Carg24529 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24529
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 12 isoform X2
LocationCarg_Chr19: 1711432 .. 1714414 (+)
RNA-Seq ExpressionCarg24529
SyntenyCarg24529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGGGAAACGTGGTCCATGTGATCCCCGGGATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCCAGAAGCTCACAGGATGTTACCTCTTCCAATCGATCAAAAGCGATTGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTTCGTGCTGGAACCTGCCCTTACATCACGAACTGCAATTTCGCTCATAGCATTGAGGAGCTCCGGCGGCCACCACATAATTGGCAGGTATTAGAATTGGTTCTTAGTTAGTATTTTGTGTTAGGAATCACGACTCTCCACACAATAGTATGATATTTAGTATGATATTGTCTATTTTAAGCTAGAGCCTCCTCTTAGGTCTATGTAGCCGTTCGACACGTAAGTCACTTTTGATTACATCTTCCAAGCAAGCAATTGCTTTGTTAGGATTCTCGACATGACACTCTGATACTATGTTAGGAATCATAACACTCCACCATGAGCATTGCTTTGGGCTTTGCTTATAATGGAGATGTATTTCTTACTTATGAACTCATGATCATTAGCCAAGGGAAGGCTTTCCAAAAGGCCTCATATAATGGAGATGTATTTTTTACTTATGAACTCATGATCATTAGCCAACGTGGGACTCCCTCCTAACCGTGCTCAACATTTTGTTGGGTTTAATTTTTAGAATATCAAGAGTTCCTAATTGCAATGAGTGTTGTTAGCAGGAAATTGTGGCGGCACATGAAGAAGAGAAGGTATTTTCAGAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGGTATGTTTCTTCTATTATCAATCCTTGTGTTAATGACATAGCTCATTCTTTGCTTTGGGTCTAGGACTCCATCATGAACATGCTAGAAACTTCTTAATTGTGGAACTTGAATGACACTATAATATTTGTGAGATCCCACGTCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGAAAACTTCTTCCTACTAGACGCGTTTTGAAAAACCTTGAGGGAAATCCGAAAGGGAAAACCCAAAGAGGGCAATATGTGTTAGTAGTGGTCTTAGGCTGTTACAAATGATATCAGAGCCAGACACTGGACGGTGTGTCAGCAAGGATGCTGAGTCCTGAAGGGGGTGGACATTGGGCGATGTGCCAGCGAGGACGCTGGCCCCCATGGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACAAAGCATTTTTTATAAGGGTGTGGAAAACTCTTCTTAGCGGATGCGTTTTAAAAACTTTAGGGGAAGCCCGAGAGGGAAAGCCCAAAGAGGACAATATCTGTTATTGGTAGGCTTGGGTTATTTTGTATCAGAGCCAGACACCGGGCGATGTACCAGCGAGGAGGCTGAGCCCCAAAGGGGGTACACACCAGGCGGTGTGCCCGCGAGTACGTTGGGTCCTAAAGGAGGTGGATTGGGGGACCCACATCGATTGGAGAGAGGAACGAGTGCCAACGAGAATGTTAGCCCCAAAGGGGGTAGGTTGTGGAGATCCCACATCGGTTGGAGAGCGGAATGAAACATATTCTTTATAAGGGTGTGGAAATCTCTCCCTACCAGACGCGTTTTAAAAACCTCGAGGGAAAATCCGAAAGGGAAGTTTATATCGACAAAGTGTATAAGTTGAGGATCAACATGGTTATGCCATATGCTGATTTGTTGTCATTCTCATGCATATCTAACAATGCTTCCATGCTTTTGTTTCTTTGAATTACTGATATTTATCTGAACGTCGATATAGCCATATAGACCGAGTCGGTTACTTGTTTAGACCGATAAACATACGAACATTGTCGTGTCCCGTTGAACAAAACGGATATTGAACGAGCTGTTTAGTTTGTGGTTTAGATTTAATACTTTGAATTAACCACAGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTTTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAATATCATATTCAAGAAACCGTTGAACGTGAATAACGAGCATCATGATGGACTTGGTCTCTTGTAAACCTTTGGCAGATGAAGATTCTGTTTGTTCGGGTTATGTTTCGGTTGGTTCTTTTCGTATTCTCGTTCCTAACCCGCTTCATGTCCGATCTATGGTCTTTATCTGTTAGTGTTGTTATTTATGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAGAGAGAAATGTATGATTTTCACCACTTATCAGTTCATCATGGTCTTCGATCTTAATGTAATGGGAACTAAGGAGCAAGGCAGAGTGTCGTAGTCATGTTTGTCTAAGACGTGTTGTCTATGAGCGCATATCCGT

mRNA sequence

TGGGGGAAACGTGGTCCATGTGATCCCCGGGATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCCAGAAGCTCACAGGATGTTACCTCTTCCAATCGATCAAAAGCGATTGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTTCAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTTTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAATATCATATTCAAGAAACCGTTGAACGTGAATAACGAGCATCATGATGGACTTGGTCTCTTGTAAACCTTTGGCAGATGAAGATTCTGTTTGTTCGGGTTATGTTTCGGTTGGTTCTTTTCGTATTCTCGTTCCTAACCCGCTTCATGTCCGATCTATGGTCTTTATCTGTTAGTGTTGTTATTTATGTAGTTACTATATGTAATCCTTTTCATTGAAAGAAGAGAGAAATGTATGATTTTCACCACTTATCAGTTCATCATGGTCTTCGATCTTAATGTAATGGGAACTAAGGAGCAAGGCAGAGTGTCGTAGTCATGTTTGTCTAAGACGTGTTGTCTATGAGCGCATATCCGT

Coding sequence (CDS)

ATGAGTAGCGAGAATTGGCCCGGTGAAGTTTGGGCTACCGAAGAAGAATACAGAGCTTGGAACAATGGCGGTGGTGATGGTTCCATTGATACGCCTTCTAATTCGAGTTATGATCAAAGACAATCCCAAAGCCGATCCGGAAGCGAACCCCCAAACAAGAAATCCAGAAGCTCACAGGATGTTACCTCTTCCAATCGATCAAAAGCGATTGGTAAAATGTTCTTCAAGACCAAACTCTGCTGCAAATTTCAGCCAAGGGAGGAATTTCAGATTCCTTCACTTGGGACATCAAATTTTGGTTCAGAGTCGCAGAGGTCATATAAAGGAAGACATTGCAAGAAGTTTTACACAGAGGAGGGCTGTCCATATGGGGATAGTTGTACGTTTCTTCATGATGAGCAGTCAAAGAATCGAGAGAGTGTGGCAATAAGCTTGGGACCTGGTGGCTACAGTGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTTCAGGAAATGGATCCAACAGTAAGCCTTCGAATTGGAAAACAAGGATTTGTAACAAGTGGGAGTTGACAGGATATTGCCCATTTGGAAGCAAATGCCATTTTGCTCATGGAGCTGCTGAATTACACCGTTATGGTGGTGGGCTTATGGAGACAGAAACTAGAGACTCTTCATCAGCTCCTCCTGACCTGAAGCAGGGTGTATTGCCTAAAGCTCCTGGCGATACTTTGGTTGCTTCTGTTCCTTCACTACCTCATTCAGATGTTTATCATATTGTGGTTCCATCACAGAGGTCAACCATTGTAATTCAGAGGTCGGGTCAGCGAACTCATCAGAAATGGAAGGGCCCCGATAAAATCAGTCGGATATATGGTGACTGGATTGACGACATCGAATAA

Protein sequence

MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFQPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE
Homology
BLAST of Carg24529 vs. NCBI nr
Match: KAG7011383.1 (Zinc finger CCCH domain-containing protein 56 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 597.0 bits (1538), Expect = 8.5e-167
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60

Query: 61  VTSSNRSKAIGKMFFKTKLCCKFQPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEG 120
           VTSSNRSKAIGKMFFKTKLCCKFQPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEG
Sbjct: 61  VTSSNRSKAIGKMFFKTKLCCKFQPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEG 120

Query: 121 CPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRIC 180
           CPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRIC
Sbjct: 121 CPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRIC 180

Query: 181 NKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLV 240
           NKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLV
Sbjct: 181 NKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLV 240

Query: 241 ASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 295
           ASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE
Sbjct: 241 ASVPSLPHSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 294

BLAST of Carg24529 vs. NCBI nr
Match: XP_022963759.1 (zinc finger CCCH domain-containing protein 12 isoform X2 [Cucurbita moschata])

HSP 1 Score: 575.9 bits (1483), Expect = 2.0e-160
Identity = 293/335 (87.46%), Postives = 294/335 (87.76%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEE 134

Query: 121 ----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 180
               +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE
Sbjct: 135 KVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 194

Query: 181 SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH 240
           SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH
Sbjct: 195 SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH 254

Query: 241 GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ 295
           GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ
Sbjct: 255 GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ 314

BLAST of Carg24529 vs. NCBI nr
Match: XP_022963758.1 (zinc finger CCCH domain-containing protein 12 isoform X1 [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160
Identity = 293/336 (87.20%), Postives = 294/336 (87.50%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEE 134

Query: 121 -----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180
                +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR
Sbjct: 135 EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 194

Query: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240
           ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA
Sbjct: 195 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 254

Query: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 295
           HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS
Sbjct: 255 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 314

BLAST of Carg24529 vs. NCBI nr
Match: XP_022963761.1 (zinc finger CCCH domain-containing protein 12 isoform X4 [Cucurbita moschata])

HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160
Identity = 293/336 (87.20%), Postives = 294/336 (87.50%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 61  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEE 120

Query: 121 -----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180
                +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR
Sbjct: 121 EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180

Query: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240
           ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA
Sbjct: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240

Query: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 295
           HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS
Sbjct: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 300

BLAST of Carg24529 vs. NCBI nr
Match: XP_023511668.1 (zinc finger CCCH domain-containing protein 12 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.9 bits (1470), Expect = 6.6e-159
Identity = 293/337 (86.94%), Postives = 294/337 (87.24%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEE 134

Query: 121 ----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 180
               +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE
Sbjct: 135 KVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 194

Query: 181 SVAISLGPGGYS--GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF 240
           SVAISLGPGGYS  GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF
Sbjct: 195 SVAISLGPGGYSGGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF 254

Query: 241 AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVP 295
           AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVP
Sbjct: 255 AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVP 314

BLAST of Carg24529 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.4e-84
Identity = 197/379 (51.98%), Postives = 221/379 (58.31%), Query Frame = 0

Query: 4   ENW-----PGEVWATEEEY-RAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRS 63
           +NW        VWATE++Y RAW           P N+S D         + PPNKK+R 
Sbjct: 24  DNWFPNLGDSAVWATEDDYNRAW--------AMNPDNTSGD--------NNGPPNKKTRG 83

Query: 64  SQDVTS-------SNRSKAIGKMFFKTKLCCKFQ-------------------------- 123
           S   +S       SNR+KAIGKMFFKTKLCCKF+                          
Sbjct: 84  SPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNW 143

Query: 124 -------------------------PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEE 183
                                    PREEFQIPSL +S   +ES RS+KGRHCKKFYTEE
Sbjct: 144 QEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESGRSFKGRHCKKFYTEE 203

Query: 184 GCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGG---------------GGGS 243
           GCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG GG               GGG 
Sbjct: 204 GCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGG 263

Query: 244 GNGSNS-----KPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDS 295
           G+GS S     KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAELHR+GGGL+E E +D 
Sbjct: 264 GSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDG 323

BLAST of Carg24529 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-82
Identity = 188/356 (52.81%), Postives = 221/356 (62.08%), Query Frame = 0

Query: 10  VWATEEEYRA-WN-NGGGDGSIDTPSNSSYDQRQSQSRSGSE--PPNKKSR---SSQDVT 69
           +WATE++Y + WN +GGG GS               SR+GSE  PP KKSR     +   
Sbjct: 31  IWATEDDYNSQWNADGGGGGS---------------SRAGSEQPPPGKKSRGGGGGEGGG 90

Query: 70  SSNRSKAIGKMFFKTKLCCKF--------------------------------------Q 129
           ++++S+AIGKMFFKTKLCCKF                                      +
Sbjct: 91  NTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAHGMEELRKPPPNWQEIVAAHEEATE 150

Query: 130 PREEFQIPSLGTS------------NFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHD 189
            REE QIP + +S              G  S R+YKGRHCKKFYT+EGCPYGD+CTFLHD
Sbjct: 151 AREEHQIPIMTSSGPTAGGDAGCGGGGGGGSGRAYKGRHCKKFYTDEGCPYGDACTFLHD 210

Query: 190 EQSKNRESVAISLGPGGYSGGGGGGGG-----------GGGGSGNGSNSKPSNWKTRICN 249
           EQSK RESVAISL P   S GGGGGGG               +GNG   KPSNWKTRICN
Sbjct: 211 EQSKARESVAISLSP---SVGGGGGGGSYNSAAAAAASASAAAGNGPMQKPSNWKTRICN 270

Query: 250 KWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVL-PKAPGDTLV 295
           KWE+TGYCPFGSKCHFAHGAAELH+YGGGL++ ++RD ++A PD KQ V+  KAP +T  
Sbjct: 271 KWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRD-AAATPDSKQAVVSAKAPAETAA 330

BLAST of Carg24529 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.0e-37
Identity = 110/272 (40.44%), Postives = 141/272 (51.84%), Query Frame = 0

Query: 25  GDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFQ 84
           GD S+   +   Y +  + +  G+E P+KK+RSS        S  IGK FFKTKLC KF+
Sbjct: 30  GDSSV-WATEDDYSRVWAINSDGAESPSKKTRSSS-------SSEIGKSFFKTKLCFKFR 89

Query: 85  PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAIS 144
                     GT  + + S          +        + ++ T    E S+NRES A+S
Sbjct: 90  ---------AGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT----EASRNRESFAVS 149

Query: 145 LGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAEL 204
           LGP G                     K  NWKTRICNKW+ TGYCPFGS CHFAHG +EL
Sbjct: 150 LGPRG---------------NVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 209

Query: 205 HRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQR--ST 264
           H +GGGL+E E +  +SA  D KQ    +   DT+ + V            V SQR  S 
Sbjct: 210 HTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTSLVSP---------GVSSQRTSSA 252

Query: 265 IVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 295
           +  + +G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 270 VTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

BLAST of Carg24529 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.9e-17
Identity = 75/226 (33.19%), Postives = 106/226 (46.90%), Query Frame = 0

Query: 86  REEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS-------KNR 145
           RE   +  +  +N+  + +   + + C+KF   E CPYGD C F+H++ S       K R
Sbjct: 163 RERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLR 222

Query: 146 ESVAISLGPGGYSGGGGGGGG----GGGGS-------GNGSNSKPSNWKTRICNKWELTG 205
           ES  IS+G                    GS        NG   K   WKTR+C K+++TG
Sbjct: 223 ESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITG 282

Query: 206 YCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLP 265
            CPFG KCHFAHG AELH    G +E E  ++ ++    KQ V+   P +   A  P   
Sbjct: 283 QCPFGDKCHFAHGQAELHN-SVGRVEGEAMNAVASVN--KQAVV---PANEAFAMKPITQ 342

Query: 266 HSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDI 294
                   V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 343 --------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

BLAST of Carg24529 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-06
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0

Query: 108 KGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGSGNG 167
           K + C KF++  GCP+G SC FLH+     + +  ++   G       G    G G+ NG
Sbjct: 34  KLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNG 93

Query: 168 SNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAEL 205
             +  S+ KTR+CNK+     C +GSKCHFAHG  EL
Sbjct: 94  PPT--SSVKTRMCNKYNTAEGCKWGSKCHFAHGEREL 128

BLAST of Carg24529 vs. ExPASy TrEMBL
Match: A0A6J1HL53 (zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463955 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 9.9e-161
Identity = 293/335 (87.46%), Postives = 294/335 (87.76%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEE 134

Query: 121 ----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 180
               +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE
Sbjct: 135 KVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 194

Query: 181 SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH 240
           SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH
Sbjct: 195 SVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAH 254

Query: 241 GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ 295
           GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ
Sbjct: 255 GAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQ 314

BLAST of Carg24529 vs. ExPASy TrEMBL
Match: A0A6J1HIU8 (zinc finger CCCH domain-containing protein 12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463955 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 293/336 (87.20%), Postives = 294/336 (87.50%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEE 134

Query: 121 -----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180
                +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR
Sbjct: 135 EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 194

Query: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240
           ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA
Sbjct: 195 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 254

Query: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 295
           HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS
Sbjct: 255 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 314

BLAST of Carg24529 vs. ExPASy TrEMBL
Match: A0A6J1HGZ4 (zinc finger CCCH domain-containing protein 12 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111463955 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 293/336 (87.20%), Postives = 294/336 (87.50%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 61  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEE 120

Query: 121 -----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180
                +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR
Sbjct: 121 EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180

Query: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240
           ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA
Sbjct: 181 ESVAISLGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240

Query: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 295
           HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS
Sbjct: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 300

BLAST of Carg24529 vs. ExPASy TrEMBL
Match: A0A6J1HU05 (zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466853 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.7e-158
Identity = 291/336 (86.61%), Postives = 293/336 (87.20%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 15  MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 74

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 75  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEE 134

Query: 121 ----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 180
               +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE
Sbjct: 135 KVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRE 194

Query: 181 SVAISLGPGGYS-GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 240
           SVAISLGPGGYS GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA
Sbjct: 195 SVAISLGPGGYSGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFA 254

Query: 241 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPS 295
           HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPS+PHSDVYHIVVPS
Sbjct: 255 HGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSVPHSDVYHIVVPS 314

BLAST of Carg24529 vs. ExPASy TrEMBL
Match: A0A6J1HQE6 (zinc finger CCCH domain-containing protein 12 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111466853 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.5e-158
Identity = 291/337 (86.35%), Postives = 293/337 (86.94%), Query Frame = 0

Query: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60
           MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD
Sbjct: 1   MSSENWPGEVWATEEEYRAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQD 60

Query: 61  VTSSNRSKAIGKMFFKTKLCCKF------------------------------------- 120
           VTSSNRSKAIGKMFFKTKLCCKF                                     
Sbjct: 61  VTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQQEIVAAHEE 120

Query: 121 -----QPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180
                +PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR
Sbjct: 121 EKVFSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNR 180

Query: 181 ESVAISLGPGGYS-GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF 240
           ESVAISLGPGGYS GGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF
Sbjct: 181 ESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHF 240

Query: 241 AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVP 295
           AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPS+PHSDVYHIVVP
Sbjct: 241 AHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSVPHSDVYHIVVP 300

BLAST of Carg24529 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 314.3 bits (804), Expect = 1.0e-85
Identity = 197/379 (51.98%), Postives = 221/379 (58.31%), Query Frame = 0

Query: 4   ENW-----PGEVWATEEEY-RAWNNGGGDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRS 63
           +NW        VWATE++Y RAW           P N+S D         + PPNKK+R 
Sbjct: 24  DNWFPNLGDSAVWATEDDYNRAW--------AMNPDNTSGD--------NNGPPNKKTRG 83

Query: 64  SQDVTS-------SNRSKAIGKMFFKTKLCCKFQ-------------------------- 123
           S   +S       SNR+KAIGKMFFKTKLCCKF+                          
Sbjct: 84  SPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEELRRPPPNW 143

Query: 124 -------------------------PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEE 183
                                    PREEFQIPSL +S   +ES RS+KGRHCKKFYTEE
Sbjct: 144 QEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESGRSFKGRHCKKFYTEE 203

Query: 184 GCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGG---------------GGGS 243
           GCPYG+SCTFLHDE S+NRESVAISLGPGGY  GGGGG GG               GGG 
Sbjct: 204 GCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVVLGGGG 263

Query: 244 GNGSNS-----KPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYGGGLMETETRDS 295
           G+GS S     KPSNWKTRICNKWE+TGYCPFG+KCHFAHGAAELHR+GGGL+E E +D 
Sbjct: 264 GSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDG 323

BLAST of Carg24529 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.1e-38
Identity = 110/272 (40.44%), Postives = 141/272 (51.84%), Query Frame = 0

Query: 25  GDGSIDTPSNSSYDQRQSQSRSGSEPPNKKSRSSQDVTSSNRSKAIGKMFFKTKLCCKFQ 84
           GD S+   +   Y +  + +  G+E P+KK+RSS        S  IGK FFKTKLC KF+
Sbjct: 30  GDSSV-WATEDDYSRVWAINSDGAESPSKKTRSSS-------SSEIGKSFFKTKLCFKFR 89

Query: 85  PREEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAIS 144
                     GT  + + S          +        + ++ T    E S+NRES A+S
Sbjct: 90  ---------AGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVT----EASRNRESFAVS 149

Query: 145 LGPGGYSGGGGGGGGGGGGSGNGSNSKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAEL 204
           LGP G                     K  NWKTRICNKW+ TGYCPFGS CHFAHG +EL
Sbjct: 150 LGPRG---------------NVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 209

Query: 205 HRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLPHSDVYHIVVPSQR--ST 264
           H +GGGL+E E +  +SA  D KQ    +   DT+ + V            V SQR  S 
Sbjct: 210 HTFGGGLVEGECKIGTSATLDTKQ----RGQVDTVTSLVSP---------GVSSQRTSSA 252

Query: 265 IVIQRSGQRTHQKWKGPDKISRIYGDWIDDIE 295
           +  + +G RT +KWKGPDKISR+YGDWIDDIE
Sbjct: 270 VTQKPNGVRTQRKWKGPDKISRVYGDWIDDIE 252

BLAST of Carg24529 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 89.0 bits (219), Expect = 7.0e-18
Identity = 75/226 (33.19%), Postives = 106/226 (46.90%), Query Frame = 0

Query: 86  REEFQIPSLGTSNFGSESQRSYKGRHCKKFYTEEGCPYGDSCTFLHDEQS-------KNR 145
           RE   +  +  +N+  + +   + + C+KF   E CPYGD C F+H++ S       K R
Sbjct: 163 RERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLR 222

Query: 146 ESVAISLGPGGYSGGGGGGGG----GGGGS-------GNGSNSKPSNWKTRICNKWELTG 205
           ES  IS+G                    GS        NG   K   WKTR+C K+++TG
Sbjct: 223 ESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITG 282

Query: 206 YCPFGSKCHFAHGAAELHRYGGGLMETETRDSSSAPPDLKQGVLPKAPGDTLVASVPSLP 265
            CPFG KCHFAHG AELH    G +E E  ++ ++    KQ V+   P +   A  P   
Sbjct: 283 QCPFGDKCHFAHGQAELHN-SVGRVEGEAMNAVASVN--KQAVV---PANEAFAMKPITQ 342

Query: 266 HSDVYHIVVPSQRSTIVIQRSGQRTHQKWKGPDKISRIYGDWIDDI 294
                   V +  S +  +   ++   KW    KI+RIYGDWIDD+
Sbjct: 343 --------VTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDL 374

BLAST of Carg24529 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-07
Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 157 GGGGGGGSGNGSNSKP---SNWKTRICNKWELTGYCPFGSKCHFAHGAAELHRYG 209
           GGG GGG G GS  KP   SN+KT+IC ++   G C FG +CHFAHG AEL + G
Sbjct: 193 GGGLGGGGGMGSEGKPHPGSNFKTKICERFS-KGNCTFGDRCHFAHGEAELRKSG 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7011383.18.5e-167100.00Zinc finger CCCH domain-containing protein 56 [Cucurbita argyrosperma subsp. arg... [more]
XP_022963759.12.0e-16087.46zinc finger CCCH domain-containing protein 12 isoform X2 [Cucurbita moschata][more]
XP_022963758.12.7e-16087.20zinc finger CCCH domain-containing protein 12 isoform X1 [Cucurbita moschata][more]
XP_022963761.12.7e-16087.20zinc finger CCCH domain-containing protein 12 isoform X4 [Cucurbita moschata][more]
XP_023511668.16.6e-15986.94zinc finger CCCH domain-containing protein 12 isoform X2 [Cucurbita pepo subsp. ... [more]
Match NameE-valueIdentityDescription
Q9LQM31.4e-8451.98Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q84UQ32.3e-8252.81Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX... [more]
Q5PP653.0e-3740.44Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9LT819.9e-1733.19Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q69XQ33.5e-0639.18Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX... [more]
Match NameE-valueIdentityDescription
A0A6J1HL539.9e-16187.46zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita moschata O... [more]
A0A6J1HIU81.3e-16087.20zinc finger CCCH domain-containing protein 12 isoform X1 OS=Cucurbita moschata O... [more]
A0A6J1HGZ41.3e-16087.20zinc finger CCCH domain-containing protein 12 isoform X4 OS=Cucurbita moschata O... [more]
A0A6J1HU052.7e-15886.61zinc finger CCCH domain-containing protein 12 isoform X2 OS=Cucurbita maxima OX=... [more]
A0A6J1HQE63.5e-15886.35zinc finger CCCH domain-containing protein 12 isoform X4 OS=Cucurbita maxima OX=... [more]
Match NameE-valueIdentityDescription
AT1G32360.11.0e-8551.98Zinc finger (CCCH-type) family protein [more]
AT2G35430.12.1e-3840.44Zinc finger C-x8-C-x5-C-x3-H type family protein [more]
AT3G19360.17.0e-1833.19Zinc finger (CCCH-type) family protein [more]
AT3G12130.13.3e-0756.36KH domain-containing protein / zinc finger (CCCH type) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 106..133
e-value: 0.086
score: 22.0
coord: 174..201
e-value: 5.2E-9
score: 45.9
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 175..200
e-value: 5.6E-11
score: 42.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 174..202
score: 15.422161
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 106..134
score: 14.098298
IPR041367E3 ligase, CCCH-type zinc fingerPFAMPF18044zf-CCCH_4coord: 110..132
e-value: 1.9E-7
score: 30.7
NoneNo IPR availableGENE3D4.10.1000.10coord: 167..206
e-value: 1.6E-15
score: 58.2
NoneNo IPR availableGENE3D4.10.1000.10coord: 97..146
e-value: 3.6E-6
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..173
NoneNo IPR availablePANTHERPTHR12547:SF136ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKEcoord: 97..291
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 97..291
NoneNo IPR availablePANTHERPTHR12547:SF136ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 12-LIKEcoord: 9..84
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 9..84
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 172..205
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 105..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24529-RACarg24529-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000976 transcription cis-regulatory region binding