 220
           QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
Sbjct: 126 QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS 185

Query: 221 LEEARQLDHGFKSESLLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFAL 280
           LEEARQL H +     L  G     +L +        V  RVL+                
Sbjct: 186 LEEARQLGHNYIGSEHLLLG-----LLREGE-----GVAARVLE---------------- 245

Query: 281 RQEFHPDTIHLFYFIFNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTN 340
                P  I                QVIRMVGE+ E V A VGGGSS NKMPTLEEYGTN
Sbjct: 246 NLGADPSNIR--------------TQVIRMVGENNE-VTANVGGGSSSNKMPTLEEYGTN 305

Query: 341 LTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 400
           LTKLAEEGKLDPVVGRQ QIERV QILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GD
Sbjct: 306 LTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGD 365

Query: 401 VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 460
           VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGA
Sbjct: 366 VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGA 425

Query: 461 AEGAIDAANILKPALARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETI 520
           AEGAIDAANILKPALARGELQ CIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETI
Sbjct: 426 AEGAIDAANILKPALARGELQ-CIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI 476

Query: 521 QILKGLRERYEIHHKLRYTDEALVAAAQLSYQYI 554
           QILKGLRERYEIHHKLRYTDE+LVAAAQLSYQYI
Sbjct: 486 QILKGLRERYEIHHKLRYTDESLVAAAQLSYQYI 476

[Close]

BLAST of Carg24562 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 644.8 bits (1662), Expect = 6.3e-185
Identity = 365/484 (75.41%), Postives = 389/484 (80.37%), Query Frame = 0


Query: 71  VRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMF 130
           V+MM+S+ AP   I+SFSGLR  ++LD + R    F  K  +  SS R KA+RCVP+AMF
Sbjct: 56  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 115

Query: 131 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 190
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 116 ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 175

Query: 191 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQST 250
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQL H +     L  G     +L +  
Sbjct: 176 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG-----LLREGE 235

Query: 251 CFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMV 310
                 V  RVL+                     P  I                QVIRMV
Sbjct: 236 -----GVAARVLE----------------NLGADPSNIR--------------TQVIRMV 295

Query: 311 GESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRR 370
           GE+ E V A VGGGSSGN KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QIL RR
Sbjct: 296 GENNE-VTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARR 355

Query: 371 TKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEE 430
           TKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGK VITLDMGLLVAGTKYRGEFEE
Sbjct: 356 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEE 415

Query: 431 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQVCIGATTLD 490
           RLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ CIGATT+D
Sbjct: 416 RLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ-CIGATTID 475

Query: 491 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 550
           EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALVAAAQLS
Sbjct: 476 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 497

Query: 551 YQYI 554
           +QYI
Sbjct: 536 HQYI 497

[Close]

BLAST of Carg24562 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 644.8 bits (1662), Expect = 6.3e-185
Identity = 365/484 (75.41%), Postives = 389/484 (80.37%), Query Frame = 0


Query: 71  VRMMASVHAPGSRIRSFSGLRGFNSLDNMLRTRQDFHSKVAITISSRRRKATRCVPRAMF 130
           V+MM+S+ AP   I+SFSGLR  ++LD + R    F  K  +  SS R KA+RCVP+AMF
Sbjct: 25  VKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKASRCVPKAMF 84

Query: 131 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVE 190
           ERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD+RVE
Sbjct: 85  ERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVE 144

Query: 191 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQST 250
           VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQL H +     L  G     +L +  
Sbjct: 145 VEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG-----LLREGE 204

Query: 251 CFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIRMV 310
                 V  RVL+                     P  I                QVIRMV
Sbjct: 205 -----GVAARVLE----------------NLGADPSNIR--------------TQVIRMV 264

Query: 311 GESTEAVGAGVGGGSSGN-KMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRR 370
           GE+ E V A VGGGSSGN KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERV QIL RR
Sbjct: 265 GENNE-VTASVGGGSSGNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILARR 324

Query: 371 TKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEE 430
           TKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGK VITLDMGLLVAGTKYRGEFEE
Sbjct: 325 TKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEE 384

Query: 431 RLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQVCIGATTLD 490
           RLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ CIGATT+D
Sbjct: 385 RLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ-CIGATTID 444

Query: 491 EYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLS 550
           EYRKHIEKDPALERRFQPVKVPEP+V+E IQIL+GLRERYEIHHKLRYTDEALVAAAQLS
Sbjct: 445 EYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQGLRERYEIHHKLRYTDEALVAAAQLS 466

Query: 551 YQYI 554
           +QYI
Sbjct: 505 HQYI 466

[Close]

BLAST of Carg24562 vs. TAIR 10
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 317.8 bits (813), Expect = 1.8e-86
Identity = 212/405 (52.35%), Postives = 240/405 (59.26%), Query Frame = 0


Query: 129 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 188
           MFERFTEKAIKVI LAQEEARRLG+NF GTE ILL LIGEGTGIAAKVLKSMGINLKDAR
Sbjct: 1   MFERFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDAR 60

Query: 189 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSESLLSAGTNVTIILDQ 248
           VEVEKIIGRGSGFV VEIPFTPR                        ++ G++ T     
Sbjct: 61  VEVEKIIGRGSGFVVVEIPFTPRK------------------ACAGFVTRGSSTTRHKG- 120

Query: 249 STCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFIFNLIFYKLSEQVIR 308
                   + VRVL+++                   P  I       N      S+Q   
Sbjct: 121 --------IAVRVLEIL----------------GADPSNIRT---QVNAPILVNSQQA-- 180

Query: 309 MVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGR 368
           +V E  E     VG                        GKLDPVVGRQ QI+RV QIL R
Sbjct: 181 LVAEVMETATWQVGN--------------------TRRGKLDPVVGRQPQIKRVVQILAR 240

Query: 369 RT-KNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEF 428
           RT +NN CLIG+PGVGK AIAEG+AQRIA+GDVPETI+GK  +  + G      + RG+ 
Sbjct: 241 RTCRNNACLIGKPGVGKRAIAEGIAQRIASGDVPETIKGKMNVAGNCGWNEIRWRSRGKI 300

Query: 429 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQVCIGATT 488
           E       E   QSD+IILFIDE+H LIGAGA EGAIDAANILKPAL R ELQ       
Sbjct: 301 E-------EVYGQSDDIILFIDEMHLLIGAGAVEGAIDAANILKPALERCELQ------- 320

Query: 489 LDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIH 533
              YRKHIE DPALERRFQPVKVPEP+V+E IQI   L +  E++
Sbjct: 361 ---YRKHIENDPALERRFQPVKVPEPTVEEAIQITTVLAKGKEVN 320

[Close]

BLAST of Carg24562 vs. TAIR 10
Match: AT5G15450.1 (casein lytic proteinase B3 )

HSP 1 Score: 306.6 bits (784), Expect = 4.1e-83
Identity = 192/440 (43.64%), Postives = 258/440 (58.64%), Query Frame = 0


Query: 118 RRKATRCVPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVL 177
           R +A+    R   + FTE A + I+ + + A+      V TE ++  L+ +  G+A ++ 
Sbjct: 67  RCEASSSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARRIF 126

Query: 178 KSMGINLKDARVEVEKIIGRGS---GFVAVEIPFTPRAKRVLELSLEEARQLDHGFKSES 237
             +G++        EK I R     G  A  +       R LE   + ARQ     K   
Sbjct: 127 SKIGVDNTKVLEATEKFIQRQPKVYGDAAGSM-----LGRDLEALFQRARQFKKDLKDS- 186

Query: 238 LLSAGTNVTIILDQSTCFWVYFVKVRVLQLVFLKTWVLILVTFALRQEFHPDTIHLFYFI 297
                                +V V  L           ++ FA  + F       F   
Sbjct: 187 ---------------------YVSVEHL-----------VLAFADDKRFGKQLFKDF--- 246

Query: 298 FNLIFYKLSEQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVG 357
                 ++SE+ ++   ES     + +     G K   LE+YG +LT +A EGKLDPV+G
Sbjct: 247 ------QISERSLKSAIESIRGKQSVIDQDPEG-KYEALEKYGKDLTAMAREGKLDPVIG 306

Query: 358 RQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDM 417
           R  +I R  QIL RRTKNNP LIGEPGVGKTAI+EGLAQRI  GDVP+ +  +K+I+LDM
Sbjct: 307 RDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDVPQALMNRKLISLDM 366

Query: 418 GLLVAGTKYRGEFEERLKKLMEEIKQSD-EIILFIDEVHTLIGAGAAEGAIDAANILKPA 477
           G L+AG KYRGEFE+RLK +++E+  S+ +IILFIDE+HT++GAGA  GA+DA N+LKP 
Sbjct: 367 GALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPM 426

Query: 478 LARGELQVCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHH 537
           L RGEL+ CIGATTLDEYRK+IEKDPALERRFQ V V +P+V++TI IL+GLRERYE+HH
Sbjct: 427 LGRGELR-CIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTISILRGLRERYELHH 457

Query: 538 KLRYTDEALVAAAQLSYQYI 554
            +R +D ALV AA LS +YI
Sbjct: 487 GVRISDSALVEAAILSDRYI 457

The following BLAST results are available for this feature:

BLAST of Carg24562 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021370.1	1.1e-308	100.00	hypothetical protein SDJN02_15095, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587387.1	8.4e-240	86.82	hypothetical protein SDJN03_15952, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0057729.1	3.8e-232	85.77	ATP-dependent clp protease [Cucumis melo var. makuwa] >TYJ98414.1 ATP-dependent ...	[more]
XP_022974427.1	7.2e-231	86.41	chaperone protein ClpC, chloroplastic [Cucurbita maxima]	[more]
XP_022927645.1	3.6e-230	86.21	chaperone protein ClpC, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of Carg24562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35100	3.0e-200	75.15	Chaperone protein ClpC, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P31542	1.2e-199	75.34	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic ...	[more]
P31541	3.2e-197	74.66	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]
Q9FI56	4.0e-192	74.51	Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 ...	[more]
Q7F9I1	1.0e-187	73.39	Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Carg24562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BH35	1.8e-232	85.77	ATP-dependent clp protease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1IA80	3.5e-231	86.41	chaperone protein ClpC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147309...	[more]
A0A6J1EPJ5	1.7e-230	86.21	chaperone protein ClpC, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
E5GBL8	1.1e-229	85.47	ATP-dependent clp protease OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A3Q8R4B5	2.7e-228	85.44	Chaperone protein ClpC OS=Cucurbita moschata OX=3662 PE=2 SV=1	[more]

BLAST of Carg24562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50920.1	2.8e-193	74.51	CLPC homologue 1	[more]
AT3G48870.1	6.3e-185	75.41	Clp ATPase	[more]
AT3G48870.2	6.3e-185	75.41	Clp ATPase	[more]
AT3G45450.1	1.8e-86	52.35	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfam...	[more]
AT5G15450.1	4.1e-83	43.64	casein lytic proteinase B3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 424..444
None	No IPR available	PANTHER	PTHR11638:SF169	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B, CHLOROPLASTIC	coord: 114..554
None	No IPR available	PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	coord: 114..554
None	No IPR available	CDD	cd00009	AAA	coord: 353..506 e-value: 2.23851E-22 score: 91.8239
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 370..511 e-value: 1.8E-12 score: 57.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 515..556 e-value: 5.4E-14 score: 54.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 323..514 e-value: 6.6E-84 score: 282.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 330..554
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 129..239 e-value: 9.9E-38 score: 131.4
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 131..234
IPR041546	ClpA/ClpB, AAA lid domain	PFAM	PF17871	AAA_lid_9	coord: 514..554 e-value: 1.3E-11 score: 44.3
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 375..505 e-value: 2.2E-15 score: 57.2
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 144..196 e-value: 1.2E-17 score: 63.7
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 130..230 score: 27.303791
IPR018368	ClpA/B, conserved site 1	PROSITE	PS00870	CLPAB_1	coord: 465..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24562-RA	Carg24562-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008233	peptidase activity