Carg19579 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGAGAGAGAGATCTTTGTTCTTCCTTTTCTATTCGATCTTCGATTCCTCTCTCATTTGCCTTACGACAATCAAAATTTCTCGGGTTTTCAGATTGATTTGCGCTCTGCAATTCCGTTTCTTCTTTTTCTTCATTTCGGAATTCAGATTTGACGAAACCGAAATCGCGATTCGTCTTTGTGTGTTTCTGATGTCTGCCTTGGAAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCATAGTGCGAAGAGGCTGCTGTTGAGGACCAGAGATGAGCTCGAGAAATTGGAGCGTCTTGAGTACACGGCCGCCAGTAGCATGGACTCTTCCGACCTTTCCACCTCGATCAAGAGGGATATTACTCAGATCCAGTCGCTCTGTGTTGAGATGGATAGACTCTGGCGATCCGTGGCGGCGAAGTCTCAGCGTGATTTATGGAAAAGGTTTTTGTTCCATTCCCACCTTTGATTGAATTTGTAACTGTATGGTTTCATGTCATTTGATGTTCATCTTCCGGATCGAATTTAGAATCAGATGCCATTTATTTGTTTTATTGAACATTTGGTTATTCATTCTGAATTCCTTGATTTGTTAATTTATTCAAAACTGGTGGATGTCATGTTCTGTAAATCATTGTTGCTTCCATACAAGGAAAAAGAGAAACGAAATAGTATGCTCTTTTGGTTCCAGGATTGAATTTTGTTCGGATTATAATTGACAAACGTTTTACAATATGGGATTTGATTTGATTGTGATTATGGATAATCTTACGACTTATTTCCAATTCGATAAGGCGCAACCTTGATGTGTTTCAACTGGGAATTGTCCTGCAGAAAGGTGGAACAGGTTGCCGAGGAGGCTGATTCTATGAAACAAAGCTTAGACAATTATTTTCTAAGAAACCAGAAGAGAATGATGGAAGCAAAAGAGAGGGCAGAATTGCTTGGAAGAGCTGTATGTACTAATTGTTAGCTCCTTGTGGCTTTTGGTTGCTGAACCCCTTCTTTAATCCTTCATTTTAAGTTGTTTTTGGTCTTGCTTTTGTAGAATGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCCATGAATTCCGTTCGAAATTCATCGCGGATGATAGAGGAAGCTAGTGCGACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAAAGGGACCGGCTGAAGGTATGTGCATAACTGAGTGCATGTAGATTGATCTTTTTTTGGCTATGGCTACCTTCAATTGTTAAAGAAATCTTTGAAAGACTGTGGATGTATAATGTATTCCCTTTAAATGTGAATAGGCTAAGGATTCTATTCTATATTCATAGTCTCTTGTAGCTTTAGGAGATAGCTGCATGTATGGCGCCTTTGAGTTATGATCGTTTTGGAAGTATGAATCATTTTTGGTAGTTTTAGTTTACTCGTGAATTTTTACTCAAGTCTTTGTCCATATTTTGGCGGTTATAGATTCTCCCGGATTAAAAATCACTTTGATTGGCTTAAGGACATGTGCATTATGCTTATTAAGGACTCTAAAAGAATGTTTCTCACGGGGTTTAATAAGTTTTAGCTGGTGAAGTCCGAGTTCGTGTGACCTATGATTAGATTGTGTGGAAAAAAAAATGTCATATAGAAATTTCGGTGTGCGTGACTTGTGTTTTCTGTTTTAGTTGCGAGATTAGCAATTTTATAATGAAGGATTACACCAATATAACTTATGGCTAGCATTGTTTCTTTTAGCGGTGTACATTCAACCCGACAACCCAGACCAATCCAACCAACCCGAACTTTTTGGTTGGTCTAAAAAAATCCCTCAATCCAACCCAACTCGGACCATCTACACCCCTAGTTTCTTTATAAAAAGATGACTTGTGTTTTCTGTTTTAGTGTGTAATTAGTATCTAAGATTGGATAAAGATTCCTTTGTGATATAAATTTCTACTATGCGAGATTAGCAATTTTATAATGAAGGATTACACCAATATAGCTTATGGCTATCATTGTTTCTTTTAGCGGTGTACATTCAACCTGACAATTTGGACCAATCCAACGAACTCGAACTTTTGGGTTGGTCCAAAAAAATCTCTTTAATCCAACCTAACTCGGACCATGTACACCCCTAGTTTCTTTATAAAAGATGACTTGTGTTTTCTGTTTTAGTGGGTAATTAGGATCTAAGATTGGATAAAGATACCTTTGTGATATAAATTTCTAGTCTGCGAGATTAGCAATGTTATAACGAAGGATTACACCAATATAGCTTATGGATATCATTGTTTCTTTTAGCGTTGTACATTCAACCCGACAATCCGGATCAATCCAACCAACTCGAACTTTTAGGTTGGTCCAAAAAAAATCCCTCAACCCAACCCAACCCAATTCGGACCGTGTACACCCATAGTTTCTTTATAAAAGAAACCTTGTGGCCCAACATTCAAAAGGTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTATAGTGCTATGATTATCACTGTTTTCTGTATAAAAGATTTGATTGTTTCTCATAGTGAAACATGCCATTATAGACTACGGTAGCTTGAAATGGCATCCGCAGCTACTTTACTACAGCCTTTATTGCCTTTATTGTCTTCCTCACTTCTCTCTTATGCATCCATTTCTCTCATATTCATTCCCTTATTTTTGTGCATCAGAGAGCACAAAGGAAGGCACTTGATGTCCTTAACACAGTAGGGCTCTCGAATACCGTCCTGAAACTCATCGAGAGACGGCACCGAGTTGATAATTGGATCAAATATGCAGGCATGATCTTAACCATCGTAGCTGTGTTCGTATTTGTTCGATGGGTTCGGTAAGGAAGGTACAAATTGAGGCTGCTTTAATTTGATCTCTCAGTGTTTACACTTCTGGTGGTCTCACTGCCATCTAAAAGACAAACAACTACATACTAAATAGTCTACTTAGAAAGAACAGCTACTACTTTGATGGTGTCCTCTCCTCAGTCGAGCTTCGCTTTGACGGTGTCCTCTCCTCAGTCGAGCTTCGCTTTGAGGGTGTCCTCCCCTCAGTCGAGCTTCGCTTTTGAAGTGCGCAATAACTCAAAAGTTTTCAGGTAATCTTCAGAACTCCCTTCTACAGCTATAGTTCTTGTTCTGGAGATGCAGCTTCTTGTTGATGCTTAGGCTTTTGTTTGTAACATTTCATGATCTTACAGGACTTTTTGGTGCCTTGGTTCTCTTCTCTATAGGTTTTTCTTTGGTAATGAAATTGTCTAATAGATTCCTTAAGTTACATGTTTATTATTGTTCTTTTTTTTAAGATGTCTTTAAAATGTATTCTTAATGCTTAAAGTAATAATAAT GAGAGAGAGAGAGAGAGAGAGATCTTTGTTCTTCCTTTTCTATTCGATCTTCGATTCCTCTCTCATTTGCCTTACGACAATCAAAATTTCTCGGGTTTTCAGATTGATTTGCGCTCTGCAATTCCGTTTCTTCTTTTTCTTCATTTCGGAATTCAGATTTGACGAAACCGAAATCGCGATTCGTCTTTGTGTGTTTCTGATGTCTGCCTTGGAAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCATAGTGCGAAGAGGCTGCTGTTGAGGACCAGAGATGAGCTCGAGAAATTGGAGCGTCTTGAGTACACGGCCGCCAGTAGCATGGACTCTTCCGACCTTTCCACCTCGATCAAGAGGGATATTACTCAGATCCAGTCGCTCTGTGTTGAGATGGATAGACTCTGGCGATCCGTGGCGGCGAAGTCTCAGCGTGATTTATGGAAAAGAAAGGTGGAACAGGTTGCCGAGGAGGCTGATTCTATGAAACAAAGCTTAGACAATTATTTTCTAAGAAACCAGAAGAGAATGATGGAAGCAAAAGAGAGGGCAGAATTGCTTGGAAGAGCTAATGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCCATGAATTCCGTTCGAAATTCATCGCGGATGATAGAGGAAGCTAGTGCGACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAAAGGGACCGGCTGAAGAGAGCACAAAGGAAGGCACTTGATGTCCTTAACACAGTAGGGCTCTCGAATACCGTCCTGAAACTCATCGAGAGACGGCACCGAGTTGATAATTGGATCAAATATGCAGGCATGATCTTAACCATCGTAGCTGTGTTCGTATTTGTTCGATGGGTTCGGTAAGGAAGGTACAAATTGAGGCTGCTTTAATTTGATCTCTCAGTGTTTACACTTCTGGTGGTCTCACTGCCATCTAAAAGACAAACAACTACATACTAAATAGTCTACTTAGAAAGAACAGCTACTACTTTGATGGTGTCCTCTCCTCAGTCGAGCTTCGCTTTGACGGTGTCCTCTCCTCAGTCGAGCTTCGCTTTGAGGGTGTCCTCCCCTCAGTCGAGCTTCGCTTTTGAAGTGCGCAATAACTCAAAAGTTTTCAGGTAATCTTCAGAACTCCCTTCTACAGCTATAGTTCTTGTTCTGGAGATGCAGCTTCTTGTTGATGCTTAGGCTTTTGTTTGTAACATTTCATGATCTTACAGGACTTTTTGGTGCCTTGGTTCTCTTCTCTATAGGTTTTTCTTTGGTAATGAAATTGTCTAATAGATTCCTTAAGTTACATGTTTATTATTGTTCTTTTTTTTAAGATGTCTTTAAAATGTATTCTTAATGCTTAAAGTAATAATAAT ATGTCTGCCTTGGAAGGAGGAGGAGGAGGTACGCTTTCGGAGATATACCATAGTGCGAAGAGGCTGCTGTTGAGGACCAGAGATGAGCTCGAGAAATTGGAGCGTCTTGAGTACACGGCCGCCAGTAGCATGGACTCTTCCGACCTTTCCACCTCGATCAAGAGGGATATTACTCAGATCCAGTCGCTCTGTGTTGAGATGGATAGACTCTGGCGATCCGTGGCGGCGAAGTCTCAGCGTGATTTATGGAAAAGAAAGGTGGAACAGGTTGCCGAGGAGGCTGATTCTATGAAACAAAGCTTAGACAATTATTTTCTAAGAAACCAGAAGAGAATGATGGAAGCAAAAGAGAGGGCAGAATTGCTTGGAAGAGCTAATGGTGACTCTGCTCACATTTTAAGAATTTTTGACGATGAGGCACAAGCCATGAATTCCGTTCGAAATTCATCGCGGATGATAGAGGAAGCTAGTGCGACCGGAGAAGCAATCCTTTTCAAATACTCCGAGCAAAGGGACCGGCTGAAGAGAGCACAAAGGAAGGCACTTGATGTCCTTAACACAGTAGGGCTCTCGAATACCGTCCTGAAACTCATCGAGAGACGGCACCGAGTTGATAATTGGATCAAATATGCAGGCATGATCTTAACCATCGTAGCTGTGTTCGTATTTGTTCGATGGGTTCGGTAA MSALEGGGGGTLSEIYHSAKRLLLRTRDELEKLERLEYTAASSMDSSDLSTSIKRDITQIQSLCVEMDRLWRSVAAKSQRDLWKRKVEQVAEEADSMKQSLDNYFLRNQKRMMEAKERAELLGRANGDSAHILRIFDDEAQAMNSVRNSSRMIEEASATGEAILFKYSEQRDRLKRAQRKALDVLNTVGLSNTVLKLIERRHRVDNWIKYAGMILTIVAVFVFVRWVR Homology
BLAST of Carg19579 vs. NCBI nr
Match: XP_022950332.1 (membrin-11-like [Cucurbita moschata] >KAG7033656.1 Membrin-11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of Carg19579 vs. NCBI nr
Match: KAG6603473.1 (Membrin-11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of Carg19579 vs. NCBI nr
Match: XP_023518923.1 (membrin-11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 412.1 bits (1058), Expect = 3.0e-111 Identity = 215/228 (94.30%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of Carg19579 vs. NCBI nr
Match: XP_022966452.1 (membrin-11-like [Cucurbita maxima]) HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110 Identity = 214/228 (93.86%), Postives = 223/228 (97.81%), Query Frame = 0
BLAST of Carg19579 vs. NCBI nr
Match: XP_022924931.1 (membrin-11-like [Cucurbita moschata]) HSP 1 Score: 404.1 bits (1037), Expect = 8.2e-109 Identity = 214/232 (92.24%), Postives = 223/232 (96.12%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy Swiss-Prot
Match: Q9SJL6 (Membrin-11 OS=Arabidopsis thaliana OX=3702 GN=MEMB11 PE=1 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 5.4e-79 Identity = 148/221 (66.97%), Postives = 190/221 (85.97%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy Swiss-Prot
Match: Q9FK28 (Membrin-12 OS=Arabidopsis thaliana OX=3702 GN=MEMB12 PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.6e-75 Identity = 144/225 (64.00%), Postives = 183/225 (81.33%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy Swiss-Prot
Match: Q9VRL2 (Probable Golgi SNAP receptor complex member 2 OS=Drosophila melanogaster OX=7227 GN=Membrin PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12 Identity = 63/217 (29.03%), Postives = 106/217 (48.85%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy Swiss-Prot
Match: O35166 (Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12 Identity = 57/218 (26.15%), Postives = 112/218 (51.38%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy Swiss-Prot
Match: O35165 (Golgi SNAP receptor complex member 2 OS=Rattus norvegicus OX=10116 GN=Gosr2 PE=1 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11 Identity = 55/218 (25.23%), Postives = 111/218 (50.92%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy TrEMBL
Match: A0A6J1GEH7 (Membrin OS=Cucurbita moschata OX=3662 GN=LOC111453444 PE=3 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 6.8e-117 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy TrEMBL
Match: A0A6J1HN08 (Membrin OS=Cucurbita maxima OX=3661 GN=LOC111466100 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 7.3e-111 Identity = 214/228 (93.86%), Postives = 223/228 (97.81%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy TrEMBL
Match: A0A6J1EAT9 (Membrin OS=Cucurbita moschata OX=3662 GN=LOC111432331 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.0e-109 Identity = 214/232 (92.24%), Postives = 223/232 (96.12%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy TrEMBL
Match: A0A0A0KWL2 (Membrin OS=Cucumis sativus OX=3659 GN=Csa_4G188920 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 3.4e-108 Identity = 212/228 (92.98%), Postives = 219/228 (96.05%), Query Frame = 0
BLAST of Carg19579 vs. ExPASy TrEMBL
Match: A0A1S3B4P2 (Membrin OS=Cucumis melo OX=3656 GN=LOC103485998 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104 Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 0
BLAST of Carg19579 vs. TAIR 10
Match: AT2G36900.1 (membrin 11 ) HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80 Identity = 148/221 (66.97%), Postives = 190/221 (85.97%), Query Frame = 0
BLAST of Carg19579 vs. TAIR 10
Match: AT5G50440.1 (membrin 12 ) HSP 1 Score: 282.7 bits (722), Expect = 2.6e-76 Identity = 144/225 (64.00%), Postives = 183/225 (81.33%), Query Frame = 0
BLAST of Carg19579 vs. TAIR 10
Match: AT2G36900.2 (membrin 11 ) HSP 1 Score: 275.0 bits (702), Expect = 5.4e-74 Identity = 139/204 (68.14%), Postives = 176/204 (86.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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