Carg20420 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTCAGTATACACAGAGTACTTCTTGTCCTTCTCATGTGTGTTGTGGCACTTTTAGCAGTTAAACCAGAGCAGGCTTGTGGTTTGACAAGCATGGACCTTGCTCTCAGACCAATCCGCCACGTTCTTGAAGATCCAAGGGACAGGAATTCACGACCACGAAACAAGTTCGATCCGAATCGATCGAGCAAAAGACGGGTTCGACGAGGATCGGATCCTATCCACAACAGGTCTTAG ATGGTTTTCAGTATACACAGAGTACTTCTTGTCCTTCTCATGTGTGTTGTGGCACTTTTAGCAGTTAAACCAGAGCAGGCTTGTGGTTTGACAAGCATGGACCTTGCTCTCAGACCAATCCGCCACGTTCTTGAAGATCCAAGGGACAGGAATTCACGACCACGAAACAAGTTCGATCCGAATCGATCGAGCAAAAGACGGGTTCGACGAGGATCGGATCCTATCCACAACAGGTCTTAG ATGGTTTTCAGTATACACAGAGTACTTCTTGTCCTTCTCATGTGTGTTGTGGCACTTTTAGCAGTTAAACCAGAGCAGGCTTGTGGTTTGACAAGCATGGACCTTGCTCTCAGACCAATCCGCCACGTTCTTGAAGATCCAAGGGACAGGAATTCACGACCACGAAACAAGTTCGATCCGAATCGATCGAGCAAAAGACGGGTTCGACGAGGATCGGATCCTATCCACAACAGGTCTTAG MVFSIHRVLLVLLMCVVALLAVKPEQACGLTSMDLALRPIRHVLEDPRDRNSRPRNKFDPNRSSKRRVRRGSDPIHNRS Homology
BLAST of Carg20420 vs. NCBI nr
Match: KAG7036811.1 (hypothetical protein SDJN02_00431, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148.3 bits (373), Expect = 2.8e-32 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg20420 vs. NCBI nr
Match: KAG6607120.1 (hypothetical protein SDJN03_00462, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg20420 vs. NCBI nr
Match: KAA0032271.1 (CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa] >TYK17075.1 CLAVATA3/ESR (CLE)-related protein 45 [Cucumis melo var. makuwa]) HSP 1 Score: 107.1 bits (266), Expect = 7.2e-20 Identity = 68/87 (78.16%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of Carg20420 vs. NCBI nr
Match: KGN61380.1 (hypothetical protein Csa_006322 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19 Identity = 65/87 (74.71%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Carg20420 vs. NCBI nr
Match: KAG7029950.1 (hypothetical protein SDJN02_08294, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104.4 bits (259), Expect = 4.7e-19 Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of Carg20420 vs. ExPASy TrEMBL
Match: A0A5A7SRV2 (CLAVATA3/ESR (CLE)-related protein 45 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00220 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.5e-20 Identity = 68/87 (78.16%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of Carg20420 vs. ExPASy TrEMBL
Match: A0A0A0LHH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G101100 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.9e-20 Identity = 65/87 (74.71%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Carg20420 vs. ExPASy TrEMBL
Match: A0A067GTG0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034426mg PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Carg20420 vs. ExPASy TrEMBL
Match: V4VH78 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10033178mg PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Carg20420 vs. ExPASy TrEMBL
Match: A5APJ5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_010312 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.7e-06 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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