Carg21297 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCTCTGCGCAGGTGGCCGAGGAAGATCTTCGACGGCGATTTGAAGCAAATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATGTGGGAAAATGTCCAAATTAATAAAACTAATTGCATGGCTAAATTAATAAAAATAATATTAATTTTACATTTTATCCATTTTATCCATTTTTTTAATAATTATTTAAAAAATAAATTACGTCGTCGAGGTTACACTTCCTCCGTTCGTTTCTTCCTCGGAAATCTGTGCGATTGTGTTTCTCTCTTTGCGTCTCATTCCATGGCGTTTTCTGTGCATTCCAGAGCAAGAAGTACTACAATAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCGTTCTTAACGAGGTAGCATAGGTTTCTGCTTACTTGCTAACTCACTATATTAGCTATCTTTCAAATCTTCAGAAATTCGAGAAATGAACTGGAATTGAATAGCATATGAGAATGCATTTGAATATGGTGAAATATTTAGTAGAAAGAATTTGCCTTCAGATGATAGTTATCATAAAGGATTTAACGATTTAAGACTCAATCATGTTCTTATTGAAACTTGTATGATTATATTTGGGAGCTTGCTGTTTATTTGAAGTCATTCTCATATTCAGGTCGGTTTCTATGATTGGGAATGATTTTGTCATAACTTCTTTTTCCTTTTTTACACGTTATGCAGTTAGGTTCGTAGAAGGCTACCCGATTTCTCTCCATCTAATGTATTGGATTTTGGTGCTGGCACTGGTTCAGCTTTCTGGTAAAAAGTGCTATGCTTGATTTCACAGGCTACTTTATTCATTTATTTGATGTAGAATGCATGGACTGTCATAAGCCTATAATAGCTGATTACATTGTTGTAATGGCCTAGATCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTTCCCCTTTTGGGCTTCCCTTCAAGGCTTTAAAAAGCGTTTTCTATTTCTCTTTCTGCACTTGCTTCTATCTTTCTAATCAGTGTCATGATGGAAAATGTCCATTAGAGAATTCTAGGAAGTATTGTCATTTTGTTCAGTGGTTGGAGAGGACATCTACGCAACGAGCTTACAAGGTTCCTCTTCTTAGCATTCAATCCCCTGTTTCTTAAGCATTCATGTTGTCAGCTGTATGTTATCTTATGCTTAACATGGATATTTGATCATTTTTTAACAAGAGAAGTTGCAATGTTCATGTGTTCAATTTCTCTATTTGCTTTTCGTGACCGACAATTTGCCTTCTCGCTTTTGGATCTTGCACCCATCTCTTATTTTTCTAGTGGCTCGAAATACCTGAGATATACCACTCAGTGTTTAAGTCTGTGTGATAGTGAATGCCTAATGATCATCTAAAGGGGTAGTATCTGAACACATAAAATGAGTATATCAATTTTACTTTGTTATGTCTTGTATGCTTAGTTATGATTAATATTCAACAAGTTTCTTAGACGACGTAGATTCATTCAGTTCTATATGTCGAGTTCTTTAAAAAAGAAAGTAAAAGAGATTTTGTGGGGAAAGCGATTTTCCATCTTTTATTGTAGATCTTGAATGCTTTTATGAAGAATCTGGTTGCACCCTCAGTGTTTAATAAAATATATGGATCTGAGACACCTTCGCATATTATCCTTACTTTGCCCATGGCAGAGGATCTAATAAAGTTGAACACACAAGATATTGTTCCATACCAAGAAGTGGATCCAGATACATATGATTCTGATGTCATGGAAACTGAAACTCTTGATGAAGATGGAGACGAGGGAGGAGAGGAACAAGGAGATTAG ATCGCTCTGCGCAGGTGGCCGAGGAAGATCTTCGACGGCGATTTGAAGCAAATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATAGCAAGAAGTACTACAATAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCTTAGGTTCGTAGAAGGCTACCCGATTTCTCTCCATCTAATGTATTGGATTTTGGTGCTGGCACTGGTTCAGCTTTCTGAGGATCTAATAAAGTTGAACACACAAGATATTGTTCCATACCAAGAAGTGGATCCAGATACATATGATTCTGATGTCATGGAAACTGAAACTCTTGATGAAGATGGAGACGAGGGAGGAGAGGAACAAGGAGATTAG ATCGCTCTGCGCAGGTGGCCGAGGAAGATCTTCGACGGCGATTTGAAGCAAATGGCGACGGTGGGAGCTAGTGCGGTGGTGCAAAATGGTCGAAATAGCAAGAAGTACTACAATAAGGTGCTGAGTCTGTCGGAATCATTCAGTGGTATCAAGGATGTTAATCTGCACCTGGCAGCAACCACTTCAAAGGAACTTGTTGAAGATCCTCTGAAATCAGTAGAGCAATCCAAGCGCTGGAAGATTAAGAGTTGCTATGGTGATATTGGCTTTCAGTACAGAGACGATGAGACGATTGCTTACGTCGCCTCCCTTAGGTTCGTAGAAGGCTACCCGATTTCTCTCCATCTAATGTATTGGATTTTGGTGCTGGCACTGGTTCAGCTTTCTGAGGATCTAATAAAGTTGAACACACAAGATATTGTTCCATACCAAGAAGTGGATCCAGATACATATGATTCTGATGTCATGGAAACTGAAACTCTTGATGAAGATGGAGACGAGGGAGGAGAGGAACAAGGAGATTAG IALRRWPRKIFDGDLKQMATVGASAVVQNGRNSKKYYNKVLSLSESFSGIKDVNLHLAATTSKELVEDPLKSVEQSKRWKIKSCYGDIGFQYRDDETIAYVASLRFVEGYPISLHLMYWILVLALVQLSEDLIKLNTQDIVPYQEVDPDTYDSDVMETETLDEDGDEGGEEQGD Homology
BLAST of Carg21297 vs. NCBI nr
Match: KAG7017034.1 (hypothetical protein SDJN02_22146, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Carg21297 vs. NCBI nr
Match: KAG6579574.1 (hypothetical protein SDJN03_24022, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 169.9 bits (429), Expect = 2.0e-38 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Carg21297 vs. NCBI nr
Match: XP_022957993.1 (methyltransferase-like protein 17, mitochondrial isoform X1 [Cucurbita moschata] >KAG6605595.1 Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.3 bits (316), Expect = 2.5e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. NCBI nr
Match: XP_022957993.1 (methyltransferase-like protein 17, mitochondrial isoform X1 [Cucurbita moschata] >KAG6605595.1 Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 126.3 bits (316), Expect = 2.5e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. NCBI nr
Match: KAG7035505.1 (Methyltransferase-like protein 17, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 126.3 bits (316), Expect = 2.5e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. ExPASy TrEMBL
Match: A0A6J1E517 (methyltransferase-like protein 17, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026114 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. ExPASy TrEMBL
Match: A0A6J1E517 (methyltransferase-like protein 17, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026114 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 7.5e-07 Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. ExPASy TrEMBL
Match: A0A6J1E0U3 (methyltransferase-like protein 17, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026114 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 7.5e-07 Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. ExPASy TrEMBL
Match: A0A6J1H1V3 (methyltransferase-like protein 17, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459357 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 8.2e-06 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 126.3 bits (316), Expect = 1.2e-25 Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Carg21297 vs. ExPASy TrEMBL
Match: A0A6J1H3Q3 (methyltransferase-like protein 17, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459357 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 8.2e-06 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0
HSP 2 Score: 122.9 bits (307), Expect = 1.4e-24 Identity = 61/65 (93.85%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of Carg21297 vs. TAIR 10
Match: AT1G64600.1 (methyltransferases;copper ion binding ) HSP 1 Score: 72.4 bits (176), Expect = 4.0e-13 Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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