Carg19864 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19864
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	D-aminoacyl-tRNA deacylase
Location	Carg_Chr13: 7138159 .. 7139266 (+)
RNA-Seq Expression	Carg19864
Synteny	Carg19864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGCGTAGCATACCTGCCATTGTTCGCAGCCAGCGTAGGTACGAAGCGAACCACAGTGTTCAGCAACAAAAGGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCTCTTATCTCTCCCTCTTTTTCCCTCTCTATGCATTTCTGAGTCCGCCGGGGTGAGATATGCATTTTCGCAGGTCGATGGCCGCACCGTTTCAGAGATTGGGCCGGGCCTCCTCGTGCTCGTCGGCCTTCATGATTCCGACTCCGAATCCGACGCCGAATACATGTAATCTACTCTTCCCGTCTCTCTTTTCTGTACTAATTCCATGCTCGATGAAAGCATCTTTTGTTATCACAAAGCTACTTCCTCCTTTTCAAATTGGGTTTCAGATGCCGTAAGGTCCTAAATATGAGGTTGTTTCCAAATCAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATAACTATATATACACTCCTTGCTTCCCTATTCCGAAAAGCAAAAGCTTCGGGATGATTTGCTTTACCATTTTCCTTGATATTTGTTGCAGGTAATGCAGAAAAACTACGAGGTTCTATTAGGTAAGTGAAACGAGGTTCTCTTCAAACTTTGTTCCTTGACTGTGAGTTAGATAGAGTCAATCCACTTATTAACTATACCCGGTGGATGGCAACCAGTTAGTCAGTTTACACTGTATGGAATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTCGAGAGGTTCGGTAAATACTACACCCCTGATGCGATAAAAGGTAATCTATGCTCTTCTTCCTTCCCCTAATTTCAAGTTCAGTCTCTTCCAAAGAGTGTTCTGAATGTCGTCTATGTTCCCTTCTCCTGTGGGCAGATGGAGTGTTTGGAGCAATGATGAAGGTAATCTCACTATGCTCAGTTTTGAATTCCAAGTAAGCTCGCTATTAACTGGATTACAAAATTCTGATATTTTGGTCACTTATGTTTGAGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATCGAGTCCCAACCGTCT

mRNA sequence

ATGAACAGCGTAGCATACCTGCCATTGTTCGCAGCCAGCGTAGGTACGAAGCGAACCACAGTGTTCAGCAACAAAAGGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCGATGGCCGCACCGTTTCAGAGATTGGGCCGGGCCTCCTCGTGCTCGTCGGCCTTCATGATTCCGACTCCGAATCCGACGCCGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTTCCAAATCAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTATTAGTTAGTCAGTTTACACTGTATGGAATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTCGAGAGGTTCGGTAAATACTACACCCCTGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATCGAGTCCCAACCGTCT

Coding sequence (CDS)

ATGAACAGCGTAGCATACCTGCCATTGTTCGCAGCCAGCGTAGGTACGAAGCGAACCACAGTGTTCAGCAACAAAAGGAAAATACAGCCGATTAGATCCATGAGAGCTGTTGTTCAGAGAGTCGCCTCTGCAAGCGTCGAGGTCGATGGCCGCACCGTTTCAGAGATTGGGCCGGGCCTCCTCGTGCTCGTCGGCCTTCATGATTCCGACTCCGAATCCGACGCCGAATACATATGCCGTAAGGTCCTAAATATGAGGTTGTTTCCAAATCAGAGTACCGGCAAAGCTTGGGACTTAAACGTAATGCAGAAAAACTACGAGGTTCTATTAGTTAGTCAGTTTACACTGTATGGAATGTTGAAGGGCAACAAGCCGGACTTTCATGTGGCAATGCCTCCCCAAAGAGCCAAACCCTTCTATGCTTCTGTGGTCGAGAGGTTCGGTAAATACTACACCCCTGATGCGATAAAAGATGGAGTGTTTGGAGCAATGATGAAGGTCAATTTGGTGAATGATGGCCCAGTCACAATGCAGATCGAGTCCCAACCGTCT

Protein sequence

MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIESQPS

Homology

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BLAST of Carg19864 vs. NCBI nr
Match: XP_022927221.1 (D-aminoacyl-tRNA deacylase-like [Cucurbita moschata] >KAG6583972.1 D-aminoacyl-tRNA deacylase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

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BLAST of Carg19864 vs. NCBI nr
Match: KAG7019590.1 (D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

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BLAST of Carg19864 vs. NCBI nr
Match: XP_023519775.1 (D-aminoacyl-tRNA deacylase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 180/184 (97.83%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTK TT FSNK+KIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKLTTAFSNKKKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFH+AMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE
Sbjct: 121 KGNKPDFHLAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

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BLAST of Carg19864 vs. NCBI nr
Match: XP_023001753.1 (D-aminoacyl-tRNA deacylase-like [Cucurbita maxima])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 179/184 (97.28%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTKRTT FSNK+KIQPIRSMRAVVQRV SASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTAFSNKKKIQPIRSMRAVVQRVVSASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGA+MKVNLVNDGPVTMQI+
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAVMKVNLVNDGPVTMQID 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

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BLAST of Carg19864 vs. NCBI nr
Match: XP_008442903.1 (PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo var. makuwa])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 170/186 (91.40%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGP 60
           MNSVA LPLFAASV TKRTT+  FSN RK+ PIRSMRAVVQRVASASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDS++DAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IESQPS 185
           I+SQPS
Sbjct: 181 IDSQPS 186

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BLAST of Carg19864 vs. ExPASy Swiss-Prot
Match: Q54EY1 (D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-42
Identity = 79/149 (53.02%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           M+A++QRV S+SV V+G  +SEI  GL+ L+G+   D++ DAEYI RK+LN+RL+ N+  
Sbjct: 1   MKAIIQRVKSSSVTVEGEVISEIKQGLMCLIGIGRDDTKEDAEYITRKILNLRLWKNEDG 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
            K WD +V Q +YE+L VSQFTL+  LKGNK  +H+AM P+ +K FY   +E   K Y P
Sbjct: 61  TKNWDRSVQQMDYEILFVSQFTLFAQLKGNKQSYHLAMAPELSKQFYLDFLENAKKSYKP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIESQ 183
           + IKDG FGAMM V L+NDGPVT+Q++S+
Sbjct: 121 EKIKDGRFGAMMDVQLINDGPVTIQLDSK 149

[Close]

BLAST of Carg19864 vs. ExPASy Swiss-Prot
Match: Q9DD18 (D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 81/148 (54.73%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   DS+ + E++ RK+LN+R+F ++S 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISMEDSQKELEHMVRKILNLRVFEDES- 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  K Y P
Sbjct: 61  GKHWSKSVMDKEYEVLCVSQFTLQCVLKGNKPDFHLAMPTEQAESFYNSFLEQLRKSYRP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIES 182
           + I+DG FGA M+V++ NDGPVT+++ES
Sbjct: 121 ELIRDGKFGAYMQVHIQNDGPVTIELES 147

[Close]

BLAST of Carg19864 vs. ExPASy Swiss-Prot
Match: Q8TEA8 (D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 3.1e-40
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D++ + E++ RK+LN+R+F ++S 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
           GK W  +VM K YE+L VSQFTL  +LKGNKPDFH+AMP ++A+ FY S +E+  K Y P
Sbjct: 61  GKHWSKSVMDKQYEILCVSQFTLQCVLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIES 182
           + IKDG FGA M+V++ NDGPVT+++ES
Sbjct: 121 ELIKDGKFGAYMQVHIQNDGPVTIELES 147

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BLAST of Carg19864 vs. ExPASy Swiss-Prot
Match: Q2T9V8 (D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-40
Identity = 79/148 (53.38%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           M+AVVQRV  ASV V G  +S IG G+ VL+G+   D++ + E++ RK+LN+R+F ++S 
Sbjct: 1   MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDES- 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
           GK W  +VM K YEVL VSQFTL  +LKGNKPDFH+AMP ++A+ FY   +E+  K Y P
Sbjct: 61  GKHWSKSVMDKQYEVLCVSQFTLQCVLKGNKPDFHLAMPAEQAESFYKGFLEQLRKAYRP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIES 182
           + +KDG FGA M+V++ NDGPVT+++ES
Sbjct: 121 ELVKDGKFGAYMQVHIQNDGPVTIELES 147

[Close]

BLAST of Carg19864 vs. ExPASy Swiss-Prot
Match: F1QGC8 (D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 77/151 (50.99%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           M+A++QRV  ASV V    +S IG GL VL+G+   D++ D +Y+ RK+LN+R+F +++ 
Sbjct: 1   MKAIIQRVTRASVTVGEEQISSIGRGLCVLLGISVEDTQKDVDYMVRKILNLRVFEDEN- 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
           G+AW  +VM    EVL VSQFTL  +LKGNKPD+H AMP + A+PFY +++E+  + Y P
Sbjct: 61  GRAWSRSVMDGELEVLCVSQFTLQCLLKGNKPDYHAAMPAELAQPFYNNMLEQLRETYKP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIESQPS 185
           + IKDG FGA M+V + NDGPVT+Q+ES P+
Sbjct: 121 ELIKDGQFGAKMQVLIQNDGPVTIQLESPPA 150

[Close]

BLAST of Carg19864 vs. ExPASy TrEMBL
Match: A0A6J1EH34 (D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.8e-99
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

[Close]

BLAST of Carg19864 vs. ExPASy TrEMBL
Match: A0A6J1KRG2 (D-aminoacyl-tRNA deacylase OS=Cucurbita maxima OX=3661 GN=LOC111495796 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 179/184 (97.28%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPGL 60
           MNSVAYLPLFAASVGTKRTT FSNK+KIQPIRSMRAVVQRV SASVEVDGRTVSEIGPGL
Sbjct: 1   MNSVAYLPLFAASVGTKRTTAFSNKKKIQPIRSMRAVVQRVVSASVEVDGRTVSEIGPGL 60

Query: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120
           LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML
Sbjct: 61  LVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGML 120

Query: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQIE 180
           KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGA+MKVNLVNDGPVTMQI+
Sbjct: 121 KGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAVMKVNLVNDGPVTMQID 180

Query: 181 SQPS 185
           SQPS
Sbjct: 181 SQPS 184

[Close]

BLAST of Carg19864 vs. ExPASy TrEMBL
Match: A0A5A7UU37 (D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002050 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.7e-90
Identity = 170/186 (91.40%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGP 60
           MNSVA LPLFAASV TKRTT+  FSN RK+ PIRSMRAVVQRVASASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDS++DAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IESQPS 185
           I+SQPS
Sbjct: 181 IDSQPS 186

[Close]

BLAST of Carg19864 vs. ExPASy TrEMBL
Match: A0A1S3B6T2 (D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.7e-90
Identity = 170/186 (91.40%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTV--FSNKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGP 60
           MNSVA LPLFAASV TKRTT+  FSN RK+ PIRSMRAVVQRVASASV+VDGRTVSEIGP
Sbjct: 1   MNSVANLPLFAASVSTKRTTLFRFSNNRKLHPIRSMRAVVQRVASASVQVDGRTVSEIGP 60

Query: 61  GLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYG 120
           GLLVLVGLH+SDS++DAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYG
Sbjct: 61  GLLVLVGLHESDSDADAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYG 120

Query: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQ 180
           MLKGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQ
Sbjct: 121 MLKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQ 180

Query: 181 IESQPS 185
           I+SQPS
Sbjct: 181 IDSQPS 186

[Close]

BLAST of Carg19864 vs. ExPASy TrEMBL
Match: A0A0A0LS01 (D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89
Identity = 169/185 (91.35%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MNSVAYLPLFAASVGTKRTTVFS-NKRKIQPIRSMRAVVQRVASASVEVDGRTVSEIGPG 60
           MNSVA LPLFAASV TKRTTVF  +  K++PIRSMRAVVQRVASASV+VDGRTVSEIGPG
Sbjct: 1   MNSVANLPLFAASVSTKRTTVFRFSNNKLRPIRSMRAVVQRVASASVQVDGRTVSEIGPG 60

Query: 61  LLVLVGLHDSDSESDAEYICRKVLNMRLFPNQSTGKAWDLNVMQKNYEVLLVSQFTLYGM 120
           LLVLVGLHDSDS++DAEYICRKVLNMRLFPN+STGKAWDLNVMQKNYEVLLVSQFTLYGM
Sbjct: 61  LLVLVGLHDSDSDTDAEYICRKVLNMRLFPNESTGKAWDLNVMQKNYEVLLVSQFTLYGM 120

Query: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTPDAIKDGVFGAMMKVNLVNDGPVTMQI 180
           LKGNKPDFHVAMPPQRAKPFYASVVERFGK Y PDAIKDGVFGAMMKVNLVNDGPVTMQI
Sbjct: 121 LKGNKPDFHVAMPPQRAKPFYASVVERFGKSYNPDAIKDGVFGAMMKVNLVNDGPVTMQI 180

Query: 181 ESQPS 185
           +SQPS
Sbjct: 181 DSQPS 185

[Close]

BLAST of Carg19864 vs. TAIR 10
Match: AT4G18460.1 (D-Tyr-tRNA(Tyr) deacylase family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68
Identity = 120/151 (79.47%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 34  MRAVVQRVASASVEVDGRTVSEIGPGLLVLVGLHDSDSESDAEYICRKVLNMRLFPNQST 93
           MRAV+QRV+S+SV VDGR VSEIGPGLLVL+G+H+SD+ESDA+YICRKVLNMRLF N++T
Sbjct: 1   MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYICRKVLNMRLFSNETT 60

Query: 94  GKAWDLNVMQKNYEVLLVSQFTLYGMLKGNKPDFHVAMPPQRAKPFYASVVERFGKYYTP 153
           GK WD NVMQ+NY VLLVSQFTLYG LKGNKPDFHVAMPP +AKPFYAS+VE+F K Y P
Sbjct: 61  GKGWDQNVMQRNYGVLLVSQFTLYGFLKGNKPDFHVAMPPDKAKPFYASLVEKFQKAYNP 120

Query: 154 DAIKDGVFGAMMKVNLVNDGPVTMQIESQPS 185
           DA+KDGVFGAMM+VNLVNDGPVTMQ++S  S
Sbjct: 121 DAVKDGVFGAMMQVNLVNDGPVTMQLDSPQS 151

The following BLAST results are available for this feature:

BLAST of Carg19864 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927221.1	1.8e-98	100.00	D-aminoacyl-tRNA deacylase-like [Cucurbita moschata] >KAG6583972.1 D-aminoacyl-t...	[more]
KAG7019590.1	1.8e-98	100.00	D-tyrosyl-tRNA(Tyr) deacylase, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023519775.1	1.7e-96	97.83	D-aminoacyl-tRNA deacylase-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001753.1	2.2e-96	97.28	D-aminoacyl-tRNA deacylase-like [Cucurbita maxima]	[more]
XP_008442903.1	1.2e-89	91.40	PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Cucumis melo] >KAA0057021.1 D-tyrosyl-...	[more]

BLAST of Carg19864 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54EY1	4.3e-42	53.02	D-aminoacyl-tRNA deacylase OS=Dictyostelium discoideum OX=44689 GN=dtd PE=3 SV=1	[more]
Q9DD18	1.4e-40	54.73	D-aminoacyl-tRNA deacylase 1 OS=Mus musculus OX=10090 GN=Dtd1 PE=1 SV=2	[more]
Q8TEA8	3.1e-40	54.05	D-aminoacyl-tRNA deacylase 1 OS=Homo sapiens OX=9606 GN=DTD1 PE=1 SV=2	[more]
Q2T9V8	5.2e-40	53.38	D-aminoacyl-tRNA deacylase 1 OS=Bos taurus OX=9913 GN=DTD1 PE=2 SV=1	[more]
F1QGC8	3.4e-39	50.99	D-aminoacyl-tRNA deacylase 1 OS=Danio rerio OX=7955 GN=dtd1 PE=1 SV=1	[more]

BLAST of Carg19864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EH34	8.8e-99	100.00	D-aminoacyl-tRNA deacylase OS=Cucurbita moschata OX=3662 GN=LOC111434135 PE=3 SV...	[more]
A0A6J1KRG2	1.1e-96	97.28	D-aminoacyl-tRNA deacylase OS=Cucurbita maxima OX=3661 GN=LOC111495796 PE=3 SV=1	[more]
A0A5A7UU37	5.7e-90	91.40	D-aminoacyl-tRNA deacylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B6T2	5.7e-90	91.40	D-aminoacyl-tRNA deacylase OS=Cucumis melo OX=3656 GN=LOC103486664 PE=3 SV=1	[more]
A0A0A0LS01	2.8e-89	91.35	D-aminoacyl-tRNA deacylase OS=Cucumis sativus OX=3659 GN=Csa_1G076620 PE=3 SV=1	[more]

BLAST of Carg19864 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18460.1	1.2e-68	79.47	D-Tyr-tRNA(Tyr) deacylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	GENE3D	3.50.80.10		coord: 34..184 e-value: 1.6E-62 score: 212.2
IPR023509	D-aminoacyl-tRNA deacylase-like superfamily	SUPERFAMILY	69500	DTD-like	coord: 33..180
IPR003732	D-aminoacyl-tRNA deacylase DTD	TIGRFAM	TIGR00256	TIGR00256	coord: 34..181 e-value: 6.7E-43 score: 144.6
IPR003732	D-aminoacyl-tRNA deacylase DTD	PFAM	PF02580	Tyr_Deacylase	coord: 35..180 e-value: 1.1E-49 score: 168.6
IPR003732	D-aminoacyl-tRNA deacylase DTD	PANTHER	PTHR10472	D-TYROSYL-TRNA TYR DEACYLASE	coord: 34..183
IPR003732	D-aminoacyl-tRNA deacylase DTD	HAMAP	MF_00518	Deacylase_Dtd	coord: 34..181 score: 27.660505
IPR003732	D-aminoacyl-tRNA deacylase DTD	CDD	cd00563	Dtyr_deacylase	coord: 34..181 e-value: 3.78496E-75 score: 220.223
None	No IPR available	PANTHER	PTHR10472:SF5	D-AMINOACYL-TRNA DEACYLASE 1	coord: 34..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19864-RA	Carg19864-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051500	D-tyrosyl-tRNA(Tyr) deacylase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0051499	D-aminoacyl-tRNA deacylase activity