Carg21910 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21910
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhomeobox-leucine zipper protein HOX4-like
LocationCarg_Chr05: 8193673 .. 8194680 (-)
RNA-Seq ExpressionCarg21910
SyntenyCarg21910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCTCTGTTTTTTCTCTCTCTCTCTCTTCGAACTTCTCATACTTCACGTAACTCTCTGTTTCTCTCTCTTTGTTTCTCTCTGCCACAGCTATGGCGGACGGAGCAGTTTACGCGCCACCTTCCTCCGACGTGCTTGATTCCCTCATAATTCCCGGTAAGAATCTTGAATAATTCATGGGTTTTCCGGCAAATTCTGAGCTGACCCATTAATGTTTTTCAGGCGAGTTCATCGGAGAGACCAACGAAGACGAATTACTCGACGGAATATGGCGGCAAGCTTCAAAAAAACGGCGGCTGTCGGTGGATCAAGTTCAATTTCTAGAGAAAAGCTTCGAAGTGGAAAACAAGCTGGAACCAGAGAGAAAAACCCAATTAGCTAAAGAATTGGGTCTTCAACCAAGACAAGTAGCGATCTGGTTCCAAAACAGACGAGCTCGTTGCAAAACAAAGCAGCTAGAAAAGGATTACTTGTCACTCAAAACCAGCTATGATAATCTCAAATCCAGCTACGAAGATCTTGTTCGTGAAAAGGAAGAACTTGAAACAGAGATTCGGAATTTGGAAGAGAGATTAGCGATTGGAGAGAAAGGGAAGCGAATTGATTGTTGTTGGGAGAATCAGAACTCATCAATGGCGGATTCTTCACATGGGTTTGAAACAGAGCTGTCGGATTGTTTCTCGCAGGTTGAAGAAGAGAATTTGAGTGGGGATTTGTTGCCGATTTGTTTCCCCAAATTGGAAAGCTGTTATTATGATGATGATTTAACGGATGGTTGTTGTAATTTAATTGGATTCCAGATTCAAGATCAACCCTTGGGTTTCTGGCCTTGTTGACACAATTTTATCTGGAATTACTCTGTTCTTCAATTATGCTTAAATATACGTATTTTAAAGCTAATAAACTTAAATTATGTGGGTTTTGTCAATATTTTTGCCTAATATATATATATACATTATAAACGCTACATTAATAATTAAAATTTCATAGCTTAACGTGAAATATTTG

mRNA sequence

TCTCCTCTGTTTTTTCTCTCTCTCTCTCTTCGAACTTCTCATACTTCACGTAACTCTCTGTTTCTCTCTCTTTGTTTCTCTCTGCCACAGCTATGGCGGACGGAGCAGTTTACGCGCCACCTTCCTCCGACGTGCTTGATTCCCTCATAATTCCCGGCGAGTTCATCGGAGAGACCAACGAAGACGAATTACTCGACGGAATATGGCGGCAAGCTTCAAAAAAACGGCGGCTGTCGGTGGATCAAGTTCAATTTCTAGAGAAAAGCTTCGAAGTGGAAAACAAGCTGGAACCAGAGAGAAAAACCCAATTAGCTAAAGAATTGGGTCTTCAACCAAGACAAGTAGCGATCTGGTTCCAAAACAGACGAGCTCGTTGCAAAACAAAGCAGCTAGAAAAGGATTACTTGTCACTCAAAACCAGCTATGATAATCTCAAATCCAGCTACGAAGATCTTGTTCGTGAAAAGGAAGAACTTGAAACAGAGATTCGGAATTTGGAAGAGAGATTAGCGATTGGAGAGAAAGGGAAGCGAATTGATTGTTGTTGGGAGAATCAGAACTCATCAATGGCGGATTCTTCACATGGGTTTGAAACAGAGCTGTCGGATTGTTTCTCGCAGGTTGAAGAAGAGAATTTGAGTGGGGATTTGTTGCCGATTTGTTTCCCCAAATTGGAAAGCTGTTATTATGATGATGATTTAACGGATGGTTGTTGTAATTTAATTGGATTCCAGATTCAAGATCAACCCTTGGGTTTCTGGCCTTGTTGACACAATTTTATCTGGAATTACTCTGTTCTTCAATTATGCTTAAATATACGTATTTTAAAGCTAATAAACTTAAATTATGTGGGTTTTGTCAATATTTTTGCCTAATATATATATATACATTATAAACGCTACATTAATAATTAAAATTTCATAGCTTAACGTGAAATATTTG

Coding sequence (CDS)

ATGGCGGACGGAGCAGTTTACGCGCCACCTTCCTCCGACGTGCTTGATTCCCTCATAATTCCCGGCGAGTTCATCGGAGAGACCAACGAAGACGAATTACTCGACGGAATATGGCGGCAAGCTTCAAAAAAACGGCGGCTGTCGGTGGATCAAGTTCAATTTCTAGAGAAAAGCTTCGAAGTGGAAAACAAGCTGGAACCAGAGAGAAAAACCCAATTAGCTAAAGAATTGGGTCTTCAACCAAGACAAGTAGCGATCTGGTTCCAAAACAGACGAGCTCGTTGCAAAACAAAGCAGCTAGAAAAGGATTACTTGTCACTCAAAACCAGCTATGATAATCTCAAATCCAGCTACGAAGATCTTGTTCGTGAAAAGGAAGAACTTGAAACAGAGATTCGGAATTTGGAAGAGAGATTAGCGATTGGAGAGAAAGGGAAGCGAATTGATTGTTGTTGGGAGAATCAGAACTCATCAATGGCGGATTCTTCACATGGGTTTGAAACAGAGCTGTCGGATTGTTTCTCGCAGGTTGAAGAAGAGAATTTGAGTGGGGATTTGTTGCCGATTTGTTTCCCCAAATTGGAAAGCTGTTATTATGATGATGATTTAACGGATGGTTGTTGTAATTTAATTGGATTCCAGATTCAAGATCAACCCTTGGGTTTCTGGCCTTGTTGA

Protein sequence

MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEENLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC
Homology
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BLAST of Carg21910 vs. NCBI nr
Match: KAG7030005.1 (Homeobox-leucine zipper protein HAT5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 1.6e-125
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE
Sbjct: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC
Sbjct: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 225

[Close]
BLAST of Carg21910 vs. NCBI nr
Match: XP_022946027.1 (homeobox-leucine zipper protein HOX4-like [Cucurbita moschata])

HSP 1 Score: 459.5 bits (1181), Expect = 1.6e-125
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE
Sbjct: 36  MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 95

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 96  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 155

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 156 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 215

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC
Sbjct: 216 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 260

[Close]
BLAST of Carg21910 vs. NCBI nr
Match: KAG6599069.1 (Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454.5 bits (1168), Expect = 5.2e-124
Identity = 222/225 (98.67%), Postives = 222/225 (98.67%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDE LDGIWRQASKKRRLS DQVQFLEKSFE
Sbjct: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDEFLDGIWRQASKKRRLSADQVQFLEKSFE 60

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKT YDNLKSSYED
Sbjct: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTRYDNLKSSYED 120

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC
Sbjct: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 225

[Close]
BLAST of Carg21910 vs. NCBI nr
Match: XP_022999761.1 (homeobox-leucine zipper protein HOX4-like [Cucurbita maxima])

HSP 1 Score: 448.0 bits (1151), Expect = 4.9e-122
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDG+WR+ASKKRRLSVDQVQFLEKSFE
Sbjct: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGLWRKASKKRRLSVDQVQFLEKSFE 60

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLA GEKG RIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 121 LVREKEELETEIRNLEERLANGEKGNRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNL+GFQI+DQ LGFWPC
Sbjct: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLVGFQIEDQALGFWPC 225

[Close]
BLAST of Carg21910 vs. NCBI nr
Match: XP_023546047.1 (homeobox-leucine zipper protein ATHB-20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 221/226 (97.79%), Postives = 221/226 (97.79%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRL VDQVQFLEKSFE
Sbjct: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLLVDQVQFLEKSFE 60

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRID-CCWENQNSSMADSSHGFETELSDCFSQVEE 180
           LVREKEELETEIRNLEERLAIGEKGKRID CCWENQNSSMADSSHGFETELSDCFSQVEE
Sbjct: 121 LVREKEELETEIRNLEERLAIGEKGKRIDYCCWENQNSSMADSSHGFETELSDCFSQVEE 180

Query: 181 ENLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           ENLS DLLPICFPKLESC YDDDLTDG CNLIGFQIQDQPLGFWPC
Sbjct: 181 ENLSRDLLPICFPKLESCSYDDDLTDG-CNLIGFQIQDQPLGFWPC 225

[Close]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-29
Identity = 65/97 (67.01%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KKRRL+ +QV  LEKSFE ENKLEPERKTQLAK+LGLQPRQVA+WFQNRRAR KTKQLE+
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERL 140
           DY  LK++YD L S+Y+ +V + ++L +E+ +L E+L
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164

[Close]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.9e-29
Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KKRRLSV+QV+ LE+SFEVENKLEPERK +LA++LGLQPRQVA+WFQNRRAR KTKQLE+
Sbjct: 51  KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLER 110

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADS 162
           DY +L+ SYD+L+  ++ L R+K+ L  EI+ L+ +L   E         E   +S    
Sbjct: 111 DYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPP 170

Query: 163 SHGFETELSDCFSQVEEENLSG 185
           + GF +  SD  + + + + +G
Sbjct: 171 AAGFGSSDSDSSAVLNDVDAAG 192

[Close]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.9e-29
Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KKRRLSV+QV+ LE+SFEVENKLEPERK +LA++LGLQPRQVA+WFQNRRAR KTKQLE+
Sbjct: 51  KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLER 110

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADS 162
           DY +L+ SYD+L+  ++ L R+K+ L  EI+ L+ +L   E         E   +S    
Sbjct: 111 DYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAASDGPP 170

Query: 163 SHGFETELSDCFSQVEEENLSG 185
           + GF +  SD  + + + + +G
Sbjct: 171 AAGFGSSDSDSSAVLNDVDAAG 192

[Close]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-28
Identity = 65/99 (65.66%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 41  ASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQL 100
           + KKRRLS++QV+ LEK+FE+ENKLEPERK +LA+ELGLQPRQVA+WFQNRRAR KTKQL
Sbjct: 60  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 119

Query: 101 EKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERL 140
           EKDY  LKT YD+L+ +++ L R+ E L  EI  L+ +L
Sbjct: 120 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKL 158

[Close]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match: A2YWC0 (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica OX=39946 GN=HOX20 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.5e-28
Identity = 65/120 (54.17%), Postives = 90/120 (75.00%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KKRRLSV+QV+ LE+SFE ENKLEPERK +LA++LGLQPRQVA+WFQNRRAR KTKQLE+
Sbjct: 43  KKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLER 102

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADS 162
           DY +L+ SYD L++ ++ L R+K+ L  EI+ L+ +L   +         E ++ + +D+
Sbjct: 103 DYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDA 162

[Close]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match: A0A6J1G2J1 (homeobox-leucine zipper protein HOX4-like OS=Cucurbita moschata OX=3662 GN=LOC111450239 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 7.9e-126
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE
Sbjct: 36  MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 95

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 96  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 155

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 156 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 215

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC
Sbjct: 216 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 260

[Close]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match: A0A6J1KE08 (homeobox-leucine zipper protein HOX4-like OS=Cucurbita maxima OX=3661 GN=LOC111494013 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.4e-122
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0 

Query: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFE 60
           MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDG+WR+ASKKRRLSVDQVQFLEKSFE
Sbjct: 1   MADGAVYAPPSSDVLDSLIIPGEFIGETNEDELLDGLWRKASKKRRLSVDQVQFLEKSFE 60

Query: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120
           VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED
Sbjct: 61  VENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYED 120

Query: 121 LVREKEELETEIRNLEERLAIGEKGKRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180
           LVREKEELETEIRNLEERLA GEKG RIDCCWENQNSSMADSSHGFETELSDCFSQVEEE
Sbjct: 121 LVREKEELETEIRNLEERLANGEKGNRIDCCWENQNSSMADSSHGFETELSDCFSQVEEE 180

Query: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           NLSGDLLPICFPKLESCYYDDDLTDGCCNL+GFQI+DQ LGFWPC
Sbjct: 181 NLSGDLLPICFPKLESCYYDDDLTDGCCNLVGFQIEDQALGFWPC 225

[Close]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match: A0A5B7ALR0 (Putative homeobox-leucine zipper protein HAT5-like OS=Davidia involucrata OX=16924 GN=Din_027061 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.8e-45
Identity = 121/235 (51.49%), Postives = 144/235 (61.28%), Query Frame = 0 

Query: 27  ETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAI 86
           E N +E  DG + Q  KKRRL   QVQ LEK+FEVENKLEPERK QLAKELGLQPRQVAI
Sbjct: 68  EENGNEDYDGCFHQPEKKRRLLGHQVQCLEKNFEVENKLEPERKVQLAKELGLQPRQVAI 127

Query: 87  WFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGK 146
           WFQNRRAR KTKQLEKDY SLK+S D LK  YE L++EKE L  E+  L ++L + E+ K
Sbjct: 128 WFQNRRARFKTKQLEKDYDSLKSSCDKLKLDYESLLKEKESLRNEVVLLTDKLLLRERDK 187

Query: 147 --------------------------------RIDCCWENQNSS---MADSSHGFETELS 206
                                            + C  E+ +S+   ++DSS+ FE + S
Sbjct: 188 ADSEPFDPIKPMSTEPQKSVPNTVSENLSNVSMVFCKQEDASSAISDVSDSSNVFEADQS 247

Query: 207 DCFSQVEEENLSGDLL-PICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWPC 226
           D FSQ EE+NL   LL P CFPKLE C Y D L   CC+L G  ++DQP  FWPC
Sbjct: 248 D-FSQDEEDNLRRTLLPPPCFPKLEDCSY-DVLPANCCSL-GLPVEDQPSWFWPC 299

[Close]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match: A0A5B7AR57 (Putative homeobox-leucine zipper protein HAT5 OS=Davidia involucrata OX=16924 GN=Din_027064 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.9e-45
Identity = 117/220 (53.18%), Postives = 142/220 (64.55%), Query Frame = 0 

Query: 27  ETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAI 86
           E N +E  D  + Q  KKRRL  DQVQFLE++FEVENKLEPERK QLAKELGLQPRQVAI
Sbjct: 70  EENGNEDYDVCFHQPEKKRRLRADQVQFLERTFEVENKLEPERKVQLAKELGLQPRQVAI 129

Query: 87  WFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGK 146
           WFQNRR+R KTKQLEKDY SLK S+D LK+ Y++L++EKE L+ E+  L ++L + EK K
Sbjct: 130 WFQNRRSRFKTKQLEKDYDSLKASHDKLKADYDNLLKEKENLKNEVLLLTDKLLLREKEK 189

Query: 147 R----------IDCCWEN-----------QNSSMADSSHGFETELSDCFSQVEEENLSGD 206
                      ++   EN           Q  + +  S  F ++ SD  SQ EE+NLS  
Sbjct: 190 ANSEPFDPTEPMNAVSENLSNVPPIVVCKQEDASSAKSDVFYSDQSDS-SQDEEDNLSRT 249

Query: 207 LL-PICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWP 225
           LL P  FPKLE C+Y  DL   CCNL G  I+DQP  FWP
Sbjct: 250 LLRPTRFPKLEECFY-CDLPANCCNL-GLPIEDQPSWFWP 286

[Close]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match: A0A5B7AP49 (Putative homeobox-leucine zipper protein HAT5 OS=Davidia involucrata OX=16924 GN=Din_027067 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 8.9e-45
Identity = 117/220 (53.18%), Postives = 142/220 (64.55%), Query Frame = 0 

Query: 27  ETNEDELLDGIWRQASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAI 86
           E N +E  D  + Q  KKRRL  DQVQFLE++FEVENKLEPERK QLAKELGLQPRQVAI
Sbjct: 24  EENGNEDYDVCFHQPEKKRRLRADQVQFLERTFEVENKLEPERKVQLAKELGLQPRQVAI 83

Query: 87  WFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAIGEKGK 146
           WFQNRR+R KTKQLEKDY SLK S+D LK+ Y++L++EKE L+ E+  L ++L + EK K
Sbjct: 84  WFQNRRSRFKTKQLEKDYDSLKASHDKLKADYDNLLKEKENLKNEVLLLTDKLLLREKEK 143

Query: 147 R----------IDCCWEN-----------QNSSMADSSHGFETELSDCFSQVEEENLSGD 206
                      ++   EN           Q  + +  S  F ++ SD  SQ EE+NLS  
Sbjct: 144 ANSEPFDPTEPMNAVSENLSNVPPIVVCKQEDASSAKSDVFYSDQSDS-SQDEEDNLSRT 203

Query: 207 LL-PICFPKLESCYYDDDLTDGCCNLIGFQIQDQPLGFWP 225
           LL P  FPKLE C+Y  DL   CCNL G  I+DQP  FWP
Sbjct: 204 LLRPTRFPKLEECFY-CDLPANCCNL-GLPIEDQPSWFWP 240

[Close]
BLAST of Carg21910 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-30
Identity = 65/97 (67.01%), Postives = 82/97 (84.54%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KKRRL+ +QV  LEKSFE ENKLEPERKTQLAK+LGLQPRQVA+WFQNRRAR KTKQLE+
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERL 140
           DY  LK++YD L S+Y+ +V + ++L +E+ +L E+L
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164

[Close]
BLAST of Carg21910 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-29
Identity = 65/99 (65.66%), Postives = 82/99 (82.83%), Query Frame = 0 

Query: 41  ASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQL 100
           + KKRRLS++QV+ LEK+FE+ENKLEPERK +LA+ELGLQPRQVA+WFQNRRAR KTKQL
Sbjct: 60  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 119

Query: 101 EKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERL 140
           EKDY  LKT YD+L+ +++ L R+ E L  EI  L+ +L
Sbjct: 120 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKL 158

[Close]
BLAST of Carg21910 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-28
Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 0 

Query: 41  ASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQL 100
           + KKRRL VDQV+ LEK+FE+ENKLEPERKT+LA+ELGLQPRQVA+WFQNRRAR KTKQL
Sbjct: 57  SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQL 116

Query: 101 EKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERL 140
           EKDY  LK  YD+L+ +++ L R+ + L  EI  ++ ++
Sbjct: 117 EKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKV 155

[Close]
BLAST of Carg21910 vs. TAIR 10
Match: AT3G01220.1 (homeobox protein 20 )

HSP 1 Score: 121.3 bits (303), Expect = 9.8e-28
Identity = 79/191 (41.36%), Postives = 106/191 (55.50%), Query Frame = 0 

Query: 43  KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEK 102
           KK+RL ++QV+ LEKSFE+ NKLEPERK QLAK LG+QPRQ+AIWFQNRRAR KT+QLE+
Sbjct: 87  KKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLER 146

Query: 103 DYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEER-LAIGEKGKR-IDCCWENQNSSMA 162
           DY SLK  +++LKS    L+   ++L  E+  L+ +    G   KR  +  W N  S+  
Sbjct: 147 DYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNEGNIVKREAEASWSNNGSTEN 206

Query: 163 DSSHGFETELSDCFSQVEEENLSGDLLPICFPKLESCYYDDD--------LTDGCCNLIG 222
            S    E       + V   N   DL P     + S  +DDD          +  CN+  
Sbjct: 207 SSDINLEMPRETITTHV---NTIKDLFP---SSIRSSAHDDDHHQNHEIVQEESLCNMFN 266

Query: 223 FQIQDQPLGFW 224
              +  P G+W
Sbjct: 267 GIDETTPAGYW 271

[Close]
BLAST of Carg21910 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 121.3 bits (303), Expect = 9.8e-28
Identity = 65/106 (61.32%), Postives = 85/106 (80.19%), Query Frame = 0 

Query: 41  ASKKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQL 100
           A KKRRL V+QV+ LEK+FE++NKLEPERK +LA+ELGLQPRQVAIWFQNRRAR KTKQL
Sbjct: 70  AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQL 129

Query: 101 EKDYLSLKTSYDNLKSSYEDLVREKEELETEIRNLEERLAI-GEKG 146
           E+DY  LK+++D LK + + L R+ + L  +I+ L+ +L + G KG
Sbjct: 130 ERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKG 175

The following BLAST results are available for this feature:
BLAST of Carg21910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030005.11.6e-125100.00Homeobox-leucine zipper protein HAT5 [Cucurbita argyrosperma subsp. argyrosperma... [more]
XP_022946027.11.6e-125100.00homeobox-leucine zipper protein HOX4-like [Cucurbita moschata][more]
KAG6599069.15.2e-12498.67Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. sor... [more]
XP_022999761.14.9e-12296.89homeobox-leucine zipper protein HOX4-like [Cucurbita maxima][more]
XP_023546047.13.9e-11997.79homeobox-leucine zipper protein ATHB-20-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg21910 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q022833.0e-2967.01Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=... [more]
Q9XH373.9e-2950.70Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H... [more]
Q6K4983.9e-2950.70Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
P466684.3e-2865.66Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6... [more]
A2YWC09.5e-2854.17Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
BLAST of Carg21910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2J17.9e-126100.00homeobox-leucine zipper protein HOX4-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1KE082.4e-12296.89homeobox-leucine zipper protein HOX4-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A5B7ALR01.8e-4551.49Putative homeobox-leucine zipper protein HAT5-like OS=Davidia involucrata OX=169... [more]
A0A5B7AR578.9e-4553.18Putative homeobox-leucine zipper protein HAT5 OS=Davidia involucrata OX=16924 GN... [more]
A0A5B7AP498.9e-4553.18Putative homeobox-leucine zipper protein HAT5 OS=Davidia involucrata OX=16924 GN... [more]
BLAST of Carg21910 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01470.12.1e-3067.01homeobox 1 [more]
AT2G22430.13.0e-2965.66homeobox protein 6 [more]
AT4G40060.12.6e-2863.64homeobox protein 16 [more]
AT3G01220.19.8e-2841.36homeobox protein 20 [more]
AT5G65310.19.8e-2861.32homeobox protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..145
NoneNo IPR availableGENE3D1.20.5.400coord: 93..144
e-value: 2.7E-6
score: 29.1
NoneNo IPR availableGENE3D1.10.10.60coord: 46..92
e-value: 1.4E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 27..170
NoneNo IPR availablePANTHERPTHR24326:SF575HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5-LIKEcoord: 27..170
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 69..78
score: 48.35
coord: 78..94
score: 61.56
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 41..102
e-value: 5.8E-19
score: 79.0
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 43..96
e-value: 2.1E-16
score: 59.5
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 38..98
score: 17.264614
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 43..99
e-value: 3.42939E-18
score: 73.4316
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 98..139
e-value: 7.4E-13
score: 48.5
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 73..96
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 34..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21910-RACarg21910-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding