Carg18054 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGTAGAATTACTAGACAGCGCCACCGTAGTGAGCTTCGTGGAGGACGAGGAAGCCTTCGGCGCCGCCATTAGGGAGCGTTTCAGGCGCCTCGATGTGGACGGCGATGGCGCGCTGTCGTACACAGAGATGTTGAAGGAGTTTGGAAGCGATGAGGTTTGTTGTGCGTACGAAAGTGAGTCGAATGGAAAAGTTGATTTGGAGAAGTTCATGAGGGGAATGAAGAAGATGATGATGGCCATTGCTGAGGGATTAGGGTTCTTGCCGATTCATATGGCGCTGCAAAAAGATGGGTTGTTGATGAAAGCTGTTCAGAGAGAAGCCGCTGCCATGGTAGATGCTTGA ATGAGCGTAGAATTACTAGACAGCGCCACCGTAGTGAGCTTCGTGGAGGACGAGGAAGCCTTCGGCGCCGCCATTAGGGAGCGTTTCAGGCGCCTCGATGTGGACGGCGATGGCGCGCTGTCGTACACAGAGATGTTGAAGGAGTTTGGAAGCGATGAGGTTTGTTGTGCGTACGAAAGTGAGTCGAATGGAAAAGTTGATTTGGAGAAGTTCATGAGGGGAATGAAGAAGATGATGATGGCCATTGCTGAGGGATTAGGGTTCTTGCCGATTCATATGGCGCTGCAAAAAGATGGGTTGTTGATGAAAGCTGTTCAGAGAGAAGCCGCTGCCATGGTAGATGCTTGA ATGAGCGTAGAATTACTAGACAGCGCCACCGTAGTGAGCTTCGTGGAGGACGAGGAAGCCTTCGGCGCCGCCATTAGGGAGCGTTTCAGGCGCCTCGATGTGGACGGCGATGGCGCGCTGTCGTACACAGAGATGTTGAAGGAGTTTGGAAGCGATGAGGTTTGTTGTGCGTACGAAAGTGAGTCGAATGGAAAAGTTGATTTGGAGAAGTTCATGAGGGGAATGAAGAAGATGATGATGGCCATTGCTGAGGGATTAGGGTTCTTGCCGATTCATATGGCGCTGCAAAAAGATGGGTTGTTGATGAAAGCTGTTCAGAGAGAAGCCGCTGCCATGGTAGATGCTTGA MSVELLDSATVVSFVEDEEAFGAAIRERFRRLDVDGDGALSYTEMLKEFGSDEVCCAYESESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGLLMKAVQREAAAMVDA Homology
BLAST of Carg18054 vs. NCBI nr
Match: KAG7022828.1 (hypothetical protein SDJN02_16564, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 223.0 bits (567), Expect = 1.3e-54 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Carg18054 vs. NCBI nr
Match: XP_022930694.1 (uncharacterized protein LOC111437091 [Cucurbita moschata] >XP_023530313.1 uncharacterized protein LOC111792919 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of Carg18054 vs. NCBI nr
Match: KAG6589126.1 (hypothetical protein SDJN03_17691, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Carg18054 vs. NCBI nr
Match: XP_038887184.1 (uncharacterized protein LOC120077371 [Benincasa hispida]) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28 Identity = 77/132 (58.33%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Carg18054 vs. NCBI nr
Match: XP_008455505.1 (PREDICTED: uncharacterized protein LOC103495656 [Cucumis melo] >KAA0059136.1 uncharacterized protein E6C27_scaffold430G00460 [Cucumis melo var. makuwa] >TYK21611.1 uncharacterized protein E5676_scaffold150G00080 [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 1.0e-27 Identity = 76/132 (57.58%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Carg18054 vs. ExPASy TrEMBL
Match: A0A6J1ES74 (uncharacterized protein LOC111437091 OS=Cucurbita moschata OX=3662 GN=LOC111437091 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.4e-54 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of Carg18054 vs. ExPASy TrEMBL
Match: A0A5A7UY59 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00080 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.1e-28 Identity = 76/132 (57.58%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Carg18054 vs. ExPASy TrEMBL
Match: A0A1S3C0M6 (uncharacterized protein LOC103495656 OS=Cucumis melo OX=3656 GN=LOC103495656 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.1e-28 Identity = 76/132 (57.58%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Carg18054 vs. ExPASy TrEMBL
Match: A0A6J1C2T1 (uncharacterized protein LOC111007741 OS=Momordica charantia OX=3673 GN=LOC111007741 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27 Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 0
BLAST of Carg18054 vs. ExPASy TrEMBL
Match: A0A438IL73 (EF-hand domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_026186 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of Carg18054 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 81.6 bits (200), Expect = 4.4e-16 Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 0
BLAST of Carg18054 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 48.5 bits (114), Expect = 4.1e-06 Identity = 32/119 (26.89%), Postives = 62/119 (52.10%), Query Frame = 0
BLAST of Carg18054 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04 Identity = 32/116 (27.59%), Postives = 56/116 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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