Carg23472 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23472
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Adenosylhomocysteinase, putative
Location	Carg_Chr12: 9592205 .. 9592759 (+)
RNA-Seq Expression	Carg23472
Synteny	Carg23472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

mRNA sequence

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

Coding sequence (CDS)

ATGGGTCTCTCACCATCTTCACCATCACCCTCAATTTCCAGGTCACATTACAACATCCACAAGCTCTTCCTCCTCTGCAACTACATCCTCCTCGGCGCCGCCTCCTCCTGCATTTTCCTAACTCTATCACTCCGCCTCATCCCCTCCGTATGCGGCTTCTTCATAATCTTCCTACACGCATTCACAATCGCCGGCGCTGTCTCCGGCTGCGCCATGGCTGCCGCCGCAACCGGGCGCTGGTTCGGCGTCCATATGGTCTTCACCGTCCTGACCGCCATATTTCAAGGCTCTGTTGCGGTTCTGATTTTCACCAGAACTAGCGATTTCCTTGGGGAACTGAAATCGTACGTCCGGGAGGAAGATGGGTCGGTGATTTTGAAATTGGGCGGCGGATTGAGCTGCTTGATCTTCGGTTTGGAGTGGGTTGTGCTGGTTTTGGCGTTCTGTTTGAAGTATTACTTTTATGTTGAGGGAAATGGAAGTGGTGAGCAGAGAAGTGCTAAGGTTCAACAGTTTGAAGATTCGAAGTGGGCGGCGGCGCCATTCCCAGTTTGA

Protein sequence

MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAAPFPV

Homology

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BLAST of Carg23472 vs. NCBI nr
Match: XP_022937598.1 (uncharacterized protein LOC111443957 [Cucurbita moschata] >KAG6586182.1 hypothetical protein SDJN03_18915, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021013.1 hypothetical protein SDJN02_17701, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180
           DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of Carg23472 vs. NCBI nr
Match: XP_023537990.1 (uncharacterized protein LOC111798872 [Cucurbita pepo subsp. pepo] >XP_023537991.1 uncharacterized protein LOC111798872 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180
           DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAA
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEKRSAKVQQFEDSKWAAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of Carg23472 vs. NCBI nr
Match: XP_022965972.1 (uncharacterized protein LOC111465691 [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 9.3e-95
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180
           DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAA
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEKRSAKVQQFEDSKWAAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of Carg23472 vs. NCBI nr
Match: KAA0051315.1 (uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 168/186 (90.32%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of Carg23472 vs. NCBI nr
Match: XP_038890643.1 (uncharacterized protein LOC120080148 [Benincasa hispida])

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 169/186 (90.86%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S SISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSV VL+FTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVTVLVFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGS--GEQRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEW+VLVLAFCLKYY YVEGNGS  G +RS KVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWIVLVLAFCLKYYMYVEGNGSVEGLKRSGKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of Carg23472 vs. ExPASy TrEMBL
Match: A0A6J1FGF2 (uncharacterized protein LOC111443957 OS=Cucurbita moschata OX=3662 GN=LOC111443957 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180
           DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of Carg23472 vs. ExPASy TrEMBL
Match: A0A6J1HLR5 (uncharacterized protein LOC111465691 OS=Cucurbita maxima OX=3661 GN=LOC111465691 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.5e-95
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA
Sbjct: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+AATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSKWAAA 180
           DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE+RSAKVQQFEDSKWAAA
Sbjct: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEKRSAKVQQFEDSKWAAA 180

Query: 181 PFPV 185
           PFPV
Sbjct: 181 PFPV 184

[Close]

BLAST of Carg23472 vs. ExPASy TrEMBL
Match: A0A5A7UCF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00280 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.8e-83
Identity = 168/186 (90.32%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of Carg23472 vs. ExPASy TrEMBL
Match: A0A0A0LHB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.4e-82
Identity = 168/186 (90.32%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S SIS SHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT+DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGE--QRSAKVQQFEDSKWA 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVEGNG+GE  +RSAKVQQFEDS W 
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTW- 180

Query: 181 AAPFPV 185
           AAPFPV
Sbjct: 181 AAPFPV 184

[Close]

BLAST of Carg23472 vs. ExPASy TrEMBL
Match: A0A5D3DJ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold65819G00010 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 167/187 (89.30%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGLSPSS S S+SRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRL+PSVCGFFIIFLHA
Sbjct: 1   MGLSPSS-STSVSRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLVPSVCGFFIIFLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
           FTIAGAVSGCAMA+A+TGRWFGVHMVFTVLTAIFQGSV VL+FTRT DFLGELKSYVREE
Sbjct: 61  FTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTGDFLGELKSYVREE 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE---GNGSGEQRSAKVQQFEDSKW 180
           DGSVILKLGGGLS LIF LEWVVLVLAFCLKYY YVE   GNG G +RSAKVQQFEDS W
Sbjct: 121 DGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGGNGEGLKRSAKVQQFEDSTW 180

Query: 181 AAAPFPV 185
            AAPFPV
Sbjct: 181 -AAPFPV 185

[Close]

BLAST of Carg23472 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 219.2 bits (557), Expect = 2.8e-57
Identity = 121/180 (67.22%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 6   SSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAG 65
           SS SP +  SHY+ HK+FL  NYILLGAASSCIFLTLSLRLIPS+CGF +I LHA TIA 
Sbjct: 5   SSSSP-VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAA 64

Query: 66  AVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVI 125
           AVSGCA A+    RW+  HMV TVLTAIFQGSV+VLIFT TS FLG LKSYVREED +VI
Sbjct: 65  AVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVI 124

Query: 126 LKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVE-GNGSGEQRSAKVQQFEDSKWAAAPFPV 185
           LKLGGGL  +IF L+W+VLV AF LKYY YV+ G+G   +R+ KVQ  E+ K    PF V
Sbjct: 125 LKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGGDGVAMKRTGKVQSEENPKDWPWPFQV 183

[Close]

BLAST of Carg23472 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 215.7 bits (548), Expect = 3.1e-56
Identity = 120/183 (65.57%), Postives = 138/183 (75.41%), Query Frame = 0


Query: 1   MGLSPSSPSPSISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHA 60
           MGL P  P  SI  SHY  HKLFL  NY+LLGA+SSCIFLTLSLRLIPS+CGFF+I LHA
Sbjct: 1   MGLIP-QPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHA 60

Query: 61  FTIAGAVSGCAMAAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREE 120
            TIA AVSGCA A+    RW+  HM+ TVLTAIFQGSV+VLIFT TS+FL  L SYVRE+
Sbjct: 61  TTIAAAVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREK 120

Query: 121 DGSVILKLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEG--NGSGEQRSAKVQQFE---DS 179
           + S+ILKL GGL  +IF LEW+VLVLAF LKYY YV+G  NG   +R+ KVQ  E   +S
Sbjct: 121 EASMILKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNS 180

[Close]

BLAST of Carg23472 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 7.7e-47
Identity = 107/177 (60.45%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 12  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCA 71
           +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 72  M-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVIL 131
           +     +A A+ R +G HMV TVLTAIFQG+V+VLIFTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 132 KLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF 183
           KL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPF 179

[Close]

BLAST of Carg23472 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 7.7e-47
Identity = 107/177 (60.45%), Postives = 130/177 (73.45%), Query Frame = 0


Query: 12  ISRSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLIPSVCGFFIIFLHAFTIAGAVSGCA 71
           +S+S  N H +FLLCNYILLG+ASSCIFLT+SLRL PS+ G  +IFL+  TIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 72  M-----AAAATGRWFGVHMVFTVLTAIFQGSVAVLIFTRTSDFLGELKSYVREEDGSVIL 131
           +     +A A+ R +G HMV TVLTAIFQG+V+VLIFTRT DFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 132 KLGGGLSCLIFGLEWVVLVLAFCLKYYFYVEGNGSGEQRSAKVQQFEDSK-WAAAPF 183
           KL GGL  L+F LEW+VLVLAF LKY  Y++ +   +      +Q ED K W + PF
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPF 179

The following BLAST results are available for this feature:

BLAST of Carg23472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937598.1	1.4e-95	100.00	uncharacterized protein LOC111443957 [Cucurbita moschata] >KAG6586182.1 hypothet...	[more]
XP_023537990.1	4.2e-95	99.46	uncharacterized protein LOC111798872 [Cucurbita pepo subsp. pepo] >XP_023537991....	[more]
XP_022965972.1	9.3e-95	98.91	uncharacterized protein LOC111465691 [Cucurbita maxima]	[more]
KAA0051315.1	1.8e-82	90.32	uncharacterized protein E6C27_scaffold55G00280 [Cucumis melo var. makuwa]	[more]
XP_038890643.1	3.1e-82	90.86	uncharacterized protein LOC120080148 [Benincasa hispida]	[more]

BLAST of Carg23472 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGF2	7.0e-96	100.00	uncharacterized protein LOC111443957 OS=Cucurbita moschata OX=3662 GN=LOC1114439...	[more]
A0A6J1HLR5	4.5e-95	98.91	uncharacterized protein LOC111465691 OS=Cucurbita maxima OX=3661 GN=LOC111465691...	[more]
A0A5A7UCF0	8.8e-83	90.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LHB3	3.4e-82	90.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1	[more]
A0A5D3DJ66	1.3e-81	89.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg23472 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16250.1	2.8e-57	67.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02640.1	3.1e-56	65.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G36800.1	7.7e-47	60.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G36710.1	7.7e-47	60.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN-RELATED	coord: 1..182
None	No IPR available	PANTHER	PTHR34124	F16B3.27 PROTEIN-RELATED	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23472-RA	Carg23472-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane