Carg18146 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGCAAGGTTGAGAAAAAGGAGAATGAAGCTAGCAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGGTGAGTTTTATATCTACCACCGTTCTTCCTCTTGTTGCTGTCTGTTTTTCATATCCAACCCATAAAATTCTTGAAATCTCTTAATTTTTTAGTCTCAATTTGAATTAATGGCTTCATATTCTTTGTGGGTTTCAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCGCCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGTGAATTTTTTAACAAACATCAAAACAATTCTTAACTTTGAAGGGAGTTCTTTTGACGATCGATTTAATTATAATTGTTTGTAAACGACTGCATCATTTTTGTAGGCGACCAAACACGAGAAGAACAACAGACCAAGAACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGGTAGCTAATCATTTATGTTCCCTATTTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTCCAAGGCTCTTTAAAC ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGCAAGGTTGAGAAAAAGGAGAATGAAGCTAGCAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCGCCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGAACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGGTAGCTAATCATTTATGTTCCCTATTTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTCCAAGGCTCTTTAAAC ATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGCAAGGTTGAGAAAAAGGAGAATGAAGCTAGCAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCGCCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGAACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGGTAGCTAA MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNNETSKVEKKENEASKVEKKENEASKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAAAAAAGRSVSEDPFQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEAGS Homology
BLAST of Carg18146 vs. NCBI nr
Match: KAG6587486.1 (hypothetical protein SDJN03_16051, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021473.1 hypothetical protein SDJN02_15198, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384.0 bits (985), Expect = 8.3e-103 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg18146 vs. NCBI nr
Match: XP_022933525.1 (uncharacterized protein LOC111440926 isoform X1 [Cucurbita moschata]) HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg18146 vs. NCBI nr
Match: XP_023529445.1 (uncharacterized protein LOC111792303 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Carg18146 vs. NCBI nr
Match: XP_022965761.1 (uncharacterized protein LOC111465553 isoform X1 [Cucurbita maxima]) HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Carg18146 vs. NCBI nr
Match: XP_022933526.1 (uncharacterized protein LOC111440926 isoform X2 [Cucurbita moschata]) HSP 1 Score: 359.8 bits (922), Expect = 1.7e-95 Identity = 205/215 (95.35%), Postives = 205/215 (95.35%), Query Frame = 0
BLAST of Carg18146 vs. ExPASy TrEMBL
Match: A0A6J1F544 (uncharacterized protein LOC111440926 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440926 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg18146 vs. ExPASy TrEMBL
Match: A0A6J1HMJ8 (uncharacterized protein LOC111465553 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465553 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Carg18146 vs. ExPASy TrEMBL
Match: A0A6J1EZA8 (uncharacterized protein LOC111440926 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440926 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 8.1e-96 Identity = 205/215 (95.35%), Postives = 205/215 (95.35%), Query Frame = 0
BLAST of Carg18146 vs. ExPASy TrEMBL
Match: A0A6J1HRW5 (uncharacterized protein LOC111465553 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465553 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 3.1e-95 Identity = 203/215 (94.42%), Postives = 203/215 (94.42%), Query Frame = 0
BLAST of Carg18146 vs. ExPASy TrEMBL
Match: A0A0A0LRI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005650 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.3e-74 Identity = 168/215 (78.14%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Carg18146 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29 Identity = 92/215 (42.79%), Postives = 113/215 (52.56%), Query Frame = 0
BLAST of Carg18146 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28 Identity = 88/215 (40.93%), Postives = 117/215 (54.42%), Query Frame = 0
BLAST of Carg18146 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 121.7 bits (304), Expect = 7.2e-28 Identity = 87/215 (40.47%), Postives = 107/215 (49.77%), Query Frame = 0
BLAST of Carg18146 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23 Identity = 81/216 (37.50%), Postives = 109/216 (50.46%), Query Frame = 0
BLAST of Carg18146 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21 Identity = 79/217 (36.41%), Postives = 104/217 (47.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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