Carg18396 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18396
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	dr1-associated corepressor-like
Location	Carg_Chr20: 644347 .. 647700 (-)
RNA-Seq Expression	Carg18396
Synteny	Carg18396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCTTCAACATCATGAAGAAGAAGCTCGATACCCGTTTTCCAGCCGTGAGCTCTCTTTTTCTGTTGCCTTTTCCGACTGTCTTTCTTTTTATTTTTTTTCGCGCTATTTATCTCATACTGATTTGATTATTTGTCTTGAGTGCCACTGTTTGTGTATATTCTTTATAATTGGGCCGTCGAAATGTATGGTAGCAACAGTTTCCATTTTCGGCCATGGTGGGGTTGGGATTTCGACTTTTTGTTCCGACATGTTATTGTATGTTCTCTTGTTGAGGATGAAGTGTTAATTAGGTCATCATGTCTCATATGTGATGGAAGCAGTTTTGTTTATTTATTCTTTTTTTTTTTTCTCCTAAAGATGATGCCACTAAAACATTTTACCCTATGCACTGTTCCAATAGTTAAAATATGTACAGTGGCGTCGCTTTAATGCGTTTGTTGCTTTGAGAAATAGTTTTATTGAAGGTAATGAACACGGAGAACAACTTGAATGTGAAATTTCTCCATAAAATCTATTGCAAAACGGGCATAGTTTGTTGGAGGAATTATGCCTATGGAAGATGTACCATATAGGTTTTACAGCTTGACTTTATGGTGTTATTTGCTTATTCATTTTTCTTTTCAGAATCTTTGAGATCGTTGTTTTTTCAAATAACCCTTAACTTGACAAGATGTTTGGAAGTGTTTGTTTGAACAATTTTTTATAAAGTGACAAAACTTGTTATTGAGTGCCTCCTATGATCCTAAAGGTAGTTTGTGAACAGACAACCCCGTAATGAAGGATTCAGAAACTCCTGCCTCCTGCAGAGAATGCACCATTACAGGAGCAAAATGAATGGAAATATCTTTGAACATGATCCAAGAAATTAACTCTCCCACCTTAATCATATTTGGAATTTTAGCTTTCCATAAAAGGAAAAAAAAAAAAAACAGCTGAAGCCTCGAGCAGCCGTCAAAGCAGGAGGAAAGATAAAATGTGAACATAGGAATGGCAGGGAACCCTGCTGGAAGGATCAGGGTCCAATCCTAACATCCCTTCTCGGAAAAATAAACGACACACGAACACGCTTGATTTGCACTACCGAAAGAATTCTTGTGCATCTGTTTGGTTAGTTTTCACTCTCCTTGTGAGACACCAAGTTCCATGCCAATGTAGCATCACGCCAACACATTAGTTGATTTATGGTCTCGACAATCAGATGTGTTCTTTTATCACATTTGAATTAGCTTCATGGTTGTTTTTTATTCTTTAACTATTTGAACCTTGTTGTGATCTTTGATTATGAAAGTCGATACAAATAATTTCTATTCATTTTTCCTGTCTGCCTCCAGTGAGTTTTCTTGTGTTCCTTATGCAGTATGATCCTTGTCTGTGGATTTGTGATGGTTCTTCAGGGTGTCTCTTGATTTTGTGTTGAAGTTGGAACTCTCTGTCTTATTTGATTTTTGATATATCAACAAAATAGTTGTCTAGTCTATATCTCAGCAACTGCTTGCTGGTCGTCCCTCTATAGCATTGATAACCTGAGTATTCTGTAACATTTACAGGCTCGGATTAAGAAGATTATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTGTAAGTACCAACTACCAAATAATGTGATAATTCCCTAGTTGGAGATTGTTACTTGCTTAGGATTGTGCTAGGTACTCTAGAATATATTCAAATGTGAAATAAGAAAATTGGTGAAGATCACCATACAGGATATCAAGCCGTTTGAGAGGGCTGAAAACTCTTCTCACGATTGGTCCTTACCCAAAAAGATAATGATGTCTTTGCATGATCTCCTCCCATATATTCTTCATGCCAAGCTACTAATTGAAAGCAGTTCAATCTCCCTAATTACCCTTCCTATCATAAACACACACAACTGGGGGCTGGGTTGTTTTTGTTTCTTCTCCAAAATGTTGTTTCTAGAATGTGCTCTAGTATGTTGATTATTCTGTTGTTTTTGCAGCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTGTTAGTAAACTCTCAATTATTGAATTTTGGACATTCCGAGATTTTGTAAATAGGATGTACTTAATTCAACTATCAGTCTACCACTTCTCGATTATGCCATATTGATGTTCAATAGAAAGCCATTGACGGTTCTTTCAAGCCTCTAGGCTCCAGCCTCCAACTATTGATCTAATCTTATTGTTGAGAAAAATGAAATGAGTTTCTTCTTTTATTTCGTCTCAGTCTAAGTGCCATGAAGGAAAAAACAGTTTAATTTTATAGTTTTACCTCTGCTGTTGCCTACCACATTACTTTCTCACACATTCATTGAATTGACAGAAAACAATGCATACAGACGTTTAATGTATTTGATTTCTTGAGGGATGTTGTTGGCAAGGTACCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTCGAAACGAAGGTTTGGAAAATAAATGTCTCTCTAGTTGGGTGTAGTGATATATGAGGTATTCATCTTTGATAGTATTTGTGGTTTTTTTCTTTTTGGTCCAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGGTAAGAATTATTTTCAAAACACATATTTGTGTATCTTGTACTTCGGAAAAACAAAACACGTATTCATGTATCTTGTACTTCGGATAAACAAAACCCATACAGCAATTATGAGATTGTGCTCATTTCATTGCGGTATACCCCTGTTGCAGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTGGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGACAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTCAACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCTGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCCGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAGTTATATTAGGATCCTCTTTTTCTATGGATGAGCAATTTGATTCTTTTGCCGCT

mRNA sequence

AGTTCTTCAACATCATGAAGAAGAAGCTCGATACCCGTTTTCCAGCCGCTCGGATTAAGAAGATTATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTAAAACAATGCATACAGACGTTTAATGTATTTGATTTCTTGAGGGATGTTGTTGGCAAGGTACCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTCGAAACGAAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTGGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGACAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTCAACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCTGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCCGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAGTTATATTAGGATCCTCTTTTTCTATGGATGAGCAATTTGATTCTTTTGCCGCT

Coding sequence (CDS)

ATGAAGAAGAAGCTCGATACCCGTTTTCCAGCCGCTCGGATTAAGAAGATTATGCAGGCTGATGAAGACGTAGGGAAGATTGCTATGGCAGTCCCACTTTTAGTCTCAAAAGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATTACTCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTAAAACAATGCATACAGACGTTTAATGTATTTGATTTCTTGAGGGATGTTGTTGGCAAGGTACCTGATTTAGGTGCCTCTGATGCTGCGGAGGACCGTTGTATTTCGAAACGAAGGAAAGTTGAAGATGAAGATGGTGGTAATGATAGTGAAGAAGAGTCCAAAAGGAGTAAGACGACAGAGGCTGGTCACAACATTAGTGGCCGAGGAAGGGGTAGAGGCAGAGGTAGAGGTCGTGGGCGTAGTAGTAGGCATTCGGAGAAGGATACAGCCATACATTCTGATAACTTGGAAGAAGATTTGGAAATTCCTAGTCATCCTGGCGACAACCTCGACAAAACTGTGGCAGACAACGGTGTAGCAGAAGCTCGAATGGAGAACGACAATATTCCTATTGACAAAGCTGTAGAACCATCAGTCCGAAACTTCGACTTGAACGTAAACTTGGACGAAGATGGGGACTCAACTTCAATTCCAGTGGCTGCTTCTACAGGTTCACCAGTAAAGCCCCTGACTGACTCGAAACACGACGAGTATCCTGGTTGGTCAGTGGCCGAAATGGAAAAGATGGTTATCGATCCAATTCAACTAGCGAATTTGAATAAGAGTATAGATGATGAGGAAGATTATGACGAAGAAGGTTAG

Protein sequence

MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESKRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKTVADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG

Homology

[Close]

BLAST of Carg18396 vs. NCBI nr
Match: XP_022943975.1 (dr1-associated corepressor-like [Cucurbita moschata] >KAG6570454.1 Dr1-associated corepressor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010316.1 Dr1-associated corepressor [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.8 bits (1392), Expect = 6.9e-150
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT
Sbjct: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
           VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS
Sbjct: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. NCBI nr
Match: XP_022986743.1 (dr1-associated corepressor-like [Cucurbita maxima] >XP_022986744.1 dr1-associated corepressor-like [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 3.2e-147
Identity = 276/280 (98.57%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCI KRRKVEDEDGGNDSEEES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDN EEDLEIPSHPGDNLDKT
Sbjct: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
           VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGD TSIPVAASTGSPVKP TDS
Sbjct: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. NCBI nr
Match: XP_023512169.1 (dr1-associated corepressor-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 7.2e-147
Identity = 274/280 (97.86%), Postives = 277/280 (98.93%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDN EEDLEIPSHPG+NL+KT
Sbjct: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGNNLEKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
           + DNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTS PVAASTGSPVKPLTDS
Sbjct: 181 MPDNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSTPVAASTGSPVKPLTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. NCBI nr
Match: XP_023512170.1 (dr1-associated corepressor-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 257/263 (97.72%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 18  MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVF 77
           MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVF
Sbjct: 1   MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVF 60

Query: 78  DFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESKRSKTTEAGHNISGRGR 137
           DFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESKRSKTTEAGHNISGRGR
Sbjct: 61  DFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESKRSKTTEAGHNISGRGR 120

Query: 138 GRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKTVADNGVAEARMENDNIP 197
           GRGRGRGRGRSSRHSEKDTAIHSDN EEDLEIPSHPG+NL+KT+ DNGVAEARMENDNIP
Sbjct: 121 GRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGNNLEKTMPDNGVAEARMENDNIP 180

Query: 198 IDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDSKHDEYPGWSVAEMEKMV 257
           IDKAVEPSVRNFDLNVNLDEDGDSTS PVAASTGSPVKPLTDSKHDEYPGWSVAEMEKMV
Sbjct: 181 IDKAVEPSVRNFDLNVNLDEDGDSTSTPVAASTGSPVKPLTDSKHDEYPGWSVAEMEKMV 240

Query: 258 IDPIQLANLNKSIDDEEDYDEEG 281
           IDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 IDPIQLANLNKSIDDEEDYDEEG 263

[Close]

BLAST of Carg18396 vs. NCBI nr
Match: XP_008449610.1 (PREDICTED: dr1-associated corepressor-like isoform X1 [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 7.2e-131
Identity = 247/280 (88.21%), Postives = 262/280 (93.57%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LCDRTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCDRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDAAEDR ISKRRKV DED GNDS+EES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAEDRHISKRRKVADEDVGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH +N E+DLEIP+HP D+L KT
Sbjct: 121 KRSKVTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYNNFEDDLEIPNHPDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGDSTS+PV ASTGSPVKP TDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSVPVVASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDE+G
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANMNETIDDEEDYDEDG 280

[Close]

BLAST of Carg18396 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-21
Identity = 69/176 (39.20%), Postives = 98/176 (55.68%), Query Frame = 0


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHMDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIP---SHP 174
           R  K+  +G    G G      +  G  S   ++     SD  EE  ++P   SHP
Sbjct: 125 RGRKSGSSGRKNGGMGSKGKDKKLSGTDSEQEDESEDTDSDGEEETPQVPPQASHP 165

[Close]

BLAST of Carg18396 vs. ExPASy Swiss-Prot
Match: A0JPP1 (Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.3e-21
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHTDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIP---SHP 174
           R  K   +G    G G      +  G  S   ++     +D  EE  + P   SHP
Sbjct: 125 RGRKPGSSGRKNGGTGSKSKDKKLSGTDSEQEDESEDTDTDGEEETPQAPPQASHP 165

[Close]

BLAST of Carg18396 vs. ExPASy Swiss-Prot
Match: Q9D6N5 (Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 8.2e-21
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHVDGDKGPR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIP---SHP 174
           R  K   +G    G G      +  G  S   ++     +D  EE  ++P   SHP
Sbjct: 125 RGRKPGSSGRKNGGTGSKGKDKKLSGTDSEQEDESEDTDTDGEEETPQLPPQASHP 165

[Close]

BLAST of Carg18396 vs. ExPASy Swiss-Prot
Match: Q14919 (Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 2   KKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKT 61
           KKK + RFP ARIKKIMQ DE++GK+A AVP+++S+ALELFL+ L  +  ++T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEESK 121
           M + HLKQCI+    FDFL+D+V  VPD+               + + ED   D ++ ++
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDM---------------QGDGEDNHMDGDKGAR 124

Query: 122 RS-KTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIP---SHP 174
           R  K    G    G G      +  G  S   ++     +D  EE  + P   SHP
Sbjct: 125 RGRKPGSGGRKNGGMGTKSKDKKLSGTDSEQEDESEDTDTDGEEETSQPPPQASHP 165

[Close]

BLAST of Carg18396 vs. ExPASy Swiss-Prot
Match: Q54DA1 (Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.3e-20
Identity = 70/178 (39.33%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKK  T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL  +T +IT  +  K
Sbjct: 1   MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGG------- 120
            ++  HLK+CI+  + FDFL ++V ++PD    D  E R   + +K E EDGG       
Sbjct: 61  VISVNHLKECIKQESTFDFLTEIVDRIPD----DKNEKR--GRPKKTEGEDGGEEEEEEE 120

Query: 121 -----------------NDSEEESKRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEK 155
                            +DS+EE + +       +  G+G   GRG  RG +S    K
Sbjct: 121 EEMDMGEEEEEEEDEDDDDSDEEEEEAPKKGGKGSRGGKGSRGGRGGARGGASTRKVK 172

[Close]

BLAST of Carg18396 vs. ExPASy TrEMBL
Match: A0A6J1FYE3 (dr1-associated corepressor-like OS=Cucurbita moschata OX=3662 GN=LOC111448540 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.3e-150
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT
Sbjct: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
           VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS
Sbjct: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. ExPASy TrEMBL
Match: A0A6J1JHF3 (dr1-associated corepressor-like OS=Cucurbita maxima OX=3661 GN=LOC111484411 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.6e-147
Identity = 276/280 (98.57%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCI KRRKVEDEDGGNDSEEES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCILKRRKVEDEDGGNDSEEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDN EEDLEIPSHPGDNLDKT
Sbjct: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNFEEDLEIPSHPGDNLDKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
           VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGD TSIPVAASTGSPVKP TDS
Sbjct: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDLTSIPVAASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. ExPASy TrEMBL
Match: A0A1S3BMF4 (dr1-associated corepressor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491444 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.5e-131
Identity = 247/280 (88.21%), Postives = 262/280 (93.57%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LCDRTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCDRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDAAEDR ISKRRKV DED GNDS+EES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAEDRHISKRRKVADEDVGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH +N E+DLEIP+HP D+L KT
Sbjct: 121 KRSKVTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYNNFEDDLEIPNHPDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGDSTS+PV ASTGSPVKP TDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSVPVVASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDE+G
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANMNETIDDEEDYDEDG 280

[Close]

BLAST of Carg18396 vs. ExPASy TrEMBL
Match: A0A0A0KI73 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G426970 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.9e-131
Identity = 248/280 (88.57%), Postives = 261/280 (93.21%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LC+RTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCNRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           T+NSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDA EDR ISKRRKV DEDGGNDS+EES
Sbjct: 61  TLNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAVEDRHISKRRKVADEDGGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH DN E+DLEIP H  D+L KT
Sbjct: 121 KRSKMTEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYDNFEDDLEIPDHLDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKP TDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDEEG
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANINETIDDEEDYDEEG 280

[Close]

BLAST of Carg18396 vs. ExPASy TrEMBL
Match: A0A1S3BME7 (dr1-associated corepressor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491444 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 247/280 (88.21%), Postives = 262/280 (93.57%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQ+LCDRTYEITLKRGA+
Sbjct: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQNLCDRTYEITLKRGAR 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLG SDAAEDR ISKRRKV DED GNDS+EES
Sbjct: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAEDRHISKRRKVADEDVGNDSDEES 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNLDKT 180
           KRSK TEAGH ISGRGRGRGRGRGRGRSSRH EKDTAIH +N E+DLEIP+HP D+L KT
Sbjct: 121 KRSK-TEAGHCISGRGRGRGRGRGRGRSSRHLEKDTAIHYNNFEDDLEIPNHPDDDLHKT 180

Query: 181 VADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKPLTDS 240
             DNGVAEAR+ENDN  +DKA+EPSVRNFDLNVNLDEDGDSTS+PV ASTGSPVKP TDS
Sbjct: 181 EPDNGVAEARVENDNTLVDKALEPSVRNFDLNVNLDEDGDSTSVPVVASTGSPVKPPTDS 240

Query: 241 KHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEEG 281
           KHDEYPGWSVAEMEKM IDPIQLAN+N++IDDEEDYDE+G
Sbjct: 241 KHDEYPGWSVAEMEKMAIDPIQLANMNETIDDEEDYDEDG 279

[Close]

BLAST of Carg18396 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-60
Identity = 158/313 (50.48%), Postives = 194/313 (61.98%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           M+KKLDTRFPAARIKKIMQADEDVGKIA+AVP+LVSK+LELFLQDLCDRTYEITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASD-------AAEDRCISKRRK-VEDEDG 120
           T++SLHLK C++ +NVFDFLR+VV KVPD G S          +DR ISKRRK + DE  
Sbjct: 61  TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDE-- 120

Query: 121 GNDSEEESKRSKTTEAGH-NISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPS 180
            NDS+EE K+SKT E G    SGRG GRGRGRGRGR  R ++   A   + L  ++E+ +
Sbjct: 121 VNDSDEEYKKSKTQEIGSAKTSGRG-GRGRGRGRGRGGRAAK---AAEREGLNREMEVEA 180

Query: 181 ------HPGDN-----------------LDKTVADNGVAEARMENDNIPIDKAVEPSVRN 240
                  P DN                 +D T A N   +  +++    ID         
Sbjct: 181 ANSGQPPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGID--------- 240

Query: 241 FDLNVNLDEDGDSTSIPVAASTGSPVKPLTDSKHDEYPGWSVAEMEKMVIDPIQLANLNK 281
           FDLN    E  D     +A +TG+       +  +EY GW + ++ KM  DP QLA+L K
Sbjct: 241 FDLNA---ESLDLNETKLAPATGTTTTTTAATDSEEYSGWPMMDISKM--DPAQLASLGK 293

[Close]

BLAST of Carg18396 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 7.6e-54
Identity = 142/283 (50.18%), Postives = 171/283 (60.42%), Query Frame = 0


Query: 1   MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK 60
           MKKKL TRFPA RIKKIMQ DE+VGKIAMAVPLLVSKALELFLQDLC+ TY++TL RGAK
Sbjct: 1   MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK 60

Query: 61  TMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGASDAAEDRCISKRRKVEDEDGGNDSEEES 120
           T+N+ HLKQC+Q  NVFDFLRD V KVPDLG SD  ED+  +KRRKV D    ND E+  
Sbjct: 61  TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSD-TEDQSATKRRKVVDGSSCND-EDMI 120

Query: 121 KRSKTTEAGHNISGRGRGRGRGRGRGRSSRHSEKDTAIHSDNLEEDLEIPSHPGDNL--- 180
           K ++  E  H   GRGR   RGRGRGRSS  +    ++     EEDLE  S         
Sbjct: 121 KTTQMHEVKHTSCGRGR---RGRGRGRSSGRTGSGLSL---KFEEDLEDGSPESSRTPSP 180

Query: 181 -DKTVADNGVAEARMENDNIPIDKAVEPSVRNFDLNVNLDEDGDSTSIPVAASTGSPVKP 240
            + +++ +  +  ++ + N       E  VRNFDLNV LDE+GD+ +        SP  P
Sbjct: 181 ENGSLSHDDTSWKKVASHNNHHSSNSEVKVRNFDLNVELDENGDNATWLETQLERSPDYP 240

Query: 241 LTDSKHDEYPGWSVAEMEKMVIDPIQLANLNKSIDDEEDYDEE 280
           L              E+ +M IDP        S  DEEDYDEE
Sbjct: 241 L--------------EINEMKIDPDD--QQQASASDEEDYDEE 259

[Close]

BLAST of Carg18396 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-09
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 8   RFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 68  KQCIQTFNVFDFLRDVVGKVPDLGASDAA 97
              I   ++FDFL D+V +       DAA
Sbjct: 138 AAAITRTDIFDFLVDIVPREEIKEEEDAA 166

[Close]

BLAST of Carg18396 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 60.5 bits (145), Expect = 2.6e-09
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 8   RFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 68  KQCIQTFNVFDFLRDVVGKVPDLGASDAA 97
              I   ++FDFL D+V +       DAA
Sbjct: 138 AAAITRTDIFDFLVDIVPREEIKEEEDAA 166

[Close]

BLAST of Carg18396 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 58.9 bits (141), Expect = 7.4e-09
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 8   RFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 68  KQCIQTFNVFDFLRDVV 85
              I   ++FDFL D+V
Sbjct: 125 AAAITRTDIFDFLVDIV 141

The following BLAST results are available for this feature:

BLAST of Carg18396 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943975.1	6.9e-150	100.00	dr1-associated corepressor-like [Cucurbita moschata] >KAG6570454.1 Dr1-associate...	[more]
XP_022986743.1	3.2e-147	98.57	dr1-associated corepressor-like [Cucurbita maxima] >XP_022986744.1 dr1-associate...	[more]
XP_023512169.1	7.2e-147	97.86	dr1-associated corepressor-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023512170.1	1.8e-137	97.72	dr1-associated corepressor-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_008449610.1	7.2e-131	88.21	PREDICTED: dr1-associated corepressor-like isoform X1 [Cucumis melo]	[more]

BLAST of Carg18396 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2YDP3	1.3e-21	39.20	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]
A0JPP1	6.3e-21	38.64	Dr1-associated corepressor OS=Rattus norvegicus OX=10116 GN=Drap1 PE=2 SV=1	[more]
Q9D6N5	8.2e-21	38.64	Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=3	[more]
Q14919	1.1e-20	38.64	Dr1-associated corepressor OS=Homo sapiens OX=9606 GN=DRAP1 PE=1 SV=3	[more]
Q54DA1	5.3e-20	39.33	Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1...	[more]

BLAST of Carg18396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYE3	3.3e-150	100.00	dr1-associated corepressor-like OS=Cucurbita moschata OX=3662 GN=LOC111448540 PE...	[more]
A0A6J1JHF3	1.6e-147	98.57	dr1-associated corepressor-like OS=Cucurbita maxima OX=3661 GN=LOC111484411 PE=4...	[more]
A0A1S3BMF4	3.5e-131	88.21	dr1-associated corepressor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034914...	[more]
A0A0A0KI73	5.9e-131	88.57	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4269...	[more]
A0A1S3BME7	1.1e-129	88.21	dr1-associated corepressor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034914...	[more]

BLAST of Carg18396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12480.1	1.9e-60	50.48	nuclear factor Y, subunit C11	[more]
AT5G19490.1	7.6e-54	50.18	Histone superfamily protein	[more]
AT5G63470.1	2.6e-09	38.20	nuclear factor Y, subunit C4	[more]
AT5G63470.2	2.6e-09	38.20	nuclear factor Y, subunit C4	[more]
AT3G48590.1	7.4e-09	40.26	nuclear factor Y, subunit C1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 8..71 e-value: 1.4E-18 score: 66.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 1..72 e-value: 1.6E-28 score: 100.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..241
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 1..279
None	No IPR available	PANTHER	PTHR10252:SF98	HISTONE SUPERFAMILY PROTEIN	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18396-RA	Carg18396-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity