Carg18641 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18641
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PHD finger protein ALFIN-LIKE 4-like
Location	Carg_Chr12: 11936906 .. 11939595 (+)
RNA-Seq Expression	Carg18641
Synteny	Carg18641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACAGAAAGAGCAGCCCAATCTTCAAAATCTCAACTGCAATAAGAACACTCTCCTTCTGCTTCTGAATCTTTTTGGGCGTTTGATTTTCGTTTCTCGGTGCCTTTCTTCTCCATAGCTATCCATTGCATGAGTGGCTTTCTTGCTCTTTGTTCTGCTGCTTTTCGCTCTCCATTTCTTCTTATTTCCATTTCCGCACCCATTTCTTGCTGTTTGATTCTTCTTTTCTCGAATTCAAGCTTTATACGGGGCTCTGGATTCAAGCAAACATGGATGGAGGAGCGGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCACCGGTCTTGTTCAATCTCTGTTTTTCCTTTTCCGCCTCGTCTATTTCTCGCTTTATGTTTTCAAGTTTTAGAGTATTAGATAAGATTGGCGTTCGTAGATTTCTGATTAGTTTTCTGAGGGGAAACTTGTAATTAATTACTCTTTTCCTCTTGCCATTTCTTTTGCAGATGTCGAAGAATTTTATCAGCAGTGCGACCCTGGTCTGACCTCCCTTCTCTGTGTTCTTCCTCTTTTGCGTAACTTGAGGGTTTTCTTTCACTTGTGATTGCGATTTGAGAGTCACGAATTTTCTTTTGAAATCTTCTCTGTGGCGCATTCTCTTTCACTCGTGAATTTTTGGTAATGGAAAATTAGAAATACAATGTGAAAATTCTTGTTTGGATTCACCAACTTTTGTTTTTGTTTTCATCTAGCTTGCACGTAGGAATTAATTGTTCATGGAACTTTAGTCACTGTTTGTTTCTTGAGAATGAAGTTGGTGACATTACTTTTCTCCATGCCTTCTTCTGTGTAGACCTTCAAAACATAAATGCGGTAGTTATTGGGAACCCAATTCCTTCTAGTATTTGAATAATAATATAATTGCTTTCGGAGTGGAACCATTTACTTTTTTTCTAATAGCACTCAAGTACTCGATGAAGCCATTTCTGCTTTTACGGACAGTGCTGAGATTTGCAATTATTTACACTACTGATAATCAATTTCAGAGAAGGAAAACCTCTGCCTATATGGGTTCCCTAATGAACTGTGGGAAGTTAATTTGCCTGCTGAAGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGTATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTGTCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTACTTTGGTGCTAGATTTGGCTTTGATAAATCTGACAGGTACTTCTTCCCCTTATCATTTATGAGATAAATTTGCTGGCCGTTGCTGCTGTGCTGCTGCACGGCGGCACCATAGTTCAGTGACGTGTATGGTTTGTGTCTTGAAAATACAAAATTGTCACTGATATTTAAAAAAGAAAAAGAGAAACAGAATGATTAGATGTGCAGAGCACTACACTGATGTCACTGATGTCTGGCACATCTCTTTATTAATTGTGTTTCCACCTGTTCTTTGAAGATTGCACAATATGGAAATTGACTGATGGGCACTTATGTTTTATATGTAAAAGCGTTTATTTCTCTTATATAATTATCAAAGAAACTTAGGTGGGTGGGAAAATAGGCTCATAATTCATGTACTCTATCTCTTGTGGGTGCCATTATTTGCTAACTTTTAGAATTTGATTCATGATCCAGGAAACGACTTTTTACAATGATAAATGATATGCCCACAATCTTTGAGGTCGTGACGGGAGGTGTGAAGAAACAGGGAAAAGACAAGTCGTTAGTTTCAAATAACATCAGCAACAAATCCAAGACAGGCTCAAAAGGGGTAAACCAAATTTTAGTGTCTTGTTTCTTTTTCATTCGATGATCACTTAGTTGGGTGTAGATTGATCAAAGATTATTTTAACAATTGCTCAAGAATTTGAACATTAGTGCAGCCATTACTATAATCAGATATTTCTTTGTTAGGAATAACTGCCCTCCATAATGGTATGACATTGTCCACGTTGAGCATAAGATCTCGTGGCTTTACTTTTGGACTTCTCTAAAAGGCCTCATACCAATGGAAATGTATTCCTTACTTGTAAACTCATGATCGTTCCCTAAGTTAGTCAACGTGGGACTACCTCTTAACAATCCTCAACATTCTTGACCCTATGCAATCGTTCTCTTTTTCAAAAACAGAAAACAGACTATAAGAGAAACTTACAAAGGAAAGAGTTGTAAAATTTTTGGGATTCCTGAACCACCACCATGTGCACATCTGATGTTGGTGTTATTCATTTTGAAAACTTAGTTCTTGACTACTCATGATGGAATTTATCTGCAACTCTAAATTTCCAGTCGGTTTTCATTGTATATATGATCTTTTGACCATATTATATTTGTTTAACTTGTTTTCCCTTTAACGACATTAACATGGTTAACAGCGAGGATCTGAGGCAAGCAAATTGTCAAAGGGGTTAGCAAAAGAAGAGGATGAGGGACTAGTAGACGAGGAAGAGGAGGAGGAGCACGGGGAGACCTTATGCGGGGCGTGCGGGGAAAACTATGCATCGGACGAGTTCTGGATATGTTGTGACCTATGTGAGAAGTGGTTCCATGGGAAGTGTGTGAAGATCACTCCTGCAAGAGCCGAACATATCAAGCAATACAAATGCCCC

mRNA sequence

GAACAGAAAGAGCAGCCCAATCTTCAAAATCTCAACTGCAATAAGAACACTCTCCTTCTGCTTCTGAATCTTTTTGGGCGTTTGATTTTCGTTTCTCGGTGCCTTTCTTCTCCATAGCTATCCATTGCATGAGTGGCTTTCTTGCTCTTTGTTCTGCTGCTTTTCGCTCTCCATTTCTTCTTATTTCCATTTCCGCACCCATTTCTTGCTGTTTGATTCTTCTTTTCTCGAATTCAAGCTTTATACGGGGCTCTGGATTCAAGCAAACATGGATGGAGGAGCGGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCACCGATGTCGAAGAATTTTATCAGCAGTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGGTTCCCTAATGAACTGTGGGAAGTTAATTTGCCTGCTGAAGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGTATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTGTCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTACTTTGGTGCTAGATTTGGCTTTGATAAATCTGACAGGAAACGACTTTTTACAATGATAAATGATATGCCCACAATCTTTGAGGTCGTGACGGGAGGTGTGAAGAAACAGGGAAAAGACAAGTCGTTAGTTTCAAATAACATCAGCAACAAATCCAAGACAGGCTCAAAAGGGCGAGGATCTGAGGCAAGCAAATTGTCAAAGGGGTTAGCAAAAGAAGAGGATGAGGGACTAGTAGACGAGGAAGAGGAGGAGGAGCACGGGGAGACCTTATGCGGGGCGTGCGGGGAAAACTATGCATCGGACGAGTTCTGGATATGTTGTGACCTATGTGAGAAGTGGTTCCATGGGAAGTGTGTGAAGATCACTCCTGCAAGAGCCGAACATATCAAGCAATACAAATGCCCC

Coding sequence (CDS)

ATGGATGGAGGAGCGGCTTACAATCCTCGGACTGTGGAAGAGGTTTTCAGGGACTTTAAGGGCCGTCGTGCCGGAATGATTAGAGCTCTCACCACCGATGTCGAAGAATTTTATCAGCAGTGCGACCCTGAGAAGGAAAACCTCTGCCTATATGGGTTCCCTAATGAACTGTGGGAAGTTAATTTGCCTGCTGAAGAAGTACCTCCAGAGCTTCCGGAACCAGCATTGGGTATTAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTGTCCCTTGTTGCCGTTCATAGTGACGCATGGCTTCTTGCTGTGGCTTTCTACTTTGGTGCTAGATTTGGCTTTGATAAATCTGACAGGAAACGACTTTTTACAATGATAAATGATATGCCCACAATCTTTGAGGTCGTGACGGGAGGTGTGAAGAAACAGGGAAAAGACAAGTCGTTAGTTTCAAATAACATCAGCAACAAATCCAAGACAGGCTCAAAAGGGCGAGGATCTGAGGCAAGCAAATTGTCAAAGGGGTTAGCAAAAGAAGAGGATGAGGGACTAGTAGACGAGGAAGAGGAGGAGGAGCACGGGGAGACCTTATGCGGGGCGTGCGGGGAAAACTATGCATCGGACGAGTTCTGGATATGTTGTGACCTATGTGAGAAGTGGTTCCATGGGAAGTGTGTGAAGATCACTCCTGCAAGAGCCGAACATATCAAGCAATACAAATGCCCC

Protein sequence

MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKEEDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCP

Homology

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BLAST of Carg18641 vs. NCBI nr
Match: KAG7021348.1 (PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.3 bits (1305), Expect = 7.4e-140
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

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BLAST of Carg18641 vs. NCBI nr
Match: XP_022937738.1 (PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >XP_022937739.1 PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >KAG6586490.1 PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 503.8 bits (1296), Expect = 8.1e-139
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNE WEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL+DEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

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BLAST of Carg18641 vs. NCBI nr
Match: XP_023537397.1 (PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023537398.1 PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.5 bits (1290), Expect = 4.0e-138
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNE WEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNN SNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNSSNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL+DEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

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BLAST of Carg18641 vs. NCBI nr
Match: XP_022966039.1 (PHD finger protein ALFIN-LIKE 4-like [Cucurbita maxima] >XP_022966040.1 PHD finger protein ALFIN-LIKE 4-like [Cucurbita maxima])

HSP 1 Score: 500.7 bits (1288), Expect = 6.9e-138
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MD GAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV
Sbjct: 1   MDRGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNN SNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNSSNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL+DEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

[Close]

BLAST of Carg18641 vs. NCBI nr
Match: XP_022154756.1 (PHD finger protein ALFIN-LIKE 4-like [Momordica charantia] >XP_022154758.1 PHD finger protein ALFIN-LIKE 4-like [Momordica charantia])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 230/243 (94.65%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNE WEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMIND+PTIFEVVTG VKKQGKDKSLV+NN SNKSKTGSKGRGSE+SK  KGLAK+
Sbjct: 121 KRLFTMINDLPTIFEVVTGNVKKQGKDKSLVTNNSSNKSKTGSKGRGSESSKFPKGLAKD 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEG+ DEE+EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGM-DEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 242

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BLAST of Carg18641 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 411.8 bits (1057), Expect = 5.5e-114
Identity = 200/247 (80.97%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV+EF++ CDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSDAWLLAVAF+FGARFGFDK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEA-SKLSKGLAK 180
           KRLF M+ND+PTIFEVV G  KKQGKDKS VSNN SN+SK+ SK RGSE+ +K SK   K
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSK-RGSESRAKFSKPEPK 180

Query: 181 ---EEDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEH 240
              EE+E  V+EE+E+E GET CGACGE+YA+DEFWICCDLCE WFHGKCVKITPARAEH
Sbjct: 181 DDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEH 240

Query: 241 IKQYKCP 244
           IKQYKCP
Sbjct: 241 IKQYKCP 246

[Close]

BLAST of Carg18641 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 8.2e-110
Identity = 189/252 (75.00%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFPNE+WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSDAWLL+V+FYFG+RFGFD++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGL-A 180
           RKRLF+MIN++PT++EVVTG  +KQ K+    +N   N+SK+ SK RG E SK SK + A
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLE-SKSSKTIHA 180

Query: 181 KEEDEGL-------VDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITP 240
           K+E+EGL        ++E+E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCP 244
           ARAEHIK YKCP
Sbjct: 241 ARAEHIKHYKCP 251

[Close]

BLAST of Carg18641 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.2e-106
Identity = 184/244 (75.41%), Postives = 208/244 (85.25%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWE 60
           M+GGAA YNPRTVEEVF+DFKGRR  +++ALTTDV+EFYQQCDPEKENLCLYG PNE WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSDAWLL+V+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAK 180
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N   NKSK+ SK R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 EEDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQ 240
           EEDE  +DE++E++HGETLCGACG++  +DEFWICCDLCEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 EEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCP 244
           YKCP
Sbjct: 241 YKCP 241

[Close]

BLAST of Carg18641 vs. ExPASy Swiss-Prot
Match: B8B8C5 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.0e-104
Identity = 186/256 (72.66%), Postives = 210/256 (82.03%), Query Frame = 0


Query: 5   AAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAG++RALT DVE+F++QCDPEKENLCLYGFPNE WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSDAWLL+VAFYFGARFGFDK+DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 TMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLS---------K 184
            MIND+PTIFEVV+G  K + K  S  +N+ ++KSK+ +K + SE              K
Sbjct: 123 GMINDLPTIFEVVSG--KSKAKPPS-ANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 GLAKEEDEGLVDEE--------EEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCV 244
              +EE+ G  DEE         EEEHGETLCGACGE+Y +DEFWICCD+CEKWFHGKCV
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCV 242

[Close]

BLAST of Carg18641 vs. ExPASy Swiss-Prot
Match: Q6YTY3 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.0e-104
Identity = 186/257 (72.37%), Postives = 210/257 (81.71%), Query Frame = 0


Query: 5   AAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAG++RALT DVE+F++QCDPEKENLCLYGFPNE WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSDAWLL+VAFYFGARFGFDK+DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 TMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLS---------K 184
            MIND+PTIFEVV+G  K + K  S  +N+ ++KSK+ +K + SE              K
Sbjct: 123 GMINDLPTIFEVVSG--KSKAKPPS-ANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 GLAKEEDEGLVDEE---------EEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKC 244
              +EE+ G  DEE          EEEHGETLCGACGE+Y +DEFWICCD+CEKWFHGKC
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKC 242

[Close]

BLAST of Carg18641 vs. ExPASy TrEMBL
Match: A0A6J1FGT0 (PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111444046 PE=3 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 3.9e-139
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNE WEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL+DEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

[Close]

BLAST of Carg18641 vs. ExPASy TrEMBL
Match: A0A6J1HSJ7 (PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465768 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.3e-138
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MD GAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV
Sbjct: 1   MDRGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNN SNKSKTGSKGRGSEASKLSKGLAKE
Sbjct: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNSSNKSKTGSKGRGSEASKLSKGLAKE 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL+DEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGLLDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 243

[Close]

BLAST of Carg18641 vs. ExPASy TrEMBL
Match: A0A6J1DL70 (PHD finger protein ALFIN-LIKE 4-like OS=Momordica charantia OX=3673 GN=LOC111021932 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 5.5e-133
Identity = 230/243 (94.65%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNE WEV
Sbjct: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMIND+PTIFEVVTG VKKQGKDKSLV+NN SNKSKTGSKGRGSE+SK  KGLAK+
Sbjct: 121 KRLFTMINDLPTIFEVVTGNVKKQGKDKSLVTNNSSNKSKTGSKGRGSESSKFPKGLAKD 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEG+ DEE+EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGM-DEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 242

[Close]

BLAST of Carg18641 vs. ExPASy TrEMBL
Match: A0A6J1KET6 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493665 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 6.5e-126
Identity = 220/243 (90.53%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGG AYNPRTVEEVFRDFKGRRAGMIRALTTDV EFYQ CDPEKENLCLYG PNE WEV
Sbjct: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DKSDR
Sbjct: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNN S+KS+TG KGR SE+SKLS GLAK+
Sbjct: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           EDEGL +EE EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDEGL-NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 242

[Close]

BLAST of Carg18641 vs. ExPASy TrEMBL
Match: A0A6J1G4T7 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450718 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 219/243 (90.12%), Postives = 230/243 (94.65%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           MDGG AYNPRTVEEVFRDFKGRRAGMIRALTTDV EFYQ CDPEKENLCLYG PNE WEV
Sbjct: 1   MDGGVAYNPRTVEEVFRDFKGRRAGMIRALTTDVVEFYQLCDPEKENLCLYGLPNEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPE+PEPALGINFARDGMQ+KDWLSLVAVHSDAWLLAVAFYFG+RFG DKSDR
Sbjct: 61  NLPAEEVPPEVPEPALGINFARDGMQKKDWLSLVAVHSDAWLLAVAFYFGSRFGCDKSDR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAKE 180
           KRLFTMIND+PTIFEVVTG VKKQGKDKSLVSNN S+KS+TG KGR SE+SKLS GLAK+
Sbjct: 121 KRLFTMINDLPTIFEVVTGSVKKQGKDKSLVSNNSSSKSRTGPKGRDSESSKLSNGLAKD 180

Query: 181 EDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQY 240
           ED+GL +EE EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 181 EDDGL-NEEAEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQY 240

Query: 241 KCP 244
           KCP
Sbjct: 241 KCP 242

[Close]

BLAST of Carg18641 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 411.8 bits (1057), Expect = 3.9e-115
Identity = 200/247 (80.97%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           M+ G AYNPRTVEEVFRDFKGRRAGMI+ALTTDV+EF++ CDPEKENLCLYG PNE WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSDAWLLAVAF+FGARFGFDK+DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEA-SKLSKGLAK 180
           KRLF M+ND+PTIFEVV G  KKQGKDKS VSNN SN+SK+ SK RGSE+ +K SK   K
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSK-RGSESRAKFSKPEPK 180

Query: 181 ---EEDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEH 240
              EE+E  V+EE+E+E GET CGACGE+YA+DEFWICCDLCE WFHGKCVKITPARAEH
Sbjct: 181 DDEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEH 240

Query: 241 IKQYKCP 244
           IKQYKCP
Sbjct: 241 IKQYKCP 246

[Close]

BLAST of Carg18641 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 397.9 bits (1021), Expect = 5.9e-111
Identity = 189/252 (75.00%), Postives = 224/252 (88.89%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFPNE+WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSDAWLL+V+FYFG+RFGFD++D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGL-A 180
           RKRLF+MIN++PT++EVVTG  +KQ K+    +N   N+SK+ SK RG E SK SK + A
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLE-SKSSKTIHA 180

Query: 181 KEEDEGL-------VDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITP 240
           K+E+EGL        ++E+E+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCP 244
           ARAEHIK YKCP
Sbjct: 241 ARAEHIKHYKCP 251

[Close]

BLAST of Carg18641 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 386.0 bits (990), Expect = 2.3e-107
Identity = 184/244 (75.41%), Postives = 208/244 (85.25%), Query Frame = 0


Query: 1   MDGGAA-YNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWE 60
           M+GGAA YNPRTVEEVF+DFKGRR  +++ALTTDV+EFYQQCDPEKENLCLYG PNE WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSDAWLL+V+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEASKLSKGLAK 180
           RKRLF MIND+PTIFEVVTG  K   KDKS  +N   NKSK+ SK R SE         K
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 180

Query: 181 EEDEGLVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQ 240
           EEDE  +DE++E++HGETLCGACG++  +DEFWICCDLCEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 EEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCP 244
           YKCP
Sbjct: 241 YKCP 241

[Close]

BLAST of Carg18641 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-99
Identity = 174/239 (72.80%), Postives = 200/239 (83.68%), Query Frame = 0


Query: 9   PRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEVNLPAEEVP 68
           PRTVEEVF DF+GRRAG+I+AL+TDV++FY QCDPEKENLCLYG PNE WEVNLP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 69  PELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDRKRLFTMIN 128
           PELPEPALGINFARDGMQEKDW+SLVAVHSD+WL++VAFYFGARFGF K++RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 129 DMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSE----ASKLSKGLAKEEDEG 188
           D+PTIFEVVTG   KQ KD+S  ++N S    +G K R SE    ASK+S    KE++ G
Sbjct: 129 DLPTIFEVVTGNA-KQSKDQS-ANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESG 188

Query: 189 LVDEEEEEEHGETLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCP 244
             DE+E++E G  +CGACG+NY  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCP
Sbjct: 189 --DEDEDDEQG-AVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCP 242

[Close]

BLAST of Carg18641 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 353.2 bits (905), Expect = 1.7e-97
Identity = 174/249 (69.88%), Postives = 200/249 (80.32%), Query Frame = 0


Query: 1   MDGGAAYNPRTVEEVFRDFKGRRAGMIRALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60
           M+G     PRTVEEVF DF+GRRAG+I+ALT D+ +FYQ CDPEKENLCLYG PNE WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKSDR 120
           NLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHSD+WLL+VAFYFGARFGF K++R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFTMINDMPTIFEVVTGGVKKQGKDKSLVSNNISNKSKTGSKGRGSEA----SKLSKG 180
           KRLF MIN++PTIFEVV+G   KQ KD S V+NN S    +G K R SE+    +K+S  
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLS-VNNNNSKSKPSGVKSRQSESLSKVAKMSSP 180

Query: 181 LAKEEDEGLVDEEEEEEHGE--TLCGACGENYASDEFWICCDLCEKWFHGKCVKITPARA 240
             KEE+E   + E+E E  E   +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+A
Sbjct: 181 PPKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKA 240

Query: 241 EHIKQYKCP 244
           EHIK YKCP
Sbjct: 241 EHIKHYKCP 247

The following BLAST results are available for this feature:

BLAST of Carg18641 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021348.1	7.4e-140	100.00	PHD finger protein ALFIN-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022937738.1	8.1e-139	99.18	PHD finger protein ALFIN-LIKE 4-like [Cucurbita moschata] >XP_022937739.1 PHD fi...	[more]
XP_023537397.1	4.0e-138	98.77	PHD finger protein ALFIN-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023537398....	[more]
XP_022966039.1	6.9e-138	98.77	PHD finger protein ALFIN-LIKE 4-like [Cucurbita maxima] >XP_022966040.1 PHD fing...	[more]
XP_022154756.1	1.1e-132	94.65	PHD finger protein ALFIN-LIKE 4-like [Momordica charantia] >XP_022154758.1 PHD f...	[more]

BLAST of Carg18641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81488	5.5e-114	80.97	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
Q5XEM9	8.2e-110	75.00	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	3.2e-106	75.41	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
B8B8C5	3.0e-104	72.66	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26...	[more]
Q6YTY3	4.0e-104	72.37	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]

BLAST of Carg18641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGT0	3.9e-139	99.18	PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114440...	[more]
A0A6J1HSJ7	3.3e-138	98.77	PHD finger protein ALFIN-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111465768...	[more]
A0A6J1DL70	5.5e-133	94.65	PHD finger protein ALFIN-LIKE 4-like OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1KET6	6.5e-126	90.53	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G4T7	1.5e-125	90.12	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg18641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26210.1	3.9e-115	80.97	alfin-like 4	[more]
AT5G20510.1	5.9e-111	75.00	alfin-like 5	[more]
AT3G42790.1	2.3e-107	75.41	alfin-like 3	[more]
AT1G14510.1	1.4e-99	72.80	alfin-like 7	[more]
AT2G02470.1	1.7e-97	69.88	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 198..243 e-value: 0.001 score: 28.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 188..243 e-value: 2.2E-24 score: 86.6
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 199..243 e-value: 6.5E-9 score: 35.6
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 196..243 score: 8.5911
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 11..139 e-value: 1.1E-69 score: 232.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..168
None	No IPR available	PANTHER	PTHR12321:SF141	PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1	coord: 3..243
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 3..243
IPR044104	Alfin1-like, PHD finger	CDD	cd15613	PHD_AL_plant	coord: 198..243 e-value: 8.44128E-29 score: 101.418
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 188..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18641-RA	Carg18641-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity