Carg19561 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19561
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PHD finger protein ING
Location	Carg_Chr03: 3433217 .. 3433788 (-)
RNA-Seq Expression	Carg19561
Synteny	Carg19561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAGATCCGAGACCTTATCTCAAACCTTGATCATGGCGATTGCTCGAACAGGAGTCTACGTCGATGACTATTTGGAATGTATGTAGTATGTTTTCTTTTTGCTTCCACTTTTTCCCTCCTCCTTGTATTCTCTAATCTGCTTCTGCTTTTGTTTCGTTTCAATCTTTGTAGATGCCAGCACATTGCCTGCTGAGCTTCAGAGGCTACTCAACACAATTAGAGAACTCGACGATCGATCTCAGTGTAAAAAATTCGTTTTCTGATTTGATCCACTGTTTAGATCGTCTGTGCTCGGATTCGTTAGTCTGAATTTTTCCTTTTGTTTTGCGTTTTTGTGTTGTATTTGGTTGTAGCGATGATTGATCAGACGAGGCAGCAAACGAAATACTGTCTTGGATTGTCGACACAGAGTTTGAAGAAAGGAATTAATAATAGTAATTCTGAGGATGAGGAGACCGCCTTTGAAAAATTGCGGAAGGATATTGAGGCGAATCAGGATAACGCATTGAGTTTGTGCACTGAGAAGGTTTTGTTGGCACGTCAAGCTGGCGACCTGGTATGGCATACTTAG

mRNA sequence

CCTAGATCCGAGACCTTATCTCAAACCTTGATCATGGCGATTGCTCGAACAGGAGTCTACGTCGATGACTATTTGGAATATGCCAGCACATTGCCTGCTGAGCTTCAGAGGCTACTCAACACAATTAGAGAACTCGACGATCGATCTCAGTCGATGATTGATCAGACGAGGCAGCAAACGAAATACTGTCTTGGATTGTCGACACAGAGTTTGAAGAAAGGAATTAATAATAGTAATTCTGAGGATGAGGAGACCGCCTTTGAAAAATTGCGGAAGGATATTGAGGCGAATCAGGATAACGCATTGAGTTTGTGCACTGAGAAGGTTTTGTTGGCACGTCAAGCTGGCGACCTGGTATGGCATACTTAG

Coding sequence (CDS)

CCTAGATCCGAGACCTTATCTCAAACCTTGATCATGGCGATTGCTCGAACAGGAGTCTACGTCGATGACTATTTGGAATATGCCAGCACATTGCCTGCTGAGCTTCAGAGGCTACTCAACACAATTAGAGAACTCGACGATCGATCTCAGTCGATGATTGATCAGACGAGGCAGCAAACGAAATACTGTCTTGGATTGTCGACACAGAGTTTGAAGAAAGGAATTAATAATAGTAATTCTGAGGATGAGGAGACCGCCTTTGAAAAATTGCGGAAGGATATTGAGGCGAATCAGGATAACGCATTGAGTTTGTGCACTGAGAAGGTTTTGTTGGCACGTCAAGCTGGCGACCTGGTATGGCATACTTAG

Protein sequence

PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLVWHT

Homology

[Close]

BLAST of Carg19561 vs. NCBI nr
Match: KAG7033673.1 (PHD finger protein ING2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237.7 bits (605), Expect = 5.5e-59
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQT 60
           PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQT
Sbjct: 1   PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQT 60

Query: 61  KYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLVW 120
           KYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLVW
Sbjct: 61  KYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLVW 120

Query: 121 HT 123
           HT
Sbjct: 121 HT 122

[Close]

BLAST of Carg19561 vs. NCBI nr
Match: XP_022949615.1 (PHD finger protein ING2-like [Cucurbita moschata] >KAG6603493.1 PHD finger protein ING2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 7.9e-50
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. NCBI nr
Match: XP_023543183.1 (PHD finger protein ING2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGINNSNAEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. NCBI nr
Match: XP_022978265.1 (PHD finger protein ING2-like [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 8.7e-49
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSW 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGINNSNAEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. NCBI nr
Match: KAA0060114.1 (PHD finger protein ING2 [Cucumis melo var. makuwa] >TYK08428.1 PHD finger protein ING2 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 4.8e-47
Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSS 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGYGNSNNEDEESAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. ExPASy Swiss-Prot
Match: B3H615 (PHD finger protein ING2 OS=Arabidopsis thaliana OX=3702 GN=ING2 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 72  KKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Sbjct: 61  KKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLI 111

[Close]

BLAST of Carg19561 vs. ExPASy Swiss-Prot
Match: Q54PN9 (Inhibitor of growth protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=dng1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-04
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 18  GVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINN 77
           G Y+++YL+  STLP+EL R    IRELD R+  ++++  ++ K  L ++T   ++ ++ 
Sbjct: 6   GTYLENYLDSISTLPSELGRNFALIRELDYRTSDLVEKI-EKLKSNLLVTTNGTRRAVH- 65

Query: 78  SNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
                 E   E+  K I+      +    EKV L+ Q  +L+
Sbjct: 66  ------ELTDERASKHIKLEMKQVIEYSDEKVELSNQTYELI 99

[Close]

BLAST of Carg19561 vs. ExPASy TrEMBL
Match: A0A6J1GD88 (PHD finger protein ING OS=Cucurbita moschata OX=3662 GN=LOC111452955 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.8e-50
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. ExPASy TrEMBL
Match: A0A6J1IPK9 (PHD finger protein ING OS=Cucurbita maxima OX=3661 GN=LOC111478300 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.2e-49
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSW 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGINNSNAEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. ExPASy TrEMBL
Match: A0A5A7UYI0 (PHD finger protein ING2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00430 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47
Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSS 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGYGNSNNEDEESAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. ExPASy TrEMBL
Match: A0A1S3B596 (PHD finger protein ING OS=Cucumis melo OX=3656 GN=LOC103485975 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.3e-47
Identity = 102/108 (94.44%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSS 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGYGNSNNEDEESAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. ExPASy TrEMBL
Match: A0A0A0KWF6 (PHD finger protein ING OS=Cucumis sativus OX=3659 GN=Csa_4G192170 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 5.2e-47
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS 
Sbjct: 1   MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSS 60

Query: 72  KKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG  NSN++DEE+AFEKLRKDIEANQDNALSLCTEKVLLARQAGDL+
Sbjct: 61  KKGYGNSNTDDEESAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLI 108

[Close]

BLAST of Carg19561 vs. TAIR 10
Match: AT1G54390.4 (PHD finger protein-related )

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-40
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 72  KKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Sbjct: 61  KKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLI 111

[Close]

BLAST of Carg19561 vs. TAIR 10
Match: AT1G54390.1 (PHD finger protein-related )

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-40
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 72  KKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Sbjct: 61  KKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLI 111

[Close]

BLAST of Carg19561 vs. TAIR 10
Match: AT1G54390.3 (PHD finger protein-related )

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-40
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 72  KKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Sbjct: 61  KKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLI 111

[Close]

BLAST of Carg19561 vs. TAIR 10
Match: AT1G54390.2 (PHD finger protein-related )

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-40
Identity = 84/111 (75.68%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 12  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSL 71
           MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS 
Sbjct: 1   MAIARTGVYVDDYLEYASTFPAELQRLLNTVRELDERSQSLINQTRQQTKYCLGLASQSS 60

Query: 72  KKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV 120
           KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Sbjct: 61  KKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCTEKVLLARQAYDLI 111

[Close]

BLAST of Carg19561 vs. TAIR 10
Match: AT1G54390.5 (PHD finger protein-related )

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 50  QSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCT 109
           +++I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCT
Sbjct: 19  EALINQTRQQTKYCLGLASQSSKKGNGNHYNNGGLDEEETIEKMRKEIESSQENALSLCT 78

Query: 110 EKVLLARQAGDLV 120
           EKVLLARQA DL+
Sbjct: 79  EKVLLARQAYDLI 91

The following BLAST results are available for this feature:

BLAST of Carg19561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033673.1	5.5e-59	100.00	PHD finger protein ING2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949615.1	7.9e-50	99.07	PHD finger protein ING2-like [Cucurbita moschata] >KAG6603493.1 PHD finger prote...	[more]
XP_023543183.1	1.8e-49	98.15	PHD finger protein ING2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022978265.1	8.7e-49	97.22	PHD finger protein ING2-like [Cucurbita maxima]	[more]
KAA0060114.1	4.8e-47	94.44	PHD finger protein ING2 [Cucumis melo var. makuwa] >TYK08428.1 PHD finger protei...	[more]

BLAST of Carg19561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H615	1.1e-38	75.68	PHD finger protein ING2 OS=Arabidopsis thaliana OX=3702 GN=ING2 PE=1 SV=1	[more]
Q54PN9	3.1e-04	29.41	Inhibitor of growth protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=dn...	[more]

BLAST of Carg19561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD88	3.8e-50	99.07	PHD finger protein ING OS=Cucurbita moschata OX=3662 GN=LOC111452955 PE=3 SV=1	[more]
A0A6J1IPK9	4.2e-49	97.22	PHD finger protein ING OS=Cucurbita maxima OX=3661 GN=LOC111478300 PE=3 SV=1	[more]
A0A5A7UYI0	2.3e-47	94.44	PHD finger protein ING2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B596	2.3e-47	94.44	PHD finger protein ING OS=Cucumis melo OX=3656 GN=LOC103485975 PE=3 SV=1	[more]
A0A0A0KWF6	5.2e-47	93.52	PHD finger protein ING OS=Cucumis sativus OX=3659 GN=Csa_4G192170 PE=3 SV=1	[more]

BLAST of Carg19561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54390.4	7.9e-40	75.68	PHD finger protein-related	[more]
AT1G54390.1	7.9e-40	75.68	PHD finger protein-related	[more]
AT1G54390.3	7.9e-40	75.68	PHD finger protein-related	[more]
AT1G54390.2	7.9e-40	75.68	PHD finger protein-related	[more]
AT1G54390.5	1.7e-18	64.38	PHD finger protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..55
None	No IPR available	GENE3D	6.10.140.1740		coord: 16..122 e-value: 3.4E-20 score: 74.4
None	No IPR available	PANTHER	PTHR10333:SF101	PHD FINGER PROTEIN ING2	coord: 13..119
None	No IPR available	CDD	cd17015	ING_plant	coord: 28..119 e-value: 4.66216E-29 score: 99.2891
IPR024610	Inhibitor of growth protein, N-terminal histone-binding	SMART	SM01408	ING_2	coord: 20..121 e-value: 2.7E-15 score: 66.8
IPR024610	Inhibitor of growth protein, N-terminal histone-binding	PFAM	PF12998	ING	coord: 20..121 e-value: 3.7E-14 score: 53.1
IPR028651	ING family	PANTHER	PTHR10333	INHIBITOR OF GROWTH PROTEIN	coord: 13..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19561-RA	Carg19561-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035064	methylated histone binding