Carg21660 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21660
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ankyrin repeat domain-containing protein 50 isoform 1
Location	Carg_Chr01: 4381898 .. 4385385 (-)
RNA-Seq Expression	Carg21660
Synteny	Carg21660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTCAATCTCTCTCAGAATCAGAGAGGCGTCGAAGGAGGGAGCCTGCTAAAGGGTTTTCCTCTGGATTTTCTAGTTCCAAGGAAAGAGATTGAGATTGAGATTGAGATTCATAGCAATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATGAAATTATTATACTTGACTTATGATCCTTGTTCTTATTTTTGTATTTCTGTGTGTCTGCCTTTTCCCATTGCGGTTTGCAATTACAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGGTTAGCGCAATTTTGCCTCAACCACCCTCTTTCGCTTAGTTCTTGAATAATTAAGTTCTCTTTTCTGTCTTTCTATTTTCATCGTATAATCTTTAATCAGTTTCTTCGAGTCATCATTTTGCCGAATTGGACTGATCAATATTAAGGTAAAACTGGAGAATTTTGTCAGAGTTTGTTCTGTTAATCTGACTCTCACTATTTGTAATTGGACATTGAATCGATTACATACTATTTTAACCCTTCTGTTATACAAAAAAAACGAAGGTATTTTGTTGTTTTGAATAGAAAAAGGGAGGAAATTGACTCTTCAACTTGAAGATATTCATTAGTGTAGGCGCCATTCTCATTCTTCCGAATAGTCTTAAAATCAATCAAAAGGAGACACAGCACAATGAACTGTTCTATTGAATAAATTATGATATGCAAATGAGAGCATCAGGAACTTCAGTTGAGACTAAGAGCATGTCACAGAACATGATGACAAGTTCCTCGTTTCTTTTTCTTCCAAACCAAAACTTGTTAATGCTATTTGATTTTTGAAAATTAAGCTTATAAACATTACTTTCTCTTATGAGTTTCTTTGTATTCTTATCTACCCTTTATAGATGTTTTCAAAATCCAAGCCAATATTTGAAAATGGTAAAAGGGTAGTTTTTACATGTTTGTTTTTGCTTTTGAAATTTGGCTAAAAATTCAAATCTTTTCATAGGAAAGAAGCACAATTTTCCAAAACCAAAAGCTAAATGGTTATCAAATGGGGTTGTAGTACTTTACTTGTGACTTACACATGTATTGACTAAATGTCACTCTCCTTTCTTCTGTAAGTTTGTTAGTTAATTACTGGTAGATGGGATACAGCATGCGGATTATGATGCCTAGTTTCGTACATCTTCTTTGGATGCTTTGGACCCTTGATTACTTATAATTTTATAAATCTTATAGAACTCTCTGCTTTCAAGTTTTTAACTTAGGTCTTCAAGAAAAAAAATGTCATGTTGTCTTGGAGCTAGCCTTTGGTCAACTAAGCCTCTCCGAGGATTAATAGGGTGGGTCATGAACATAATGCTAGAAGGCTCCAACCCTCCAGTTGTTGAAAAGAAAAATGAAAGAAAAAAAAGAGAAAAAGAAGAGGAAGAACAACACCATGTTTGTAGTGTAGCAATACTGTTATCAATTTCAACTGACAAGGGTTCTATTACTTAAGATACGAGCAACCTGTGGGATCATAAGTGATGGTGGCTCATTCCTTTCCTTTTAGTTCGCTGGCTTAAGATTTTTTTTTTTTTTTTTTTTTTTTAATTTAATTTTTGTTGCCACATTCTGTTGTCATATTCTACTTCATAACTTCCTTAGACAGAGATGGATTTTGATCGGGAGATAGGCCTTTTGGATAGAGCTTGCATGCTTCTCTGAGTAGCCAATGTTTCTTAATCTTGGAATGTATTAAGACTAAATTCTCACAAATAGAACATTTAACGGTTGACGTTGTGTTGTAGAATAAAAATATCCTTGTGTTGTAGAATAAAAACATAATTTCATGGAGCTGGATTTTGATCGGCAGATGTAGCTTGGTTGACATTGTGTTGTAGAGCCAGCTTGACATGTAATAAAGCTTTAAGTTTTCATTTGCTCAATCCAGCATGTTTGTCCTACTGTATTGATTATCCTTTTTGCATCTCAAAAGGCCAAATTCCAAATCTGTCATATATGTAAGGACATGTATAATACTGGTTATCTCAAGAGTGATCTCAAGGTTGGTTTACTGATGTAGTTCCCCAGGTGATTGCTTCCCTTATCATTACAGAGATGTATCTGCAAGATTGATATTTTTGTTAATACACCTAGCTTTTAAGACCAAAAGGTGTCGTATATGAATTATATGTTTTGGAGTTCGGCTTGTAGCGCCCTTATTTGGTATAGATTTTATTCCAAGCTACCCATTTGTTAATCCTGTAGGCTGAAACTGTGAAATTATATTGGCTTATTGTGCTCTTTATCCATTTCTTGCTTTGATCTTTTCCCCAGTTTTTGTTATATCCAGGTTTCCCACATTTTCTCATTATAGCTTTTGAGTAATGTAATAGCTTTTGCTTGGTTTCTCTTGTGTGATCCTGAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTGTTACCGGGTGGATGATACAAGCAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGGTAACCTTCTCTTTCTCTTTGAATCTGTGTGTGTGTTTTTTTTTTTTGTAAGCGTATCCCCTAACAATTTTTAATATTAGTTTTGGATTCTTGATATTGACTTGAGTTTGGAGTTTGCAGCCTTGGACAGTGATGATTTGCTCTATCTCAAGGAGCAGATGGAAGCTGAGGAGGATGCAGAGCGCCTCCTCAGACGCACCGAGAAACGAGCCTTTGCAGCATTTAAGATATCCTTTTCATAACAAAACTCATATTTATTCAAATTAAAAGATGAAGTAAATTCCGTATGAACCCTTTGATGCTTGTTTATAGTTGTATCACGAAGGTGCCAATCTGCGGAAGGTTGTAGCGTCAGTGAATTCAGAACACTGCTGTTTAGGCAATAAAGGAGGAGAGGTCTTTCTATCCTCTTTCTCTCTTACCAAATAGTTAAATGTGTGGTTTCAAGCAAATGGTAGTAGTAAAGAGTGTCATTTTTCCCTTAACAAATAATTACAAAGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGTCTCTCTGTCTCTATGCCACTTAACTCATTGCGCTTGAATTTTTCCAAGGTAGCTGGCTGGTTACCTGTGTACATCACCCATATGTGTGATCAATAGTTTGTTAAATGCAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

mRNA sequence

CTGCTCAATCTCTCTCAGAATCAGAGAGGCGTCGAAGGAGGGAGCCTGCTAAAGGGTTTTCCTCTGGATTTTCTAGTTCCAAGGAAAGAGATTGAGATTGAGATTGAGATTCATAGCAATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

Coding sequence (CDS)

ATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

Protein sequence

MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE

Homology

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BLAST of Carg21660 vs. NCBI nr
Match: KAG7037092.1 (hypothetical protein SDJN02_00713 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAASL 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAASL
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAASL 60

Query: 61  ADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVK 120
           ADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVK
Sbjct: 61  ADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVK 120

Query: 121 EKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE 159
           EKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE
Sbjct: 121 EKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE 158

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_022949335.1 (uncharacterized protein LOC111452720 [Cucurbita moschata] >XP_023524672.1 uncharacterized protein LOC111788548 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-70
Identity = 157/195 (80.51%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_022998283.1 (uncharacterized protein LOC111492966 [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69
Identity = 155/195 (79.49%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAEL+NPKHESENEKVKEKKAL SKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELSNPKHESENEKVKEKKALPSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_004137399.1 (uncharacterized protein LOC101214943 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 6.4e-60
Identity = 138/195 (70.77%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ A+L+NPKH+++NEKVKEK  +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLV--KTNKTEGETEAENPVK 180

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BLAST of Carg21660 vs. NCBI nr
Match: XP_038895509.1 (uncharacterized protein LOC120083727 [Benincasa hispida])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 140/195 (71.79%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ A+L+NPKH+ ++EKVKE    S KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDDEKVKESP--SVKTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. ExPASy TrEMBL
Match: A0A6J1GCG6 (uncharacterized protein LOC111452720 OS=Cucurbita moschata OX=3662 GN=LOC111452720 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 157/195 (80.51%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. ExPASy TrEMBL
Match: A0A6J1KGB7 (uncharacterized protein LOC111492966 OS=Cucurbita maxima OX=3661 GN=LOC111492966 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 155/195 (79.49%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAEL+NPKHESENEKVKEKKAL SKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELSNPKHESENEKVKEKKALPSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. ExPASy TrEMBL
Match: A0A0A0LQC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.1e-60
Identity = 138/195 (70.77%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ A+L+NPKH+++NEKVKEK  +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. ExPASy TrEMBL
Match: A0A1S3B0L6 (uncharacterized protein LOC103484557 OS=Cucumis melo OX=3656 GN=LOC103484557 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 138/195 (70.77%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ ++L+NPKH++ N+KVKE   +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. ExPASy TrEMBL
Match: A0A5A7T1G4 (Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00590 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.9e-58
Identity = 136/200 (68.00%), Postives = 147/200 (73.50%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAAS- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGA   
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  -----------------------------------------LADSAPASVPLALRVEPKP 120
                                                    LADSAPASVPLALRVEPKP
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFFHYENFLADSAPASVPLALRVEPKP 120

Query: 121 KSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEA 159
           KSGIRQQDLLKRVVEVK KRPRVS+ ++L+NPKH++ N+KVKE   +  KT+K+EGE EA
Sbjct: 121 KSGIRQQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLV--KTNKTEGETEA 180

[Close]

BLAST of Carg21660 vs. TAIR 10
Match: AT1G73350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 46 Blast hits to 46 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 108/210 (51.43%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EV+EYTNLSDPKDKK GKG  KIDDED+TFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGREVKEYTNLSDPKDKKSGKG--KIDDEDVTFQRMVAKMQEVAGERGGYLHGRGDSDD 60

Query: 61  -------------------------------AASLADSAPASVPLALRVEPKPKSGIRQQ 120
                                          AA+ ADS+PAS+PL LRVEPKPKSGIRQQ
Sbjct: 61  LLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADSSPASIPLPLRVEPKPKSGIRQQ 120

Query: 121 DLLKRVVEVKRKRPRVSSP-----------------AELANPKHESENEKVKEKKALSSK 158
           DLL++VVEVK KRP++S+P                 A++   K + E   V +K      
Sbjct: 121 DLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVLKKPGADRN 180

[Close]

BLAST of Carg21660 vs. TAIR 10
Match: AT1G73350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40
Identity = 108/212 (50.94%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EV+EYTNLSDPKDKK GKG  KIDDED+TFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGREVKEYTNLSDPKDKKSGKG--KIDDEDVTFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AA+ ADS+PAS+PL LRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADSSPASIPLPLRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSP-----------------AELANPKHESENEKVKEKKALS 158
           QQDLL++VVEVK KRP++S+P                 A++   K + E   V +K    
Sbjct: 121 QQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVLKKPGAD 180

[Close]

BLAST of Carg21660 vs. TAIR 10
Match: AT1G73350.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21
Identity = 74/172 (43.02%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 41  MQEVAGERGGYLHGRG-------------------------------------AASLADS 100
           MQEVAGERGGYLHGRG                                     AA+ ADS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADS 60

Query: 101 APASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSP-----------------AE 158
           +PAS+PL LRVEPKPKSGIRQQDLL++VVEVK KRP++S+P                 A+
Sbjct: 61  SPASIPLPLRVEPKPKSGIRQQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAK 120

The following BLAST results are available for this feature:

BLAST of Carg21660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037092.1	2.2e-76	100.00	hypothetical protein SDJN02_00713 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949335.1	5.2e-70	80.51	uncharacterized protein LOC111452720 [Cucurbita moschata] >XP_023524672.1 unchar...	[more]
XP_022998283.1	4.4e-69	79.49	uncharacterized protein LOC111492966 [Cucurbita maxima]	[more]
XP_004137399.1	6.4e-60	70.77	uncharacterized protein LOC101214943 [Cucumis sativus]	[more]
XP_038895509.1	1.4e-59	71.79	uncharacterized protein LOC120083727 [Benincasa hispida]	[more]

BLAST of Carg21660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCG6	2.5e-70	80.51	uncharacterized protein LOC111452720 OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A6J1KGB7	2.1e-69	79.49	uncharacterized protein LOC111492966 OS=Cucurbita maxima OX=3661 GN=LOC111492966...	[more]
A0A0A0LQC3	3.1e-60	70.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1	[more]
A0A1S3B0L6	1.2e-59	70.77	uncharacterized protein LOC103484557 OS=Cucumis melo OX=3656 GN=LOC103484557 PE=...	[more]
A0A5A7T1G4	4.9e-58	68.00	Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuw...	[more]

BLAST of Carg21660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73350.1	1.6e-40	51.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G73350.2	2.7e-40	50.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G73350.3	3.7e-21	43.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..158
None	No IPR available	PANTHER	PTHR37202	ANKYRIN REPEAT PROTEIN	coord: 57..157 coord: 1..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21660-RA	Carg21660-RA	mRNA