Carg17918 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17918
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr10: 1078289 .. 1078906 (+)
RNA-Seq Expression	Carg17918
Synteny	Carg17918

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAAAGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

mRNA sequence

ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAAAGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

Coding sequence (CDS)

ATGGAAGCCTGTGTTGACAGCAGGAAGCGGCTACGGGATGAATCCAAAGATTCTCTCTTCAATTTTATCGGATCCAACTCTAAGTTCGTCCGACTTGATTCCGCTAACTTGGATGTGGATGATGCGCCGATTGCTTCCGTTTCATCGGATGCGAAATCGATCGATTCGTTTCAGGCAAACTTAATTCAGGATGACCTGCTGAAGATTCTCGACGACGTCGATGCTTACATAGATCGCGAGTCGGAGATTCAAGATCTCGACTCGGTGATTAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTTCCTTCTGTTCAGCCCGAACTTGGATTCCTTCTGGAAGCGTCGGACGATGAATTAGGGCTTCCGCCGGCTGGTGAGAAAGAGGAGACCGAGGCCGTTAACTTCGCGGCAGAGTTTTTAGGTAGCGGCGGTATGAAAGGAATTTTAGGGCTTGAGGATGAAACTGTTCCGAATTACTGTTGGCTTGAGAATTTGAGGAGTGAGAACGAATGGAATCGAGAGGAGGAGGAAGAGGTGGTGGTGTTGGGTGGATTGTTCGATCATACAGACGTGGCGACGGAATTGGCGTATCGATCGGAGACCATGCCTTGTTTATAA

Protein sequence

MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVVVLGGLFDHTDVATELAYRSETMPCL

Homology

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BLAST of Carg17918 vs. NCBI nr
Match: KAG7023238.1 (hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

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BLAST of Carg17918 vs. NCBI nr
Match: XP_022921385.1 (uncharacterized protein LOC111429674 [Cucurbita moschata])

HSP 1 Score: 396.0 bits (1016), Expect = 2.0e-106
Identity = 202/205 (98.54%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDES DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPS QPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSG MKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

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BLAST of Carg17918 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-105
Identity = 203/210 (96.67%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI-----D 60
           MEACVDSRKRLRDES DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI     D
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSSGLD 60

Query: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120
           SFQANLIQDDLLKILDDVDAYIDRE EIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS
Sbjct: 61  SFQANLIQDDLLKILDDVDAYIDRELEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120

Query: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREE 180
           DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREE
Sbjct: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREE 180

Query: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 206
           EEEVVVLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 210

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BLAST of Carg17918 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 2.5e-104
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSI-----D 60
           MEACVDSRKRLRDES DSLFNFIGSNSKFVRLDSANLDVDDAP ASVSSDAKSI     D
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPNASVSSDAKSIDSSGLD 60

Query: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120
           SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS
Sbjct: 61  SFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEAS 120

Query: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREE 180
           DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDE+VPNYCWLENLRSENEW+REE
Sbjct: 121 DDELGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDESVPNYCWLENLRSENEWSREE 180

Query: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 206
           EEEVVVLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 EEEVVVLGGLFDHTDVATELAYRSETMPCL 210

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BLAST of Carg17918 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida])

HSP 1 Score: 281.2 bits (718), Expect = 7.2e-72
Identity = 155/209 (74.16%), Postives = 172/209 (82.30%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLD-SANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRL D+S DSLFN+IGSNSKF+RL+ SA+L+  DAP+A  S D+  +DSFQA
Sbjct: 1   MEPCVDTRKRLWDDSNDSLFNYIGSNSKFLRLENSADLNF-DAPVAK-SIDSSGLDSFQA 60

Query: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDEL 120
           + IQ+DLLKILDD +A IDRES I+DLDSVIRSFEKEI+VPVP VQPELGFLLEASDDEL
Sbjct: 61  HAIQEDLLKILDDTEASIDRESAIEDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDEL 120

Query: 121 GLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSE-NEWNREEEEE 180
           GLPPAGEK E E  N     LGSGG+KGILG EDE V NYCW ENLRSE  EW+ E EEE
Sbjct: 121 GLPPAGEKGEIEGGN-----LGSGGLKGILGFEDENVSNYCWFENLRSEIKEWSPEGEEE 180

Query: 181 VVVLGGLFDHTDVATEL--AYRSETMPCL 206
           VV LGGLFDHTDVA EL  AYRSETMPCL
Sbjct: 181 VVALGGLFDHTDVAAELPTAYRSETMPCL 202

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BLAST of Carg17918 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.8e-107
Identity = 202/205 (98.54%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60
           MEACVDSRKRLRDES DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQAN 60

Query: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDELG 120
           LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPS QPELGFLLEASDDELG
Sbjct: 61  LIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSGQPELGFLLEASDDELG 120

Query: 121 LPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180
           LPPAGEKEETEAVNFAAEFLGSG MKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV
Sbjct: 121 LPPAGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVV 180

Query: 181 VLGGLFDHTDVATELAYRSETMPCL 206
           VLGGLFDHTDVATELAYRSETMPCL
Sbjct: 181 VLGGLFDHTDVATELAYRSETMPCL 205

[Close]

BLAST of Carg17918 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.8e-68
Identity = 149/210 (70.95%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESK-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+S  DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 80

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP VQPELGFLLEASDDE
Sbjct: 81  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 140

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSGG+KG+LG EDE V NYCW +NLR E  EW+ EEEE
Sbjct: 141 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWSPEEEE 200

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 201 EVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of Carg17918 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 149/210 (70.95%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESK-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+S  DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 80

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP VQPELGFLLEASDDE
Sbjct: 81  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 140

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSGG+KG+LG EDE V NYCW +NLR E  EW  EEEE
Sbjct: 141 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEE 200

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 201 EVVALGGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of Carg17918 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 149/210 (70.95%), Postives = 166/210 (79.05%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESK-DSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA 60
           ME CVD+RKRLRD+S  DSLFN IGS+SKF+RL++      DAP+      ++S DSFQ+
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPV------SQSTDSFQS 60

Query: 61  -NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSVQPELGFLLEASDDE 120
            + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VPVP VQPELGFLLEASDDE
Sbjct: 61  HHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVPVVQPELGFLLEASDDE 120

Query: 121 LGLPPAGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSE-NEWNREEEE 180
           LGLPPAGEKEE E     AEF GSGG+KG+LG EDE V NYCW +NLR E  EW  EEEE
Sbjct: 121 LGLPPAGEKEEIE----EAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEE 180

Query: 181 EVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EVVALGGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of Carg17918 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.7e-64
Identity = 148/214 (69.16%), Postives = 163/214 (76.17%), Query Frame = 0


Query: 1   MEACVDSRKRLRDESKDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA- 60
           ME  +DSRKRLRD+S DSLFN IGSNSKF+RL++      DAP+      + S DSF + 
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPV------SHSTDSFHSH 60

Query: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP----VPSVQPELGFLLEAS 120
           + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VP    VP VQPELGFLLEAS
Sbjct: 61  HTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEAS 120

Query: 121 DDELGLPP-AGEKEETEAVNFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSE-NEWNR 180
           DDELGLPP AGEKEE E     AEF GSGG+KG LG EDE V NYCW +NLR E  EW+ 
Sbjct: 121 DDELGLPPAAGEKEEIE----EAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWST 180

Query: 181 EEEEEVVVLGGLFDHTDVATEL--AYRSETMPCL 206
           EEEEEVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of Carg17918 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 67/197 (34.01%), Postives = 94/197 (47.72%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------VQPELGFLLEASDDELGLPP---------AGEKEETE 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP         A E+  TE
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 AV-NFAAEFLGSGGMKGILGLEDETVPNYCWLENLRSENEWNREEEEEVVVLGGLFDHTD 204
            V +       S G+  I G ED  V NY  L+      +       + V + GLF+ +D
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLDFGSGVGDGG-----DYVAVEGLFEFSD 189

[Close]

BLAST of Carg17918 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 68.6 bits (166), Expect = 6.9e-12
Identity = 58/153 (37.91%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------VQPELGFLLEASDDELGLPP---------AGEKEETE 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP         A E+  TE
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 AV-NFAAEFLGSGGMKGILGLEDETVPNYCWLE 164
            V +       S G+  I G ED  V NY  L+
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLD 153

[Close]

BLAST of Carg17918 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 68.6 bits (166), Expect = 6.9e-12
Identity = 58/153 (37.91%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 31  RLDSANLDVDDAPIASVSSDAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVI 90
           R DSA    +   +   S D   +DS +   ++DDL  +LDD D     E   QDLDSV+
Sbjct: 10  RTDSA----EKKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDP----EPVSQDLDSVM 69

Query: 91  RSFEKEIQVPVPS----------VQPELGFLLEASDDELGLPP---------AGEKEETE 150
           +SFE E+     +           QP+LG+LLEASDDELGLPP         A E+  TE
Sbjct: 70  KSFEDELSTVTTTTAQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTE 129

Query: 151 AV-NFAAEFLGSGGMKGILGLEDETVPNYCWLE 164
            V +       S G+  I G ED  V NY  L+
Sbjct: 130 TVTDLVRASSDSSGIDEIWGFEDH-VSNYGGLD 153

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BLAST of Carg17918 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 50  DAKSIDSFQANLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVPVPSV----- 109
           D   +DS     ++DDL       D+ +D  S  QDLDSV++SFE E+     ++     
Sbjct: 22  DGLDLDSPDVKRLRDDLFD-----DSGLDPVS--QDLDSVMKSFENELSTTTAALSSGET 81

Query: 110 QPELGFLLEASDDELGLPP 124
           QP+LG+L EASDDELGLPP
Sbjct: 82  QPDLGYLFEASDDELGLPP 93

The following BLAST results are available for this feature:

BLAST of Carg17918 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023238.1	1.3e-108	100.00	hypothetical protein SDJN02_14263, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022921385.1	2.0e-106	98.54	uncharacterized protein LOC111429674 [Cucurbita moschata]	[more]
KAG6589552.1	1.7e-105	96.67	hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516749.1	2.5e-104	95.71	uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]	[more]
XP_038890344.1	7.2e-72	74.16	uncharacterized protein LOC120079943 [Benincasa hispida]	[more]

BLAST of Carg17918 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg17918 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5H5	9.8e-107	98.54	uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC1114296...	[more]
A0A5D3DXI3	6.8e-68	70.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UZW3	2.0e-67	70.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BWV1	2.0e-67	70.95	uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=...	[more]
A0A0A0LS21	2.7e-64	69.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1	[more]

BLAST of Carg17918 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.6e-13	34.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	6.9e-12	37.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	6.9e-12	37.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	6.0e-08	44.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 5..205
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 5..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17918-RA	Carg17918-RA	mRNA