Homology
BLAST of Carg19396 vs. NCBI nr
Match:
KAG7011721.1 (RNA-binding protein 28, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1879.0 bits (4866), Expect = 0.0e+00
Identity = 1000/1000 (100.00%), Postives = 1000/1000 (100.00%), Query Frame = 0
Query: 1 NSAVFLQSVESFQAAMGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSD 60
NSAVFLQSVESFQAAMGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSD
Sbjct: 1 NSAVFLQSVESFQAAMGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSD 60
Query: 61 VGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPL 120
VGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPL
Sbjct: 61 VGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPL 120
Query: 121 EQRRSKENQGTASKSKTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTN 180
EQRRSKENQGTASKSKTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTN
Sbjct: 121 EQRRSKENQGTASKSKTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTN 180
Query: 181 EDGDVSKREEQTTLNSEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNA 240
EDGDVSKREEQTTLNSEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNA
Sbjct: 181 EDGDVSKREEQTTLNSEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNA 240
Query: 241 DMAEDVHRQAREVGAVCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTIL 300
DMAEDVHRQAREVGAVCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTIL
Sbjct: 241 DMAEDVHRQAREVGAVCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTIL 300
Query: 301 HQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSS 360
HQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSS
Sbjct: 301 HQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSS 360
Query: 361 DTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEG 420
DTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEG
Sbjct: 361 DTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEG 420
Query: 421 EETENDREGSISSDDLEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRK 480
EETENDREGSISSDDLEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRK
Sbjct: 421 EETENDREGSISSDDLEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRK 480
Query: 481 VLENLIASSAKEALPSLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSIL 540
VLENLIASSAKEALPSLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSIL
Sbjct: 481 VLENLIASSAKEALPSLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSIL 540
Query: 541 KPVDEEDLKRTVYIGNLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKT 600
KPVDEEDLKRTVYIGNLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKT
Sbjct: 541 KPVDEEDLKRTVYIGNLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKT 600
Query: 601 ADAATAAVSSANVASGVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQE 660
ADAATAAVSSANVASGVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQE
Sbjct: 601 ADAATAAVSSANVASGVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQE 660
Query: 661 GIILEGTPAAEGVSASDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQK 720
GIILEGTPAAEGVSASDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQK
Sbjct: 661 GIILEGTPAAEGVSASDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQK 720
Query: 721 LCIEAVTSRATKQKPVIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNN 780
LCIEAVTSRATKQKPVIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNN
Sbjct: 721 LCIEAVTSRATKQKPVIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNN 780
Query: 781 NPETFGPVNRPIVEFAVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNK 840
NPETFGPVNRPIVEFAVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNK
Sbjct: 781 NPETFGPVNRPIVEFAVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNK 840
Query: 841 TNSRKRKATGNNRPVKEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQ 900
TNSRKRKATGNNRPVKEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQ
Sbjct: 841 TNSRKRKATGNNRPVKEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQ 900
Query: 901 KPEGRRSMPEKSSKRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQD 960
KPEGRRSMPEKSSKRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQD
Sbjct: 901 KPEGRRSMPEKSSKRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQD 960
Query: 961 AVDKLDKLIEQYRSKFSQKSSDSADGEKKGSKQVRRWFQS 1001
AVDKLDKLIEQYRSKFSQKSSDSADGEKKGSKQVRRWFQS
Sbjct: 961 AVDKLDKLIEQYRSKFSQKSSDSADGEKKGSKQVRRWFQS 1000
BLAST of Carg19396 vs. NCBI nr
Match:
KAG6572055.1 (Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1825.8 bits (4728), Expect = 0.0e+00
Identity = 973/978 (99.49%), Postives = 976/978 (99.80%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTL+
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLD 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVT+LHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTVLHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIA+SAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIATSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVKTKASQEADVQHKKKAKHQVEQ QRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQ 994
FSQKSSDSADGEKKGSKQ
Sbjct: 961 FSQKSSDSADGEKKGSKQ 978
BLAST of Carg19396 vs. NCBI nr
Match:
XP_022953093.1 (RNA-binding protein 28 [Cucurbita moschata])
HSP 1 Score: 1818.1 bits (4708), Expect = 0.0e+00
Identity = 970/985 (98.48%), Postives = 974/985 (98.88%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSF NSQLEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFANSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNG+KFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGKKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKD SSEDSEKED+SSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDGSSSEDSEKEDVSSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPS VNKEPV DSSKKS DMSDKVSNGPEKLSE KTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSNVNKEPVFDSSKKSSDMSDKVSNGPEKLSESKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESRDRKK+KTRPESGNNTNES KQKPEGRRSMPEKSSKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRDRKKKKTRPESGNNTNESLKQKPEGRRSMPEKSSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQVRRWFQS 1001
FSQKSSDSADGEKKGSKQVRRWFQS
Sbjct: 961 FSQKSSDSADGEKKGSKQVRRWFQS 985
BLAST of Carg19396 vs. NCBI nr
Match:
XP_023511705.1 (RNA-binding protein 28 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1813.9 bits (4697), Expect = 0.0e+00
Identity = 967/985 (98.17%), Postives = 974/985 (98.88%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTA KS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTAFKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQ TNEDGDTSEKEEQTTNEDGDVSKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEK+IKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKQIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSD+DEGSSEDSEKEDISSEIDFEGEAEISRK+LENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDEDEGSSEDSEKEDISSEIDFEGEAEISRKILENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKS DMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDN+DHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNVDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNG+HVSNDMAMEESRDRKKRK RPESGNNTNES KQKPEGRRSMPEKSSKR
Sbjct: 841 KEKNRNENKNGNHVSNDMAMEESRDRKKRKMRPESGNNTNESQKQKPEGRRSMPEKSSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVK KASQEADVQHKKKAKHQV+Q QRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKIKASQEADVQHKKKAKHQVDQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQVRRWFQS 1001
FSQKSSD ADGEKKGSKQVRRWFQS
Sbjct: 961 FSQKSSDPADGEKKGSKQVRRWFQS 985
BLAST of Carg19396 vs. NCBI nr
Match:
XP_022975201.1 (RNA-binding protein 28 isoform X2 [Cucurbita maxima])
HSP 1 Score: 1807.7 bits (4681), Expect = 0.0e+00
Identity = 967/985 (98.17%), Postives = 972/985 (98.68%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQG ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQ TNEDGDTSEKEEQTTNEDGD+SKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQA+EVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKS DMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPK+LHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESR RKKRKTRPESG N NES KQKPEGRRSMPEK SKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESG-NINESQKQKPEGRRSMPEKLSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVKTKASQEADVQHKKKAKHQVEQ QRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQVRRWFQS 1001
FSQKSSD ADGEKKGSKQVRRWFQS
Sbjct: 961 FSQKSSDPADGEKKGSKQVRRWFQS 984
BLAST of Carg19396 vs. ExPASy Swiss-Prot
Match:
Q8CGC6 (RNA-binding protein 28 OS=Mus musculus OX=10090 GN=Rbm28 PE=1 SV=4)
HSP 1 Score: 216.1 bits (549), Expect = 1.8e-54
Identity = 239/795 (30.06%), Postives = 375/795 (47.17%), Query Frame = 0
Query: 231 TVVVGGLLNADMAEDVHRQAREVGAV--CSIVYPLPRKEVEQHGLLRDGCKMDVSAVL-- 290
T+ VG L + ++ + +VG V C +V K G + DV L
Sbjct: 5 TLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 64
Query: 291 FASVKSARAAVTILHQKEMQGGVVWARQLGGEGSKTQ-----------KWKLIVRNLPFQ 350
+ + + VT+ +K + E K + K +LI+RNL F+
Sbjct: 65 ITTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFK 124
Query: 351 AKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRT 410
E ++K F+ G V +V +P D G +GFAFV+F +A A+K N ++ RT
Sbjct: 125 CSEDDLKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 184
Query: 411 IAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDDLEVENAAVHNKSQRSDKDEG 470
+AVDWA+ K Y +A S G + +DR+ S +N V + Q D D+
Sbjct: 185 VAVDWAVAKDKYKDAQHA---SAPGVKKSSDRKPKESGK----KNCRV--EEQVEDSDDE 244
Query: 471 SSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALPSLIDGN--PPSKVNKEPVLD 530
+DS ++ E + ++ ++ + E S D + E +D
Sbjct: 245 EDDDSHDDEEERESTIASPVSVHKRAVKRAAPEESIEEDDSYEDSDLEEGGSSYDEGTVD 304
Query: 531 SSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIGNLPFDINNEEVKQRFSGF 590
S + D D+ +SE K L P D + K TV+I NL FD E + + F
Sbjct: 305 SESSAEDQEDE----DVPVSEKKKRKL-PSDVTEGK-TVFIRNLSFDSEEEALGEVLQQF 364
Query: 591 GEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANV-ASGVGIFLKGRQLKVLNAL 650
G++ VLH T+ +G F +F T +AA +++A++ A G G+ L GRQLKV A+
Sbjct: 365 GDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLKVDLAV 424
Query: 651 DKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSASDMMKRQRLEKKRMTKL 710
+ A + + +K K RNL LA+EG+I GT AAEGVSA+DM KR+R E + KL
Sbjct: 425 TRDEAAKLQTKKVKKPT-GTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKL 484
Query: 711 QSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPV-IRQIKFLKDVKKGKE 770
++ N VS+TRL +HNLPK++ +K+L+KL +EA +K V I++ + ++D+K
Sbjct: 485 KNQNIFVSQTRLCLHNLPKAVDDKQLRKLLLEATRG----EKGVRIKECRVMRDLKGVHG 544
Query: 771 LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEFAVDNVQMLKLRKAKLQ 830
K S G AF EF +H+HAL ALR NNNPE FG RPIVEF++++ + LK+++ ++Q
Sbjct: 545 KMKGQSLGYAFAEFQKHEHALRALRHFNNNPEIFGSQKRPIVEFSLEDRRKLKVKELRIQ 604
Query: 831 ASYQDNTANVPKSLHRNADTNAGDIHSNK----TNSRKRKATGNNRPVKEKNCNENKNGD 890
S Q + S + G K + KA G K K + + +G
Sbjct: 605 RSLQKMESKPVTSKPQKEQKEVGKDKQQKVVQSATQDQSKAPGEQ---KGKAGSTSWSGF 664
Query: 891 HVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKRSAPMDTVKTKAS 950
++ E D KKR R ++ PK + + +K +S P K +
Sbjct: 665 QTKAEVEQVELPDGKKR--RKVLALPSHRGPKIR------LRDKGKVKSLPSRKPKPQMG 724
Query: 951 QEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSKFSQKSSDSADGE 1001
Q + KK+ Q +++AK+NK A + ++L+EQY+ K G
Sbjct: 725 QR---KQKKQQLASSVQAPKRKAKENK------AEARFNQLVEQYKQKLL--------GP 750
HSP 2 Score: 72.8 bits (177), Expect = 2.5e-11
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query: 40 VFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQK 99
+FV LP S + QLEE FS VGPV++CF+VT+KGS RG+G+V F++ ED +A+ K
Sbjct: 6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL--K 65
Query: 100 NGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKSKTNK 140
+ EG KI V A + + + +++N+ S K K
Sbjct: 66 EITTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPK 103
BLAST of Carg19396 vs. ExPASy Swiss-Prot
Match:
Q9NW13 (RNA-binding protein 28 OS=Homo sapiens OX=9606 GN=RBM28 PE=1 SV=3)
HSP 1 Score: 213.8 bits (543), Expect = 9.1e-54
Identity = 261/983 (26.55%), Postives = 414/983 (42.12%), Query Frame = 0
Query: 40 VFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQK 99
+FV LP S + QLEE FS VGPV++CF+VT+KGS RG+G+V F++ ED +A+ K
Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRAL--K 65
Query: 100 NGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKSKTNKEGDTSEREEQTTNEDGDTSK 159
+ EG KI V T +K K +K
Sbjct: 66 EITTFEGCKINV-------------------TVAKKKLR-------------------NK 125
Query: 160 REEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLNSEGRKERHLNAQKLAPLSSYLEDK 219
+E+ NE+ + +KE +
Sbjct: 126 TKEKGKNENSECPKKEPK------------------------------------------ 185
Query: 220 EGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGAVCSIVYPLPRKEVEQHGLLRDGCK 279
Sbjct: 186 ------------------------------------------------------------ 245
Query: 280 MDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPFQAKEK 339
K A+ A +K +LI+RNL F+ E
Sbjct: 246 ----------AKKAKVA-------------------------DKKARLIIRNLSFKCSED 305
Query: 340 EIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVD 399
++K F+ G V +V +P D G +GF FV+F +A A+K N ++ RT+AVD
Sbjct: 306 DLKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVD 365
Query: 400 WAIPKKIY----SSGANAPVDSDEGEETENDREGSISSDDLEVENAAVHNKSQRSDKDEG 459
WA+ K Y S A S E + E+ ++ +D+E E + D+++G
Sbjct: 366 WAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEEN--DDDDDDDDEEDG 425
Query: 460 SSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALPSLIDGNPPSKVNK-EPVLDS 519
+D ++E+ + E +I ++ ++ + + + D ++ E + S
Sbjct: 426 VFDDEDEEEENIESKVTKPVQIQKRAVKRPAPAKSSDHSEEDSDLEESDSIDDGEELAQS 485
Query: 520 SKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIGNLPFDINNEEVKQRFSGFG 579
+ + DK K K + V+E +TV+I NL FD EE+ + FG
Sbjct: 486 DTSTEEQEDKAVQVSNK---KKRKLPSDVNE---GKTVFIRNLSFDSEEEELGELLQQFG 545
Query: 580 EVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVASGV-GIFLKGRQLKVLNALD 639
E+ VLH T+ +G F +F T +AA + +A+ + G+ L GRQLKV A+
Sbjct: 546 ELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLKLDGRQLKVDLAVT 605
Query: 640 KKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSASDMMKRQRLEKKRMTKLQ 699
+ A + + K K RNL LA+EG+I GT AAEGVSA+DM KR+R E + KL+
Sbjct: 606 RDEAAKLQTTKVKKPT-GTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLK 665
Query: 700 SPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPV-IRQIKFLKDVKKGKEL 759
N VSRTRL +HNLPK++ +K+L+KL + A + +K V I++ + ++D+K
Sbjct: 666 DQNIFVSRTRLCLHNLPKAVDDKQLRKLLLSATSG----EKGVRIKECRVMRDLKGVHGN 725
Query: 760 TKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEFAVDNVQMLKLRKAKLQA 819
K S G AF EF EH+HAL ALR++NNNPE FGP+ RPIVEF++++ + LK+++ ++Q
Sbjct: 726 MKGQSLGYAFAEFQEHEHALKALRLINNNPEIFGPLKRPIVEFSLEDRRKLKMKELRIQR 759
Query: 820 SYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPVKEKNCNENKNGDHVSND 879
S Q + S +K G P K++ + K H + +
Sbjct: 786 SLQ-------------------KMRSKPATGEPQK--GQPEPAKDQ---QQKAAQHHTEE 759
Query: 880 MAMEESRDRKKRKTRPESGNNTNESPKQ--KPEGRR-----SMPEKSSKRSAPMDTVKTK 939
+ ++K + +G T +Q P+G++ ++P + D K K
Sbjct: 846 QSKVPPEQKRKAGSTSWTGFQTKAEVEQVELPDGKKRRKVLALPSHRGPKIRLRDKGKVK 759
Query: 940 ----ASQEADVQHKKKAKHQV--EQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSKFSQK 999
+ + K+ K Q+ EQ RK+AK NK + ++L+EQY+ K
Sbjct: 906 PVHPKKPKPQINQWKQEKQQLSSEQVSRKKAKGNKTET------RFNQLVEQYKQKLL-- 759
Query: 1000 SSDSADGEKKGSKQVRR--WFQS 1001
G KG+ +R WF S
Sbjct: 966 ------GPSKGAPLAKRSKWFDS 759
BLAST of Carg19396 vs. ExPASy Swiss-Prot
Match:
P37838 (Nucleolar protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NOP4 PE=1 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.8e-22
Identity = 176/674 (26.11%), Postives = 280/674 (41.54%), Query Frame = 0
Query: 327 LIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKF 386
L VR++P ++++ D FS+ + +V ++ S+GF FV F + D + A+ K
Sbjct: 28 LFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVEDDTKEALAKA 87
Query: 387 NGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEN-DREGSISSDDLEVENAAVHN 446
KF + VD A ++ S + V+ E +E + + DD + E++ +
Sbjct: 88 RKTKFNGHILRVDIA-KRRDRSKKTSEVVEKSTPESSEKITGQNNEDEDDADGEDSMLKG 147
Query: 447 KSQRSDKD-EGSSEDSEK-EDISSEIDFEGEAEISRKVLENLIA---------SSAKEAL 506
K + ++ S D K + I EA I RK L S+ + AL
Sbjct: 148 KPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGFAFVTMKKISNCRIAL 207
Query: 507 PSL----IDGNPPS---KVNKEPVLDSSKKSPDMSDKVSN--GPEKLSEGKTSILKPVDE 566
+ IDG + V K D K P+M+DK N G E E +E
Sbjct: 208 ENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDKDDNESGNEDAEENHDDEEDENEE 267
Query: 567 EDL-----------------KR---TVYIGNLPFDINNEEVKQRFSGFGEVLSFVPVLHQ 626
ED KR +V++ N+P+D E + FS FG V +PV+ +
Sbjct: 268 EDRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDK 327
Query: 627 VTKRPRGTGFLKFKTADAATAAVSSANVASGVGIFL----------KGRQLKVLNAL--- 686
T +GT F+ FK + +A A + + +GR L + L
Sbjct: 328 STGLAKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITPTLVRE 387
Query: 687 ------DKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSASDMMKRQRLEK 746
+K +A KE D RNL L EG ++EG+ A+ ++ +DM R++ K
Sbjct: 388 DAGRMAEKNAAKRKEALGKAPGEKDRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYK 447
Query: 747 KRMTKL-QSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQK----------P 806
R+ +L ++P+ H+S TRL I NLP++M +K L+ L +AV AT+ K
Sbjct: 448 LRVEQLKKNPSLHLSMTRLAIRNLPRAMNDKALKALARKAVVEFATEVKNKERHPLSKEE 507
Query: 807 VIR----QIKFL----------KDVKKG-----------KELTKNYSCGVAFVEFSEHQH 866
+IR + KF+ KD K G K T S G FVEF +H++
Sbjct: 508 IIRSTKEKYKFMGPDEIEAQKKKDKKSGVVKQAKVIMEVKGSTAGRSRGYGFVEFRDHKN 567
Query: 867 ALVALRVLNNNPET-------------------FGPVNRPIVEFAVDNVQMLKLRKAKLQ 885
AL+ LR LN + T G R VEFA++N ++K R+ +L+
Sbjct: 568 ALMGLRWLNCHAVTSDEILEGLNDDEKKQVDNDLGKGRRLCVEFAIENSNVVKRRREQLK 627
BLAST of Carg19396 vs. ExPASy Swiss-Prot
Match:
O74400 (Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC4F6.14 PE=1 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 8.3e-15
Identity = 162/652 (24.85%), Postives = 262/652 (40.18%), Query Frame = 0
Query: 326 KLIVRNLPFQAKE-KEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIK 385
+LI+RNLP+ K+ + ++ FS G V ++ +P + G GFAFV ++ AE A+
Sbjct: 108 RLIIRNLPWSIKKPQHLEPHFSKFGKVREIKIP-TKGGGRMCGFAFVWMKDRKAAEEAMN 167
Query: 386 KFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDS-DEGEETENDREGSISSDDLEVENAAV 445
NG + R IAVDWA+ K + + S +E +E +D SI ++D +
Sbjct: 168 SLNGTEIDGRPIAVDWAVSKDAFEATTLKDASSEEENKEFVSDEGHSIVTEDASAD---- 227
Query: 446 HNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALPSLIDGNPP 505
S+ +E SE ++++ E + EG
Sbjct: 228 ------SESEEEVDGHSEGKELAGESEEEGS----------------------------- 287
Query: 506 SKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPV-DEEDLKRTVYIGNLPFDIN 565
N + V DS S D K SI + D E L+ TV++ NL F+
Sbjct: 288 ---NVDDVEDSGDSSSD---------------KNSINHEIRDNEGLEDTVFVRNLLFECT 347
Query: 566 NEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFK-------------------TADA 625
+E+ F FG + V T R G GF+KF+ +A
Sbjct: 348 EQELYNHFRQFGPLAYAKLVKDPATDRSLGRGFIKFRYEKDCQNCLEMASQLPTQEPTEA 407
Query: 626 ATAAVSSANVASGVG-------IFLKGRQLKVLNALDKKSA---NEKELEKSK---NDNL 685
+ S V G+ L GR LKV +A+ +K A N+K L++ K +
Sbjct: 408 EKRFLPSVLVDEGIDTDSVSSRFLLHGRLLKVTSAVTRKEASDINQKSLQERKQKMGKGV 467
Query: 686 DHRNLNLAQEGIILEGTPAAEGVSASD-MMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNL 745
D R+L L EG I P +S +D ++ Q + +++ ++P H+S RL I N+
Sbjct: 468 DRRHLFLLNEGKIAADHPLFNSLSETDKTLRSQSIAQRKKLLEKNPTLHLSLNRLSIRNI 527
Query: 746 PKSMKEKELQKLCIEAV-----------TSRATKQKPVIRQIKFLKDVKKGKELTK---- 805
+ + K L L +A+ + T+++ + + LK K G L +
Sbjct: 528 SRHIDPKILAMLGRQAIRGFMDDVSKGLRANITEEEENLDKGHRLKRGKSGGVLKQAKVE 587
Query: 806 ------NYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEFAVDNVQMLKLRKA 865
S G F++F H++AL+ALR LN T + +E+A RK
Sbjct: 588 TEKAGAGRSKGFGFMQFISHKYALMALRWLNGREITVKKIIDAEIEWA---------RKH 647
Query: 866 KLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRK-----ATGNNRPVKEKNCNEN 916
K +P+ N D N R R+ A N + VK + +
Sbjct: 648 K-----------IPEPQLPNID----------YNDRPRRLIVEFAIENIQVVKRRQ-EKE 669
BLAST of Carg19396 vs. ExPASy Swiss-Prot
Match:
Q4WJT7 (Multiple RNA-binding domain-containing protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=mrd1 PE=3 SV=1)
HSP 1 Score: 61.2 bits (147), Expect = 7.5e-08
Identity = 101/402 (25.12%), Postives = 161/402 (40.05%), Query Frame = 0
Query: 38 SKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQ 97
++VFV LP +FTN QL FS F +T R GFV F +E A QA
Sbjct: 4 TRVFVSGLPPTFTNDQLRMHFSS------RFQITDAHVLPKRRIGFVGFKSSEAAQQAAS 63
Query: 98 QKNGLSIEGRKITVKHA-------MHRAPLEQRRSKENQGTASKS-KTNKEGDTSEREEQ 157
N ++ KI+V+ A + +A ++ S N TA K+ K ++GD ++++ Q
Sbjct: 64 YFNKTYVKMSKISVEIAKPIDSEPVKKAEKHRKGSTSNDSTAGKALKRKRDGDNTQKDPQ 123
Query: 158 TTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLNSEGRKERHLNAQKL 217
+ + T +GD Q N+ REEQ SE + E H + Q+
Sbjct: 124 LQEYLSVIERPSKTKTWANGDDFLNTIQ--NQPATSELREEQRDDTSE-KVEEHSHKQRK 183
Query: 218 APLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGAVCSIVYPLPRKEVE 277
P D + R +V+ D E+ H +A G V +I P +E
Sbjct: 184 KP----RVDDVPKAAHDREPEPMVL------DKTEEEHERANADGQVEAIP---PTQEEA 243
Query: 278 QHGLLRDGCKMDVSAV--LFASVKSARAAVTILHQKEMQGGVVWARQLGGEGSKTQK--- 337
+ D + S + L + A T + + + G + S K
Sbjct: 244 EPVSDADWLRSKTSRLLGLLDEDEQAEFDSTAQRKPDPSSEPETVSKAGAQHSDDDKAAV 303
Query: 338 -------------------WKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLS 397
+L VRNLP+ A E +++ FS G + ++ V + + S
Sbjct: 304 ESSVEEEEVDTNIEHIRLSSRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTS 363
Query: 398 KGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVDWAIPKKIY 408
KGFA+V++ A A K+ +G+ F R + + A KK Y
Sbjct: 364 KGFAYVQYIEPDAAVQAYKELDGKHFQGRLMHILPATAKKTY 383
BLAST of Carg19396 vs. ExPASy TrEMBL
Match:
A0A6J1GMF1 (RNA-binding protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111455599 PE=4 SV=1)
HSP 1 Score: 1818.1 bits (4708), Expect = 0.0e+00
Identity = 970/985 (98.48%), Postives = 974/985 (98.88%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSF NSQLEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFANSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNG+KFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGKKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKD SSEDSEKED+SSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDGSSSEDSEKEDVSSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPS VNKEPV DSSKKS DMSDKVSNGPEKLSE KTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSNVNKEPVFDSSKKSSDMSDKVSNGPEKLSESKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESRDRKK+KTRPESGNNTNES KQKPEGRRSMPEKSSKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRDRKKKKTRPESGNNTNESLKQKPEGRRSMPEKSSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQVRRWFQS 1001
FSQKSSDSADGEKKGSKQVRRWFQS
Sbjct: 961 FSQKSSDSADGEKKGSKQVRRWFQS 985
BLAST of Carg19396 vs. ExPASy TrEMBL
Match:
A0A6J1IDH9 (RNA-binding protein 28 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1807.7 bits (4681), Expect = 0.0e+00
Identity = 967/985 (98.17%), Postives = 972/985 (98.68%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQG ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQ TNEDGDTSEKEEQTTNEDGD+SKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQA+EVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKS DMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPK+LHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESR RKKRKTRPESG N NES KQKPEGRRSMPEK SKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESG-NINESQKQKPEGRRSMPEKLSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 975
SAPMDTVKTKASQEADVQHKKKAKHQVEQ QRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK 960
Query: 976 FSQKSSDSADGEKKGSKQVRRWFQS 1001
FSQKSSD ADGEKKGSKQVRRWFQS
Sbjct: 961 FSQKSSDPADGEKKGSKQVRRWFQS 984
BLAST of Carg19396 vs. ExPASy TrEMBL
Match:
A0A6J1IG31 (RNA-binding protein 28 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1803.1 bits (4669), Expect = 0.0e+00
Identity = 967/986 (98.07%), Postives = 972/986 (98.58%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQG ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQ TNEDGDTSEKEEQTTNEDGD+SKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQA+EVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKS DMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPK+LHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESR RKKRKTRPESG N NES KQKPEGRRSMPEK SKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESG-NINESQKQKPEGRRSMPEKLSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVE-QHQRKRAKKNKLPVGQDAVDKLDKLIEQYRS 975
SAPMDTVKTKASQEADVQHKKKAKHQVE Q QRKRAKKNKLPVGQDAVDKLDKLIEQYRS
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRS 960
Query: 976 KFSQKSSDSADGEKKGSKQVRRWFQS 1001
KFSQKSSD ADGEKKGSKQVRRWFQS
Sbjct: 961 KFSQKSSDPADGEKKGSKQVRRWFQS 985
BLAST of Carg19396 vs. ExPASy TrEMBL
Match:
A0A6J1IIK5 (RNA-binding protein 28 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE=4 SV=1)
HSP 1 Score: 1713.7 bits (4437), Expect = 0.0e+00
Identity = 916/937 (97.76%), Postives = 923/937 (98.51%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQ+GS
Sbjct: 1 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQG ASKS
Sbjct: 61 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
KTNKEGDTSEREEQTTNEDGDTSKREEQ TNEDGDTSEKEEQTTNEDGD+SKREEQTTLN
Sbjct: 121 KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQA+EVGA
Sbjct: 181 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
Sbjct: 301 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETENDREGSISSDD 435
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETE DREGSISSDD
Sbjct: 361 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD 420
Query: 436 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 495
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP
Sbjct: 421 LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP 480
Query: 496 SLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 555
SLIDGNPPSKVNKEPVLDSSKKS DMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
Sbjct: 481 SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG 540
Query: 556 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 615
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
Sbjct: 541 NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS 600
Query: 616 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 675
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
Sbjct: 601 GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA 660
Query: 676 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 735
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
Sbjct: 661 SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP 720
Query: 736 VIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 795
VIRQIKFLKDVKKGK LTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
Sbjct: 721 VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF 780
Query: 796 AVDNVQMLKLRKAKLQASYQDNTANVPKSLHRNADTNAGDIHSNKTNSRKRKATGNNRPV 855
AVDNVQMLKLRKAKLQASYQDNTANVPK+LHRNADTNAGDIHSNKTNSRKRKATG+NRPV
Sbjct: 781 AVDNVQMLKLRKAKLQASYQDNTANVPKALHRNADTNAGDIHSNKTNSRKRKATGDNRPV 840
Query: 856 KEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKR 915
KEKN NENKNGDHVSNDMAMEESR RKKRKTRPESG N NES KQKPEGRRSMPEK SKR
Sbjct: 841 KEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESG-NINESQKQKPEGRRSMPEKLSKR 900
Query: 916 SAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKK 953
SAPMDTVKTKASQEADVQHKKKAKHQVEQH R R ++
Sbjct: 901 SAPMDTVKTKASQEADVQHKKKAKHQVEQHSRGRGQR 936
BLAST of Carg19396 vs. ExPASy TrEMBL
Match:
A0A1S3BIA6 (RNA-binding protein 28 OS=Cucumis melo OX=3656 GN=LOC103490362 PE=4 SV=1)
HSP 1 Score: 1441.8 bits (3731), Expect = 0.0e+00
Identity = 795/990 (80.30%), Postives = 864/990 (87.27%), Query Frame = 0
Query: 16 MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 75
MGKN+R KDG +KGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS
Sbjct: 1 MGKNRRLKDGADKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGS 60
Query: 76 TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKS 135
TEHRG+GFVQFAVAEDAN+AIQ KNGLS EGRKITVKHAMHRAPLEQRRSKENQ AS
Sbjct: 61 TEHRGFGFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQVAASTL 120
Query: 136 KTNKEGDTSEREEQTTNEDGDTSKREEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLN 195
+ N EGDTSE EEQ TN+D TSKR+EQ +++ DT SKR EQT N
Sbjct: 121 EANVEGDTSEMEEQPTNKDRGTSKRDEQPIDKERDT--------------SKRAEQTISN 180
Query: 196 SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAREVGA 255
SEG KERHL+A+KLA LSSYLEDK+G SGKQRIARTVV+GGLL+ DMAEDVHRQ ++ G
Sbjct: 181 SEG-KERHLSARKLASLSSYLEDKKGHSGKQRIARTVVIGGLLDGDMAEDVHRQVKDAGG 240
Query: 256 VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL 315
VCSIVYPLPRKEVEQHG+LRDGCKMDVSAVLF SVKSARAAVTILHQKEM+GGVVWARQL
Sbjct: 241 VCSIVYPLPRKEVEQHGILRDGCKMDVSAVLFDSVKSARAAVTILHQKEMKGGVVWARQL 300
Query: 316 GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC 375
GGEGSKTQKWK+IVRNLPF+AKEKEIK+TFSSAGFVWDVM+P +SDTGLSKGFAF+KFTC
Sbjct: 301 GGEGSKTQKWKVIVRNLPFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFIKFTC 360
Query: 376 KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSS--GANAPVDSDEGEETENDREGSISS 435
KQDAE+AI+KFNG+KFG+RTIAVDWA+PKKIYSS GANAPVDSD+ ++TE DRE SIS
Sbjct: 361 KQDAESAIQKFNGKKFGQRTIAVDWAVPKKIYSSGGGANAPVDSDDEDQTERDRESSISG 420
Query: 436 DDLEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEA 495
D E EN A H++S E S EDSEKEDISSE+DFEGEAEI+RKVLE LI+SSAKEA
Sbjct: 421 GDFEDENTAGHHES------ESSLEDSEKEDISSEVDFEGEAEIARKVLETLISSSAKEA 480
Query: 496 LPSLIDGNPPSKVNKEPVLDSSKKSPDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVY 555
LPSLIDGNP SKVNK+P DSSKKS DMSDKVSN KLSE KTSILK DE+DLKRTVY
Sbjct: 481 LPSLIDGNPASKVNKDPDFDSSKKSSDMSDKVSNEHGKLSESKTSILKQTDEDDLKRTVY 540
Query: 556 IGNLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANV 615
IGNLPFDI+NEEVKQRFSGFGEVLSFVPVLHQVTKRP+GTGFLKFKT DAA AAVSSAN
Sbjct: 541 IGNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKTTDAANAAVSSANA 600
Query: 616 ASGVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGV 675
ASGVGIFLKGRQLKVLNALDKKSA++KELEKSKNDN DHRNL LAQEG+ILEGTPAAEGV
Sbjct: 601 ASGVGIFLKGRQLKVLNALDKKSAHDKELEKSKNDNHDHRNLYLAQEGLILEGTPAAEGV 660
Query: 676 SASDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQ 735
SASDM KRQRLEKKR TKLQSPNFHVSRTRLVIHNLPKSMKEKEL KLCIEAVTSRATKQ
Sbjct: 661 SASDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMKEKELHKLCIEAVTSRATKQ 720
Query: 736 KPVIRQIKFLKDVKKGKELTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIV 795
KPVIRQIKFLKDVKKGK LTKN+SCGVAFVEFSEH+HALVALRVLNNNPETFGP+NRPIV
Sbjct: 721 KPVIRQIKFLKDVKKGKMLTKNHSCGVAFVEFSEHEHALVALRVLNNNPETFGPINRPIV 780
Query: 796 EFAVDNVQMLKLRKAKLQASYQDN-TANVPKSLHRN--ADTNAGDIHSNKTNSRKRKATG 855
EFA+DNVQ LKLRKAKLQA QDN TANVPK+ RN +DT A D+HSNK NSRKRKA
Sbjct: 781 EFAIDNVQTLKLRKAKLQAWSQDNSTANVPKARLRNDGSDTKARDVHSNKNNSRKRKAID 840
Query: 856 NNRPVKEKNCNENKNGDHVSNDMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPE 915
+N VK +N E++N +HVSND+ M+ESR RKKRKTRP+ G NTNES KQKPEGRR +P+
Sbjct: 841 DNHLVKAQNHIEDENDNHVSNDV-MQESRARKKRKTRPDIG-NTNESQKQKPEGRRLIPQ 900
Query: 916 KSSKRSAPMDTVKTKASQEADVQHKKKAKHQVEQHQRKRAKKNKLPVGQDAVDKLDKLIE 975
KSSKR A MD+ K + SQEAD Q KKK KHQ+EQ QRKR KNK P+G+D VDKLD LIE
Sbjct: 901 KSSKRPASMDSEKIEVSQEADAQQKKKVKHQIEQQQRKRPMKNKEPIGRDIVDKLDVLIE 960
Query: 976 QYRSKFSQKSSDSADGEKKGSKQVRRWFQS 1001
QY+SKF Q+ SD D EKKGSKQVRRWFQS
Sbjct: 961 QYQSKFLQQRSDRTDSEKKGSKQVRRWFQS 967
BLAST of Carg19396 vs. TAIR 10
Match:
AT2G21440.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 790.4 bits (2040), Expect = 1.7e-228
Identity = 503/1033 (48.69%), Postives = 674/1033 (65.25%), Query Frame = 0
Query: 16 MGKNKR-FKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKG 75
MGKNKR KDG EK H + V V LPYS TN+QLEE FS+VGPVRRCF+VT KG
Sbjct: 1 MGKNKRERKDGEEK----SPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKG 60
Query: 76 STEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGTA-- 135
S EHRG+ FV+FA+ ED N+AI+ KNG ++ GR+ITVK A HR L++RR+K +G +
Sbjct: 61 SDEHRGFAFVKFALQEDVNRAIELKNGSTVGGRRITVKQAAHRPSLQERRTKAAEGISVP 120
Query: 136 --SKSKTNKEGDTSEREEQTTNEDGDTSKREEQATNE--------DGDTSEKEEQTTNED 195
S+ +++K+ E +E+ + + K E+ E + K+ + E
Sbjct: 121 DNSQGQSDKDTSIPETDEKVSPPEKKLEKPVERKKVEKPIERKQVEKPVERKKAEKPIEL 180
Query: 196 GDVSKREEQTTLNSEGRK------------ERHLNAQKLAPLSSYLEDKEGSSGKQRIAR 255
V K E+ + + E+ + ++ L L DKE S KQR+AR
Sbjct: 181 KQVEKPFERKQVEKPVERKQVEKPVERKQVEKPIERKRPTKLHVDLPDKETCSDKQRVAR 240
Query: 256 TVVVGGLLNADMAEDVHRQAREVGAVCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASV 315
TV+ GGL NA+MAE VH + +E+G VCS+ YPLP++E++Q+GL +DGC+ + SAVLF SV
Sbjct: 241 TVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSV 300
Query: 316 KSARAAVTILHQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGF 375
KSA AAV LHQ E++G ++WARQLGGEGSK QKWKLI+RNLPFQAK +IK FS+ GF
Sbjct: 301 KSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNLPFQAKPSDIKVVFSAVGF 360
Query: 376 VWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSG 435
VWDV +P + +TGL KGFAFVKFTCK+DA NAIKKFNG FGKR IAVDWA+PK IY+
Sbjct: 361 VWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKFNGHMFGKRPIAVDWAVPKNIYNGA 420
Query: 436 ANAPVDSDEGEETENDREGSISSDDLEVENAAVHNK----SQRSDKDEGSSE----DSEK 495
A+A S +G++ +D + SS DLE + AV + D ++GS++ D+
Sbjct: 421 ADATTASADGDKEGSDGDSENSSVDLEEVDEAVESHPPPGDDTDDDEDGSNKLTESDALD 480
Query: 496 EDISSEIDFEGEAEISRKVLENLIASS-AKEALPSLIDGNPPSKVNKEPVLDSSKKSPDM 555
+D+ ++++FE EA+++RKVL+NL+ASS A P + +K + SS K
Sbjct: 481 KDVGTDMNFEDEADVARKVLKNLLASSKGSTATPE----GETEESDKSKLKSSSTKPVAD 540
Query: 556 SDKVSNGPEKLSEGKTSILKP---VDEEDLKRTVYIGNLPFDINNEEVKQRFSGFGEVLS 615
S VS E L GKT ++ P D +D +RT++I NLPFD+ EEVKQRF+ FGEV S
Sbjct: 541 SSGVS---EPLKSGKTKVVAPKETQDNDDFERTLFIRNLPFDVTKEEVKQRFTVFGEVES 600
Query: 616 FVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVASGVGIFLKGRQLKVLNALDKKSAN 675
VLH+VTKRP GT F+KFKTADA+ AA+S+A+ ASGVG+ LKGRQL V+ A+ KK+A
Sbjct: 601 LSLVLHKVTKRPEGTAFVKFKTADASVAAISAADTASGVGVLLKGRQLNVMRAVGKKAAK 660
Query: 676 EKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSASDMMKRQRLEKKRMTKLQSPNFH 735
+ EL+K++ N+DHRNL LA+EG IL+ TPAAEGVSA DM KR+RL + +M LQSPNFH
Sbjct: 661 DIELKKTEEKNVDHRNLYLAKEGQILDDTPAAEGVSAEDMDKRRRLHENKMKMLQSPNFH 720
Query: 736 VSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKPVIRQIKFLKDVKKGKELTKNYSC 795
VSRTRLVI+NLPKSM K+L +L ++AVTSRATKQKP IRQIKFL++ KKGK TKNYS
Sbjct: 721 VSRTRLVIYNLPKSMNPKQLNRLLVDAVTSRATKQKPCIRQIKFLQNEKKGKVDTKNYSR 780
Query: 796 GVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEFAVDNVQMLKLRKAKLQASYQDNT 855
GVAFVEF+EH+HALVALRVLNNNPETFGP +RP++EFAVDNVQ LK+R+AK Q Q
Sbjct: 781 GVAFVEFTEHEHALVALRVLNNNPETFGPQHRPVIEFAVDNVQKLKIREAKQQQFQQREK 840
Query: 856 ANVPKSLHRNADTNAGDIHSNKTNSRKRKA-TGNNRPVKEKNCNENKNG------DHVSN 915
N N + A D N KRK G+N +++N K G + +
Sbjct: 841 HNESDQQQANGEAQAPD------NKYKRKTREGDNTGPRKENAARFKKGPREESKEEAKS 900
Query: 916 DMAMEESRDRKKRKTRPESGNNTNESPKQKPEGRRSMPEKSSKRSAPMDTVKTKASQEAD 975
++A++++ KKR R T E P +G+ ++++++ P K S++
Sbjct: 901 NIAVKDNAAEKKRPIR------TQEKPSSNKKGQLMRQKETTEKPDP------KISKDLS 960
Query: 976 VQHKKK-AKHQVEQH---QRKRAKKNKLPVGQDAVDKLDKLIEQYRSKFSQKSSDSADGE 1001
K+K + + E++ QRKR K+ + G + VDKLD LIE+YRSKFSQ S+ + +
Sbjct: 961 EPRKRKFGEDRGEENRNGQRKRKKQGQGQGGAEVVDKLDLLIEKYRSKFSQSSAKTGP-Q 1003
BLAST of Carg19396 vs. TAIR 10
Match:
AT5G18810.1 (SC35-like splicing factor 28 )
HSP 1 Score: 62.4 bits (150), Expect = 2.4e-09
Identity = 28/75 (37.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 327 LIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKF 386
L++RNLP A+ +++D+F G + D+ +P + TG +GF FVK+ +DA A+K+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 387 NGQKFGKRTIAVDWA 402
N + G R IA+ +A
Sbjct: 109 NHKVIGGREIAIVFA 123
BLAST of Carg19396 vs. TAIR 10
Match:
AT4G20030.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 326 KLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKK 385
K++VRNLPF E +K FS+ G + +V + SKG+AF++FT + DA AI+
Sbjct: 41 KIMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIET 100
Query: 386 FNGQKFGKRTIAVDWAIPKKIYSSG----ANAPVDSDEGEETEND 427
+ + + R I +D A P K G + P SDE EE ND
Sbjct: 101 MDRRMYNGRMIYIDIAKPGKRDFQGLPRTSGPPEKSDEPEEAAND 145
BLAST of Carg19396 vs. TAIR 10
Match:
AT5G06210.1 (RNA binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09
Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = 0
Query: 326 KLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKK 385
KL + L F E+ + + FS G V + + + SKGF FV F +A+ A+ +
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 386 FNGQKFGKRTIAVDWAIPKKIYSSGANAPV 416
FNGQ+ RTI VD+A K+ G P+
Sbjct: 95 FNGQQLNGRTIFVDYAKAKQSLGGGGGYPI 124
BLAST of Carg19396 vs. TAIR 10
Match:
AT2G36660.1 (poly(A) binding protein 7 )
HSP 1 Score: 60.8 bits (146), Expect = 7.0e-09
Identity = 90/371 (24.26%), Postives = 140/371 (37.74%), Query Frame = 0
Query: 40 VFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQKGSTEHRGYGFVQFAVAEDANQAIQQK 99
VFVKNLP S TN+ L++ F G + C + T + + RGYGFVQF + A+ AIQ
Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDG-KSRGYGFVQFEQEDAAHAAIQTL 173
Query: 100 NGLSIEGRKITVKHAMHRAPLEQRRSKENQGTASKSKTNKEGDTSEREEQTTNEDGDTSK 159
N + ++I V M + D K
Sbjct: 174 NSTIVADKEIYVGKFMKKT-------------------------------------DRVK 233
Query: 160 REEQATNEDGDTSEKEEQTTNEDGDVSKREEQTTLNSEGRKERHLNAQKLAPLSSYLEDK 219
EE+ TN N D DVS+ + +E+ K+ L+
Sbjct: 234 PEEKYTN---------LYMKNLDADVSE---------DLLREKFAEFGKIVSLAI----- 293
Query: 220 EGSSGKQRIARTVVVGGLLNADMAEDVHRQAREV-----GAVCSIVYPLPRKEVEQHGLL 279
+ + R+ R +N D ED R A V G+ C V +K+ E+ LL
Sbjct: 294 --AKDENRLCRGY---AFVNFDNPEDARRAAETVNGTKFGSKCLYV-GRAQKKAEREQLL 353
Query: 280 RDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQLGGEGSKTQKWKLIVRNLPF 339
R+ K H+++ V + V+N+
Sbjct: 354 REQFKEK-------------------HEEQKMIAKV--------------SNIYVKNVNV 383
Query: 340 QAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTCKQDAENAIKKFNGQKFGKR 399
E+E++ FS G + + + G SKGF FV F+ ++A +A+K F+GQ F +
Sbjct: 414 AVTEEELRKHFSQCGTITSTKL-MCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGK 383
Query: 400 TIAVDWAIPKK 406
+ V A K+
Sbjct: 474 PLYVAIAQKKE 383
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7011721.1 | 0.0e+00 | 100.00 | RNA-binding protein 28, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6572055.1 | 0.0e+00 | 99.49 | Chromatin remodeling protein SHL, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
XP_022953093.1 | 0.0e+00 | 98.48 | RNA-binding protein 28 [Cucurbita moschata] | [more] |
XP_023511705.1 | 0.0e+00 | 98.17 | RNA-binding protein 28 [Cucurbita pepo subsp. pepo] | [more] |
XP_022975201.1 | 0.0e+00 | 98.17 | RNA-binding protein 28 isoform X2 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q8CGC6 | 1.8e-54 | 30.06 | RNA-binding protein 28 OS=Mus musculus OX=10090 GN=Rbm28 PE=1 SV=4 | [more] |
Q9NW13 | 9.1e-54 | 26.55 | RNA-binding protein 28 OS=Homo sapiens OX=9606 GN=RBM28 PE=1 SV=3 | [more] |
P37838 | 1.8e-22 | 26.11 | Nucleolar protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=... | [more] |
O74400 | 8.3e-15 | 24.85 | Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe (strain... | [more] |
Q4WJT7 | 7.5e-08 | 25.12 | Multiple RNA-binding domain-containing protein 1 OS=Neosartorya fumigata (strain... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GMF1 | 0.0e+00 | 98.48 | RNA-binding protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111455599 PE=4 SV=1 | [more] |
A0A6J1IDH9 | 0.0e+00 | 98.17 | RNA-binding protein 28 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |
A0A6J1IG31 | 0.0e+00 | 98.07 | RNA-binding protein 28 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |
A0A6J1IIK5 | 0.0e+00 | 97.76 | RNA-binding protein 28 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111474290 PE... | [more] |
A0A1S3BIA6 | 0.0e+00 | 80.30 | RNA-binding protein 28 OS=Cucumis melo OX=3656 GN=LOC103490362 PE=4 SV=1 | [more] |