Carg18761 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18761
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Location	Carg_Chr08: 3994527 .. 3998645 (-)
RNA-Seq Expression	Carg18761
Synteny	Carg18761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCTTTTGTTGCCCTCGGCAGAGGAGGGAAGTCCAAGTTCGACAAGCACAGTTCTGAGTTCGAACTTCTAATCGCGTCGTCTCTTTCCGCTCTGCATGATCTCTCCTGCTTTTGCCGATGGAGTTTAGAAATTTGTCAAGCGATTTAGATGATTCTGTGTTCGAATTCACACTTGCTGAGGTAAGTTCTTATTATGTTAAGCTCGAATTCATGTCTTTTAATCAACGTTTCCGAGTTTAGCTTCACTGTTCGAGTTATGCGCAGAAATTGCTTTCAGCATTTTCTGATTTGAGATTACCGGTTTCGATTTTGTATTCTTATTATGTTAAGCTCGAATTCATGTCTTTCAATCAATGCTTCCGAGTTTAGCTTCACTGTTCGAGTTATGCGCAGAAATTCGGTTCAGCATTTTCTGATTTGAGATTACCGATTTCGATTTTGCATTCTATTTCGTTGTGTCGTTAATTTTTCAGATTGTGGAAATGGACAGTATCTTAAGGGAATCTGGAGATCAAACACTTGGTCAACAGTTTTTCCAAGACGTCGCTCTTCATTTCAGGTAATAGAGCTGTGATTGCTTTTCGAACCAGTATTTGTGCAATCGATCGTCGTATCTTTATTTTCATGCTGCTTCTTTCTTGCAGTTGCTCCCCATGGCGCGCTGAAAAATCTCCCGTCACTGCGGAACAGGTCTTTGATTTTTCTCTTATCCACTTTCTACTTTGTTCGTTGTTTTACTGATTTTTGGTAGTTCTTATGTGCCATAGGTGCAAAGCTGGTTTGAGAATCGGAAAAAGGAATCGCGAAGTAGTAGTACTAGTAGTAGCAAAAAAGCTCGCCCTCCACCTCCACCTCCACCTCCACTGTCTTCTCCGCCTCCGACTCCGCCGCCGAAACTTTTGCTTTATCATTCGGATAGTGCTTTTTTAACTGACATACCTGCATCTGAACCACCTGATAGTTTTCCTGAATTCAAAGGTAATTTCCGCACCTCTGCCTTCCCGAATTTAGAAATGCTATCTGAAATTCTTCTCTATAATGTCAATGTAGCAAGCAATTGCTGCGGTTATTGATGTATGCGTTGTTTTCTATCTTCTGGCTCTACAATGGTTTTCGTTACTTTTCTTGCACGACGGTAGACTGGGAAAGGGAAGGTCTGCACAGTAATTGATAAAACTCATTCGTGCCTAGAATTATTCTAGTTGCTGCATGCACAATGATTGGTAATTTCTTTGTGCTTAGACTATCAAGCCTTCTATAAGAGATTTTAAGAGGAAAAATCCGTAGGTTATGAAACTTAAAAACTCACAAATCATCGTTCCGACTGCATGTTAGTCAAAGCTTAGCAGACAAGCAGGGATCGCTGTAATTCTGGTTAGTGCTTCTTGCATTACCGAGAATTTCTAGTATTTCTGCATTCTGCTGCTTGTAGTATTGGTGTAGAACAACAAACTTGGGATTTCTCGTCGACAAAGCCTAACTCTGACAGTTTCAACTTTCAATTTGCCGTGTTGATGCCACATTCCTGTGATCGACCCTTTCTTAAATGATGGTATCGAGGTTGAATCTGAAAGTCCAAGTTCAAATCACAGCATGCACTTTGATCTGAAAACTGCAGTTTTTCCTTTGCATAATTTGAGCTTTGGCCAAGATACTATAATTTGCAGTTCTGTAGTAATTTTCCCTCATATGAGTGTTGGTAAACTTGAAATCTGTCCAGTTCCATTTTGAACTATTAACTTTTTGTAACATCTTCACATGAAAATTTTATGCAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTGAGAAAAATTTAGAGCGGAATACAAAACTGTTACATGTGCATTATCTATGACGGAATCATATGCTCATATTCATACAAGCACATTTTCATGGATTATAAGCTGTAATTAACACCTTGAATCCATTGGAATACATTAGGTAGATGATAACGCTTTCTAATCAGATATAGTGTCTCGAGTTTGCTACCATAATCCTAGCATTATACAAGTGCCTTGAGTTTATTTTCATTTCACACTTGGGAAAAATAGTGGAAGACAAATCTCTAAACAAACGATGCTAACTTCCCAGCATCTATTACTTGCAGTCATTCAGCACTTCACACTCTTGAACTTGATAATGATGTGCCGAATATTGCCATTCATTTCAGATCCTTTAAGAACGCACTGCAAAAGTCAGTATGTAGATTACTGAGCCCCATGGAGTTAGAACAACGTTCATAAGTAGTTGAAAGTTGACCGTAATGGTATTTGCATGCCAACTTCAATACAAGTGTTAATAATAATATTTTGACTAGCATTATCTACAGATAGAGCTTTTATACTCAAATCCTTATCTTAATGCTAACGTAAACAGCATGTTTCATAGTCACTGTTAGGGGTTATATTGTCCATACCATAAAATCTCTAGCACTATTTCCTGCTTCTACCATCTCACAATGTTTATGTTCAGTCAGTATCATTGTTGACATGTATTTACTATTGTTGATATATGGTATATAGCATGATTATGGGCTAATATGTCATTATCTTGTGGGAATATTTAATTAAAGACATGTCTATTCAAGTTTCAACTTAATGGTTTGCAGTAAACCCATTGATACTTGAAGAAGCACTTTACTCTGCTTTTACCAAGCACTCTTACTGGCTAAAACAGTTTTGTTTAAGGCTCCATGATCTTTGCTGTGGAATTAAAGAGTCTTACTAATGTTTCTTTTGATTCCTTAGGTATGACGTTGCCTCATTCCTTACTTACAGAGTTAATTACCATGGAGAACTGGTAAGATTTTCCCACATGAATCATATACTTCTCTGGACAGTCGATGTAGACCGCAAAATTACACAGAATACTTGATAATTTTCCACTTCCAGTGCTTTATTGTCGTAAACCCTAGAAAAAAGTTAGCAGATTTTTTAACTTTGAAGCTAAAAGCCCTCATGATCTGAAACTTCACAGGATGCTAGAGTTCGATATACTGGCTTCGGAAAGGATGAGGATGAGTGGGTGAACGTCGCAAGAGGAGTGCGTGAACGGTCCATACCTTTAGAATCTTCAGAATGTCACAGAGTAAAAGTTGGAGATCTTGTGTTATGTTACCGGGTAATTTCTATGTTCTAGTTTGCTCCTTCCAAAACTGTGTTTTTATTGAGGGGATGCGCAAATGTTCAACCTCCAAAATAGTCTTATTAGTTATCGGTAATGTTTCATACTAAACTATAATGTTTATAATAGAAAGTGGGAAAGCAGTCCTAAGTGCTGATAAATGTTCTCGTATCATGTTATCTTACCCTCAGATTGGTATGCCTTATTTACAGGAAGGACAAGATCATGCTCTCTACTTCGATGCATATGTTGTGGAAATCCAGAGGAGACTGCATGATACCGGAGGTTGCCGATGCATATTCGTTGTACGCTACGAACATGATCACTATGAGGTATGTACTACGACAAGAACTGTCACAGTAACTATGCGAGCAACCCAATTTTAGACCTTTCTCTAACTTGCATGAAACTAATACTCCAAATTCTAATGATGCCTTCTTTGCTTAGGAAAAAGTGCATTTGGGGAGGCTGTGCTGCAGGCCATCAGCGTACAACTCAGACCAACTTTAATGTTAATGAAATGCTCGAATCTACTTTCCTCGGAAAAAAGTACATTTAAAAGATTTTGTTTGAAAAAGTTACTTGCATATGCGTCAGTCAGCTCGCAAGTGACCTGTCCATGCTTCCCTGGAGGAATTGAGAACACTCCCTCTTTTGGTAATTATCAGGTTAAATTGCAAGTTTAATCATGGATTTTATAATTTGTCTTTTTATTTGGTCTTAAGCATCTAATAGATCTCAACTTTTATGTTTATAGTTCCGCTCCACAACATTCAATGTTTTTTAGGAAATGATTGATATATTTGATACAAATTTAAATTTTATGTTTAATTGAATCAGATTCATAAATTTGATGTAGCAGACGGATATCTCAAAAGCTAGGTATATTTTAACTTCATTATTATGTAACCTGCACTTGAGGGGATATGTTGTTATTTGAGAAAATGGTGATCCAAC

mRNA sequence

TTTTTTTCTTTTGTTGCCCTCGGCAGAGGAGGGAAGTCCAAGTTCGACAAGCACAGTTCTGAGTTCGAACTTCTAATCGCGTCGTCTCTTTCCGCTCTGCATGATCTCTCCTGCTTTTGCCGATGGAGTTTAGAAATTTGTCAAGCGATTTAGATGATTCTGTGTTCGAATTCACACTTGCTGAGATTGTGGAAATGGACAGTATCTTAAGGGAATCTGGAGATCAAACACTTGGTCAACAGTTTTTCCAAGACGTCGCTCTTCATTTCAGTTGCTCCCCATGGCGCGCTGAAAAATCTCCCGTCACTGCGGAACAGGTGCAAAGCTGGTTTGAGAATCGGAAAAAGGAATCGCGAAGTAGTAGTACTAGTAGTAGCAAAAAAGCTCGCCCTCCACCTCCACCTCCACCTCCACTGTCTTCTCCGCCTCCGACTCCGCCGCCGAAACTTTTGCTTTATCATTCGGATAGTGCTTTTTTAACTGACATACCTGCATCTGAACCACCTGATAGTTTTCCTGAATTCAAAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTATGACGTTGCCTCATTCCTTACTTACAGAGTTAATTACCATGGAGAACTGGATGCTAGAGTTCGATATACTGGCTTCGGAAAGGATGAGGATGAGTGGGTGAACGTCGCAAGAGGAGTGCGTGAACGGTCCATACCTTTAGAATCTTCAGAATGTCACAGAGTAAAAGTTGGAGATCTTGTGTTATGTTACCGGGAAGGACAAGATCATGCTCTCTACTTCGATGCATATGTTGTGGAAATCCAGAGGAGACTGCATGATACCGGAGGTTGCCGATGCATATTCGTTGTACGCTACGAACATGATCACTATGAGGAAAAAGTGCATTTGGGGAGGCTGTGCTGCAGGCCATCAGCGTACAACTCAGACCAACTTTAATGTTAATGAAATGCTCGAATCTACTTTCCTCGGAAAAAAGTACATTTAAAAGATTTTGTTTGAAAAAGTTACTTGCATATGCGTCAGTCAGCTCGCAAGTGACCTGTCCATGCTTCCCTGGAGGAATTGAGAACACTCCCTCTTTTGGTAATTATCAGGTTAAATTGCAAGTTTAATCATGGATTTTATAATTTGTCTTTTTATTTGGTCTTAAGCATCTAATAGATCTCAACTTTTATGTTTATAGTTCCGCTCCACAACATTCAATGTTTTTTAGGAAATGATTGATATATTTGATACAAATTTAAATTTTATGTTTAATTGAATCAGATTCATAAATTTGATGTAGCAGACGGATATCTCAAAAGCTAGGTATATTTTAACTTCATTATTATGTAACCTGCACTTGAGGGGATATGTTGTTATTTGAGAAAATGGTGATCCAAC

Coding sequence (CDS)

ATGGAGTTTAGAAATTTGTCAAGCGATTTAGATGATTCTGTGTTCGAATTCACACTTGCTGAGATTGTGGAAATGGACAGTATCTTAAGGGAATCTGGAGATCAAACACTTGGTCAACAGTTTTTCCAAGACGTCGCTCTTCATTTCAGTTGCTCCCCATGGCGCGCTGAAAAATCTCCCGTCACTGCGGAACAGGTGCAAAGCTGGTTTGAGAATCGGAAAAAGGAATCGCGAAGTAGTAGTACTAGTAGTAGCAAAAAAGCTCGCCCTCCACCTCCACCTCCACCTCCACTGTCTTCTCCGCCTCCGACTCCGCCGCCGAAACTTTTGCTTTATCATTCGGATAGTGCTTTTTTAACTGACATACCTGCATCTGAACCACCTGATAGTTTTCCTGAATTCAAAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTATGACGTTGCCTCATTCCTTACTTACAGAGTTAATTACCATGGAGAACTGGATGCTAGAGTTCGATATACTGGCTTCGGAAAGGATGAGGATGAGTGGGTGAACGTCGCAAGAGGAGTGCGTGAACGGTCCATACCTTTAGAATCTTCAGAATGTCACAGAGTAAAAGTTGGAGATCTTGTGTTATGTTACCGGGAAGGACAAGATCATGCTCTCTACTTCGATGCATATGTTGTGGAAATCCAGAGGAGACTGCATGATACCGGAGGTTGCCGATGCATATTCGTTGTACGCTACGAACATGATCACTATGAGGAAAAAGTGCATTTGGGGAGGCTGTGCTGCAGGCCATCAGCGTACAACTCAGACCAACTTTAA

Protein sequence

MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL

Homology

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BLAST of Carg18761 vs. NCBI nr
Match: KAG7025835.1 (Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 571.6 bits (1472), Expect = 3.7e-159
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLT 120
           VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLT
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLT 120

Query: 121 DIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYT 180
           DIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYT
Sbjct: 121 DIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYT 180

Query: 181 GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRR 240
           GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRR
Sbjct: 181 GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRR 240

Query: 241 LHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           LHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 LHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 281

[Close]

BLAST of Carg18761 vs. NCBI nr
Match: KAG6593488.1 (Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 566.6 bits (1459), Expect = 1.2e-157
Identity = 281/283 (99.29%), Postives = 281/283 (99.29%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKAR--PPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120
           VTAEQVQSWFENRKKESRSSSTSSSKKAR  PPPPPPPPLSSPPPTPPPKLLLYHSDSAF
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180
           LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR
Sbjct: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180

Query: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240
           YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ
Sbjct: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240

Query: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Carg18761 vs. NCBI nr
Match: XP_023514197.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.6 bits (1446), Expect = 3.8e-156
Identity = 279/287 (97.21%), Postives = 280/287 (97.56%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEFRN S+DLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 5   MEFRNSSTDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 64

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKAR------PPPPPPPPLSSPPPTPPPKLLLYHS 120
           VTAEQVQSWFENRKKESRSSSTSSSKKAR      PPPPPPPPLSSPPPTPPPKLLLYHS
Sbjct: 65  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPPPPPPPLSSPPPTPPPKLLLYHS 124

Query: 121 DSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELD 180
           DSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELD
Sbjct: 125 DSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELD 184

Query: 181 ARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV 240
           ARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV
Sbjct: 185 ARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV 244

Query: 241 VEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           VEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 245 VEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 291

[Close]

BLAST of Carg18761 vs. NCBI nr
Match: XP_023000381.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita maxima])

HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155
Identity = 276/283 (97.53%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEF++ SSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFKSSSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPP--PPPPPPLSSPPPTPPPKLLLYHSDSAF 120
           VTAEQVQSWFENRKKESRSSSTSSSKKARPP  PPPPPPLSSPPPTPPPKLLLYHSDSAF
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPSPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180
           LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR
Sbjct: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180

Query: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240
           Y+GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV+EIQ
Sbjct: 181 YSGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVIEIQ 240

Query: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Carg18761 vs. NCBI nr
Match: XP_022964467.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita moschata])

HSP 1 Score: 558.5 bits (1438), Expect = 3.2e-155
Identity = 277/283 (97.88%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEFRN SSD+DDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFRNSSSDIDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKAR--PPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120
           VTAEQVQSWFENRKKESRSSSTSSSKK R  PPPPPPPPLSSPPPTPPPKLLLYHSDSAF
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKPRPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180
           LTDIPASEPPDS PEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR
Sbjct: 121 LTDIPASEPPDSSPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180

Query: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240
           YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ
Sbjct: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240

Query: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Carg18761 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.1e-56
Identity = 131/268 (48.88%), Postives = 172/268 (64.18%), Query Frame = 0


Query: 7   SSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQV 66
           S D      EFTL+EIV+M+++ +E GDQ+L + F Q VA  FSCS  R  KS +T +QV
Sbjct: 4   SDDSSHYFTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQV 63

Query: 67  QSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLTDIPASE 126
           Q WF+ + K     S   SK    PP     LS+P          Y S+++  T +  S 
Sbjct: 64  QIWFQEKLKH---QSQPKSKTLPSPPLQIHDLSNPSS--------YASNASNATFVGNS- 123

Query: 127 PPDSFPEF-KGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKD 186
              +F +  KGKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GEL+ RVR++GF   
Sbjct: 124 ---TFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNR 183

Query: 187 EDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTG 246
            DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD  
Sbjct: 184 HDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHA 243

Query: 247 GCRCIFVVRYEHDHYEEKVHLGRLCCRP 274
            C C+F+VRYE D+ EE + L R+C RP
Sbjct: 244 RCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]

BLAST of Carg18761 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-44
Identity = 112/273 (41.03%), Postives = 151/273 (55.31%), Query Frame = 0


Query: 15  FEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQVQSWFENRK 74
           F F L E+ EM++IL +      G+   + +A  FS SP R  K  V  +Q+ +WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  KESRSSSTSSSKKARPPPPPPPPL-----SSPPPTPPPKLLLYHSDSAFLTDIPASEPPD 134
              R+    +  K      P   L     S   P   PK      +   +T  P+     
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSG---S 131

Query: 135 SFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKDEDEW 194
             P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+ GF  +EDEW
Sbjct: 132 LVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 191

Query: 195 VNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTGGCRC 254
           +NV + VR+RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD  GCRC
Sbjct: 192 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 251

Query: 255 IFVVRYEHDHYEEKVHLGRLCCRPSA-YNSDQL 282
            F+VRY HD  EE V L ++C RP   Y   QL
Sbjct: 252 RFLVRYSHDQSEEIVPLRKICRRPETDYRLQQL 281

[Close]

BLAST of Carg18761 vs. ExPASy TrEMBL
Match: A0A6J1KFQ7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494637 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.1e-156
Identity = 276/283 (97.53%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEF++ SSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFKSSSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPP--PPPPPPLSSPPPTPPPKLLLYHSDSAF 120
           VTAEQVQSWFENRKKESRSSSTSSSKKARPP  PPPPPPLSSPPPTPPPKLLLYHSDSAF
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPSPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180
           LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR
Sbjct: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180

Query: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240
           Y+GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV+EIQ
Sbjct: 181 YSGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVIEIQ 240

Query: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Carg18761 vs. ExPASy TrEMBL
Match: A0A6J1HHW3 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464481 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.6e-155
Identity = 277/283 (97.88%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           MEFRN SSD+DDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP
Sbjct: 1   MEFRNSSSDIDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKAR--PPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120
           VTAEQVQSWFENRKKESRSSSTSSSKK R  PPPPPPPPLSSPPPTPPPKLLLYHSDSAF
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKPRPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180
           LTDIPASEPPDS PEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR
Sbjct: 121 LTDIPASEPPDSSPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVR 180

Query: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240
           YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ
Sbjct: 181 YTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQ 240

Query: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL
Sbjct: 241 RRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Carg18761 vs. ExPASy TrEMBL
Match: A0A6J1DBC4 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC111018742 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130
Identity = 234/278 (84.17%), Postives = 253/278 (91.01%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           ME+R+L  DLDD  FEFTLAEIVEMD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS 
Sbjct: 1   MEYRSLPKDLDDYPFEFTLAEIVEMDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSS 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLT 120
           VTAEQV+ WFENR+ E R    SSSKKA PPPPPP    SPPP PPPKLLLYHSDS+FLT
Sbjct: 61  VTAEQVKGWFENRQNELR----SSSKKAPPPPPPP----SPPPPPPPKLLLYHSDSSFLT 120

Query: 121 DIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYT 180
           D P+SEPPDS PE KGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY 
Sbjct: 121 DAPSSEPPDSLPELKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYA 180

Query: 181 GFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRR 240
           GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYVVEIQRR
Sbjct: 181 GFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRR 240

Query: 241 LHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNS 279
           LHD GGCRCIFVVRY+HD++EEKVHLGRLCCRP+AYN+
Sbjct: 241 LHDIGGCRCIFVVRYDHDNHEEKVHLGRLCCRPAAYNN 270

[Close]

BLAST of Carg18761 vs. ExPASy TrEMBL
Match: A0A1S3CIG7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500784 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.8e-128
Identity = 236/287 (82.23%), Postives = 253/287 (88.15%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60
           ME    S  LDDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSP 60

Query: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPP------LSSPPPTPPPKLLLYHS 120
           VTAE V +WFENR+KE R    SSSKKARPPPPPPPP       SSPPPTPPPKLLLYHS
Sbjct: 61  VTAEHVHAWFENRRKELR----SSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHS 120

Query: 121 DSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELD 180
           +S FLT  P+SEP    PEF GKATDLSELAFEAFSSRD+AWYDVASFLTYR+N HGELD
Sbjct: 121 ESDFLTHAPSSEP----PEFIGKATDLSELAFEAFSSRDHAWYDVASFLTYRINCHGELD 180

Query: 181 ARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYV 240
           ARVRY GFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLC+RE QDHALYFDAYV
Sbjct: 181 ARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYFDAYV 240

Query: 241 VEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           VEIQRRLHD GGCRCIFVVRYEHDHYEEKVH+GRLCCRPSA+NSD++
Sbjct: 241 VEIQRRLHDIGGCRCIFVVRYEHDHYEEKVHIGRLCCRPSAFNSDRI 279

[Close]

BLAST of Carg18761 vs. ExPASy TrEMBL
Match: A0A5A7UBT5 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold481G00190 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126
Identity = 236/291 (81.10%), Postives = 253/291 (86.94%), Query Frame = 0


Query: 1   MEFRNLSSDLDDSVFEFTLAE----IVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRA 60
           ME    S  LDDS FEFTLAE    IVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSYIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA 60

Query: 61  EKSPVTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPP------LSSPPPTPPPKLL 120
            KSPVTAE V +WFENR+KE R    SSSKKARPPPPPPPP       SSPPPTPPPKLL
Sbjct: 61  AKSPVTAEHVHAWFENRRKELR----SSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLL 120

Query: 121 LYHSDSAFLTDIPASEPPDSFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYH 180
           LYHS+S FLT  P+SEP    PEF GKATDLSELAFEAFSSRD+AWYDVASFLTYR+N H
Sbjct: 121 LYHSESDFLTHAPSSEP----PEFIGKATDLSELAFEAFSSRDHAWYDVASFLTYRINCH 180

Query: 181 GELDARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYF 240
           GELDARVRY GFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLC+RE QDHALYF
Sbjct: 181 GELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYF 240

Query: 241 DAYVVEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 282
           DAYVVEIQRRLHD GGCRCIFVVRYEHDHYEEKVH+GRLCCRPSA+NSD++
Sbjct: 241 DAYVVEIQRRLHDIGGCRCIFVVRYEHDHYEEKVHIGRLCCRPSAFNSDRI 283

[Close]

BLAST of Carg18761 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 219.2 bits (557), Expect = 4.3e-57
Identity = 131/268 (48.88%), Postives = 172/268 (64.18%), Query Frame = 0


Query: 7   SSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQV 66
           S D      EFTL+EIV+M+++ +E GDQ+L + F Q VA  FSCS  R  KS +T +QV
Sbjct: 4   SDDSSHYFTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQV 63

Query: 67  QSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLTDIPASE 126
           Q WF+ + K     S   SK    PP     LS+P          Y S+++  T +  S 
Sbjct: 64  QIWFQEKLKH---QSQPKSKTLPSPPLQIHDLSNPSS--------YASNASNATFVGNS- 123

Query: 127 PPDSFPEF-KGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKD 186
              +F +  KGKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GEL+ RVR++GF   
Sbjct: 124 ---TFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNR 183

Query: 187 EDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTG 246
            DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD  
Sbjct: 184 HDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHA 243

Query: 247 GCRCIFVVRYEHDHYEEKVHLGRLCCRP 274
            C C+F+VRYE D+ EE + L R+C RP
Sbjct: 244 RCNCVFLVRYELDNTEESLGLERICRRP 256

[Close]

BLAST of Carg18761 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 206.5 bits (524), Expect = 2.9e-53
Identity = 125/256 (48.83%), Postives = 164/256 (64.06%), Query Frame = 0


Query: 7   SSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQV 66
           S D      EFTL+EIV+M+++ +E GDQ+L + F Q VA  FSCS  R  KS +T +QV
Sbjct: 4   SDDSSHYFTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQV 63

Query: 67  QSWFENRKKESRSSSTSSSKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLTDIPASE 126
           Q WF+ + K     S   SK    PP     LS+P          Y S+++  T +  S 
Sbjct: 64  QIWFQEKLKH---QSQPKSKTLPSPPLQIHDLSNPSS--------YASNASNATFVGNS- 123

Query: 127 PPDSFPEF-KGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKD 186
              +F +  KGKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GEL+ RVR++GF   
Sbjct: 124 ---TFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNR 183

Query: 187 EDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTG 246
            DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD  
Sbjct: 184 HDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHA 243

Query: 247 GCRCIFVVRYEHDHYE 262
            C C+F+VRYE D+ E
Sbjct: 244 RCNCVFLVRYELDNTE 244

[Close]

BLAST of Carg18761 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 4.3e-49
Identity = 116/238 (48.74%), Postives = 153/238 (64.29%), Query Frame = 0


Query: 25  MDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQVQSWFENRKKESRSSSTSS 84
           M+++ +E GDQ+L + F Q VA  FSCS  R  KS +T +QVQ WF+ + K     S   
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH---QSQPK 60

Query: 85  SKKARPPPPPPPPLSSPPPTPPPKLLLYHSDSAFLTDIPASEPPDSFPEF-KGKATDLSE 144
           SK    PP     LS+P          Y S+++  T +  S    +F +  KGKA+DL++
Sbjct: 61  SKTLPSPPLQIHDLSNPSS--------YASNASNATFVGNS----TFVQTRKGKASDLAD 120

Query: 145 LAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKDEDEWVNVARGVRERSIPL 204
           LAFEA S+RD AWYDV+SFLTYRV   GEL+ RVR++GF    DEWVNV   VRERSIP+
Sbjct: 121 LAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPV 180

Query: 205 ESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTGGCRCIFVVRYEHDHYE 262
           E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD   C C+F+VRYE D+ E
Sbjct: 181 EPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 223

[Close]

BLAST of Carg18761 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45
Identity = 112/273 (41.03%), Postives = 151/273 (55.31%), Query Frame = 0


Query: 15  FEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQVQSWFENRK 74
           F F L E+ EM++IL +      G+   + +A  FS SP R  K  V  +Q+ +WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  KESRSSSTSSSKKARPPPPPPPPL-----SSPPPTPPPKLLLYHSDSAFLTDIPASEPPD 134
              R+    +  K      P   L     S   P   PK      +   +T  P+     
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSG---S 131

Query: 135 SFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKDEDEW 194
             P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+ GF  +EDEW
Sbjct: 132 LVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 191

Query: 195 VNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTGGCRC 254
           +NV + VR+RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD  GCRC
Sbjct: 192 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 251

Query: 255 IFVVRYEHDHYEEKVHLGRLCCRPSA-YNSDQL 282
            F+VRY HD  EE V L ++C RP   Y   QL
Sbjct: 252 RFLVRYSHDQSEEIVPLRKICRRPETDYRLQQL 281

[Close]

BLAST of Carg18761 vs. TAIR 10
Match: AT3G18380.3 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 178.3 bits (451), Expect = 8.4e-45
Identity = 112/274 (40.88%), Postives = 153/274 (55.84%), Query Frame = 0


Query: 15  FEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSPVTAEQVQSWFENRK 74
           F F L E+ EM++IL +      G+   + +A  FS SP R  K  V  +Q+ +WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  KESRSSSTSSSKKARPPPPPPPPL-----SSPPPTPPPKLLLYHSDSAFLTDIPASEPPD 134
              R+    +  K      P   L     S   P   PK       +    ++P   P  
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPK------TTHMTGNLPGMTPAP 131

Query: 135 SFPEFKGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDARVRYTGFGKDEDEW 194
           S P      +D S L FEA S+RD AWYDV +FL +R    G+ + +VR+ GF  +EDEW
Sbjct: 132 SVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 191

Query: 195 VNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDTGGCRC 254
           +NV + VR+RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD  GCRC
Sbjct: 192 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 251

Query: 255 IFVVRYEHDHYEEK-VHLGRLCCRPSA-YNSDQL 282
            F+VRY HD  E++ V L ++C RP   Y   QL
Sbjct: 252 RFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQL 279

The following BLAST results are available for this feature:

BLAST of Carg18761 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025835.1	3.7e-159	100.00	Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593488.1	1.2e-157	99.29	Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023514197.1	3.8e-156	97.21	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000381.1	1.9e-155	97.53	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita maxima]	[more]
XP_022964467.1	3.2e-155	97.88	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita moschata]	[more]

BLAST of Carg18761 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	6.1e-56	48.88	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	4.1e-44	41.03	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Carg18761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KFQ7	9.1e-156	97.53	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HHW3	1.6e-155	97.88	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1DBC4	1.7e-130	84.17	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CIG7	2.8e-128	82.23	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7UBT5	1.5e-126	81.10	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. ...	[more]

BLAST of Carg18761 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	4.3e-57	48.88	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	2.9e-53	48.83	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.1	4.3e-49	48.74	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.1	2.9e-45	41.03	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.3	8.4e-45	40.88	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.30.30.140		coord: 203..275 e-value: 1.7E-33 score: 116.1
None	No IPR available	GENE3D	2.40.50.40		coord: 141..202 e-value: 6.7E-30 score: 105.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..110
None	No IPR available	PANTHER	PTHR33827:SF12	SUBFAMILY NOT NAMED	coord: 11..281
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 143..270 e-value: 2.8E-38 score: 131.1
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 11..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18761-RA	Carg18761-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding