Carg17787 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17787
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
Location	Carg_Chr10: 3917851 .. 3922290 (+)
RNA-Seq Expression	Carg17787
Synteny	Carg17787

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCACATTCCCATCTCTTTTCTTCATCTTTCCAGATCTTCTTCTGGGCAAGCACTGCCGCATTTCGAGTTCATTCTAAAGCACAATTCGTTAAACCATTCTTTGCTTGAGTTGCAAGATTAAATCGAGTTTTCAGGAGGGGGTTCTCATAATCCTATGTGGGTTTCTTTTAATAAGTCAGTTGGAGGTCGATTTTGGATTAGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCGACCCTTTTACTGGTCAATCCCGATAACATGGTTTCTTTATCGGGTTCGGTGTTCTTCCCATTAACAGTACCCGATTGTTCCTCTCGATCGCGTAAAGTAACTGTTCTTGATGCGCACAATTCGTTCTGTTTAAAGAAAAAGGATCGGAGAAGGGTTGTTTTTCGTAATTGCATTGCGCCTCCAACGTACTTAAAGAGTAATGGGTCACCTGCCGCCGTAAATTCCATTGTACATCTTTCACTTCTTGATTCATTTCTTTGTGTTCTTCTATTTGCTGCGTCCTGTGCATTTGAGAATTGTTCGTATGTCTGCAAACTCTATGATTTTCCTGTTTGATTGCTTCTGCTGTGCCCCTGATCGTCTTGGTCGTAGTTAATATCTGATTGTTCATAATGTTTCTTCATTTTATTGCCATTTTAGCTATCAATTTAAGCATCCATAATTAGCGACAAGGCGTATATACTTTCTAGCTTTGTTTACTTTCACTGTGCACTTGCGTTCAGTGAGTATCTTCATTTGTGTATTGTGGTTCATATTTAACAAGGATTATATTATCAGGACTCGTTTAGATCAGAACATATAAGCCCAGAAAATGAGGACAAGGATGAGTCTGATGTTCTTATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGAAAAGCATATATTGAGAGGTGTGAACTTCAAGGTGATTCACATTTCTGCTTTTTTAGTTCATTTCCTTTTTCAGTTTTATGCAATTTCTTGGGATTTCTAAGGGCAAGTGTTCTGTGTACACTTCCATTACCATTTACATTTTGTGCTTATGTGAGATCCCACGTCGGTTGGAGAGGAGAACGACACATTCCTTATAAGGGTGTAGAAACCTCTCCCTAGAAGATGTGTTTTAAAAACCTTGAGGTGAAGCCCGAAAGGGAAAGCCTAAAGAAGACAATATCTGTTAGCGGTAGGCATGGGCTGTTACAAATGGTATAAGAGCCAGACACTGAGCGGTGTGCTAGTGAGGGCGTTGGGCCTTCAAGGAGGGTGGATTGTGAGATCTCATATAGGTCGGAGAGGAGAACAAAACATTCCTTCTAGGAGGAGGGAAGTCCTCCGTTTCTTTCAAAGGTGCTGACCCACTCGTAACAAGACAAGTACGTGTGTAGATAGGACGTTAAGGAAGACAACAAGGGCCGGGAGTAAACCGAAAGGCTTATTCTCTTCGTGTCCCGCTTCCATGAGGTTATGGTGGTTATGTTCATCTACGCTGTATTTTGACATTTTTTCGAAAACTTTGATCGGGAGAAATGTCTTCCATTATCACTACAAATGAGAAATTTTCCGTTCAGTCTCCTTACCTCTACGTCAAGATTCTCACAGCTCTTCTATCAGCTAATCTCTTTGTTTTATATTTATTCATCTTTGTTCCTCTCCCATTTTTATGTGTATAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGTACATTAATGACTGTCTTTGAGCATTTTCCAGATTTCCAGGTTTATACAGCTCTCCTCATTCGATTTCTGGTACCGTGAACAGGGAGAGGTATACATTCGAGGTAGAAAGCGAGCTGGTTTGATCGATGATGAGGAGCTATCTGGTATTCGAATTGGATTGGTTAGAATTTTCTCTAACTTAGTATATATTTAAACTATATTTCGAGTTAGGCAGACACGTTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGAGTGTGGAAACCTTCCCCTAGCACACGCGTTTTAAAGCCTTGATGGGAAGCCCGAAAGGGAAAACCCAAAGAGAACAATATCTGCTAGCGGTAGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACCAGACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCAAAAGGGGTGGATTTCGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTACCAGCGAGGACGCTGGGCCCTCGAAGGAGGGTGGATTGTGATGTCCCATGTTGGTTGGGGAGGAGAACAAACCACCATTCATAAGGGTGTGGAAACCTTCCCCTAGTAGACACGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGATGTGGGTCATTACACACGTAAACTTTCATATTTAAATATCTAAACGAAGAACTAAAATATATTTATTGTAGCCCATCAACTTAAGCTTTCAGGTTCCATTGTAAATTTAAAAATTCTAGATTTGTATTCAATTCTTAACATGTTTCGTTCGTTCGTTCGTTCGTTCTTCTCTACCTATAGGTTTTTCAGAGTGCGGCGCTTTTTGACTCGTTAACTGTTCGGCAAAACGTTGGCTTCCTTTTGTAAGGAACTTATTTCTTAGAAAAAACAAGTCTTGCCACAATTTTCATTACATATATGTATTCAGTGCTGAAGGGTTCGTCTCATTTGTGTTCTTGTTTACTGCTTAGATATGAAAATTCAAGCTTGTCTGAAGAACAAATTTCAGCATTGGTAACTGAGAACTTAGCTGCTGTTGGGTTGAAGGTTTGACTGTCATTTGTTTATAAGATGATGCATACTTATAGCTTCCAAGTTCCCTTGGTGTTAAATTTCCTACTAAGATATAACTACGTCTATCTATCGATGGAACGAGCTGACGTTTCTTGCTTACACATCCTCGAATATGTAGTATGTTTCGTTGTAGGAAGTGCTTCGAAACTTTCTGATATTTCATATTTTAACCTTTTGTTTTGTTAGGGAGTTGAGGATCGGTTACCTTCGGAATTATCAGGTGGAATGAAGAAACGAGTTGCTTTAGCTAGGTCTATAATATTTGATAACACGAGGAAAGAAGTTGAGCCAGAGGTATCTCGTTCATCTTCTGGCATTTTAAGTTCCTGGTGACATTAGATTTGATGTATTTTGTAACAGTCTAAGCCCACTGCTAACAAATATTGTCTTCTTTGGGCTTTCCCTTTCGGACTGTCTCTCAAGGTTTTAAAACGCATCTGCTAGGGAGAGGTTTCCACACCAAGAATGTTTTGTTCCGCTCTCCAACCGATGTGGGATCTCACAATGGACTCCGAAGAGGTGGATTGTGAGATCCCACATCAATTGGAGAGAGGAACAAGTGCCAGTGAGGTTTTCACTCTTATAGAATGCGTCTGCTAGGGAGAGATTTCACTCCCTTATAAAGAATGTTTTGTTCCCCACTTCAACCGATGTGGGATCTCAGAGTGGGCCCGAAGAGGGGTGGATTGTGAGATCCCTAATCGATTGGAGAGAGGAACAAGTGCCAGTGAGGTTTTCGCCCCCTTATAAAATGCATCTCCTAGGCAGAGATTTCACTCCCTTATAAAAAATGGTTTGTTCCCCTCTCCAACCGATGTGGGATCTCACAATGGACCCCAAAAGGGGTGGATTGTGAGATTCCACATCGATTGGAGAGAAGAACGAATGCCAGCGAGGATGCTAGACCCCGAAAGAAGGTAGATTATGAGATCCCACATCGATGGGAGAGGGAAACAAAACATTCTTTATAAAGGTATGGAAACCTCTCCCATTCTTTATAAGGGTATGGTAACCTCTCCCTAACATACGTCTAGACGGGAAAGCTCAAAGACGAGGATATCTGCTAGCGATAGGCTTGGGCTGTTACAGATTTAGCTTTATAAAATATATTAACGGGAGATGCAAACTAGGAAGGAAGTATTATTGTTAATCCGACCGGTTTCATAAATCTCGAAGTATTTTCAAATGTGGTTCCTATATTATGTCTATGGTTGGTTTTATATGGTTTCATCTAGTCTGTAATCAAACTTGGATAGTGAAGTAAATGGTATGACTGCCTTGTTGACTGTGATTACAATCAAACGTAATCAGGTGGTGTTGTATGATGAACCAACTGCTGGACTTGACCCAATTGCATCAACCGTTGTTGAAGATCTTATACGTTCTGTTCATATTAAGGGTGAGGATGCTAGTGGGAAGCCTGGGAACATTGCGTCCTATATTGTTGTCACCCACCAACATAGTACCATTAGGAGAGCTGTTGACAGGTTACAGTTTTAG

mRNA sequence

TTTCTTCACATTCCCATCTCTTTTCTTCATCTTTCCAGATCTTCTTCTGGGCAAGCACTGCCGCATTTCGAGTTCATTCTAAAGCACAATTCGTTAAACCATTCTTTGCTTGAGTTGCAAGATTAAATCGAGTTTTCAGGAGGGGGTTCTCATAATCCTATGTGGGTTTCTTTTAATAAGTCAGTTGGAGGTCGATTTTGGATTAGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCGACCCTTTTACTGGTCAATCCCGATAACATGGTTTCTTTATCGGGTTCGGTGTTCTTCCCATTAACAGTACCCGATTGTTCCTCTCGATCGCGTAAAGTAACTGTTCTTGATGCGCACAATTCGTTCTGTTTAAAGAAAAAGGATCGGAGAAGGGTTGTTTTTCGTAATTGCATTGCGCCTCCAACGTACTTAAAGAGTAATGGGTCACCTGCCGCCGTAAATTCCATTGACTCGTTTAGATCAGAACATATAAGCCCAGAAAATGAGGACAAGGATGAGTCTGATGTTCTTATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGAAAAGCATATATTGAGAGGTGTGAACTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATACATTCGAGGTAGAAAGCGAGCTGGTTTGATCGATGATGAGGAGCTATCTGGTATTCGAATTGGATTGGTTTTTCAGAGTGCGGCGCTTTTTGACTCGTTAACTGTTCGGCAAAACGTTGGCTTCCTTTTATATGAAAATTCAAGCTTGTCTGAAGAACAAATTTCAGCATTGGTAACTGAGAACTTAGCTGCTGTTGGGTTGAAGGGAGTTGAGGATCGGTTACCTTCGGAATTATCAGGTGGAATGAAGAAACGAGTTGCTTTAGCTAGGTCTATAATATTTGATAACACGAGGAAAGAAGTTGAGCCAGAGGTGGTGTTGTATGATGAACCAACTGCTGGACTTGACCCAATTGCATCAACCGTTGTTGAAGATCTTATACGTTCTGTTCATATTAAGGGTGAGGATGCTAGTGGGAAGCCTGGGAACATTGCGTCCTATATTGTTGTCACCCACCAACATAGTACCATTAGGAGAGCTGTTGACAGGTTACAGTTTTAG

Coding sequence (CDS)

ATGGTTTCTTTATCGGGTTCGGTGTTCTTCCCATTAACAGTACCCGATTGTTCCTCTCGATCGCGTAAAGTAACTGTTCTTGATGCGCACAATTCGTTCTGTTTAAAGAAAAAGGATCGGAGAAGGGTTGTTTTTCGTAATTGCATTGCGCCTCCAACGTACTTAAAGAGTAATGGGTCACCTGCCGCCGTAAATTCCATTGACTCGTTTAGATCAGAACATATAAGCCCAGAAAATGAGGACAAGGATGAGTCTGATGTTCTTATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGAAAAGCATATATTGAGAGGTGTGAACTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATACATTCGAGGTAGAAAGCGAGCTGGTTTGATCGATGATGAGGAGCTATCTGGTATTCGAATTGGATTGGTTTTTCAGAGTGCGGCGCTTTTTGACTCGTTAACTGTTCGGCAAAACGTTGGCTTCCTTTTATATGAAAATTCAAGCTTGTCTGAAGAACAAATTTCAGCATTGGTAACTGAGAACTTAGCTGCTGTTGGGTTGAAGGGAGTTGAGGATCGGTTACCTTCGGAATTATCAGGTGGAATGAAGAAACGAGTTGCTTTAGCTAGGTCTATAATATTTGATAACACGAGGAAAGAAGTTGAGCCAGAGGTGGTGTTGTATGATGAACCAACTGCTGGACTTGACCCAATTGCATCAACCGTTGTTGAAGATCTTATACGTTCTGTTCATATTAAGGGTGAGGATGCTAGTGGGAAGCCTGGGAACATTGCGTCCTATATTGTTGTCACCCACCAACATAGTACCATTAGGAGAGCTGTTGACAGGTTACAGTTTTAG

Protein sequence

MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGSPAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRAVDRLQF

Homology

[Close]

BLAST of Carg17787 vs. NCBI nr
Match: KAG7023756.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 607.8 bits (1566), Expect = 5.1e-170
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRLQF
Sbjct: 301 STIRRAVDRLQF 312

[Close]

BLAST of Carg17787 vs. NCBI nr
Match: XP_022960770.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 604.7 bits (1558), Expect = 4.3e-169
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 312

[Close]

BLAST of Carg17787 vs. NCBI nr
Match: KAG6590087.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 603.2 bits (1554), Expect = 1.3e-168
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEE+ISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEKISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 312

[Close]

BLAST of Carg17787 vs. NCBI nr
Match: XP_022988270.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 595.1 bits (1533), Expect = 3.4e-166
Identity = 305/312 (97.76%), Postives = 308/312 (98.72%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFP+TVPDCSSRSRKV V+DAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPVTVPDCSSRSRKVYVIDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVN KIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNLKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEV+LYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 312

[Close]

BLAST of Carg17787 vs. NCBI nr
Match: XP_022960771.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 592.0 bits (1525), Expect = 2.9e-165
Identity = 307/312 (98.40%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAA    DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAA----DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 308

[Close]

BLAST of Carg17787 vs. ExPASy Swiss-Prot
Match: Q9AT00 (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD3 PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.8e-108
Identity = 206/274 (75.18%), Postives = 234/274 (85.40%), Query Frame = 0


Query: 41  RRVVFRNCIAPPTYLKSNGSPAAVNSIDSFRSE--HISPENEDKDESDVLIECRNVYKSF 100
           RR V   CIAPP  L ++ +       DS       +  E   +++SDVLIECR+VYKSF
Sbjct: 40  RRKVSCCCIAPPQNLDNDAT-----KFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSF 99

Query: 101 GEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDD 160
           GEKHIL+GV+FKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KRAGLI D
Sbjct: 100 GEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISD 159

Query: 161 EELSGIRIGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVED 220
           EE+SG+RIGLVFQSAALFDSL+VR+NVGFLLYE S +SE QIS LVT+ LAAVGLKGVE+
Sbjct: 160 EEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVEN 219

Query: 221 RLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHI 280
           RLPSELSGGMKKRVALARS+IFD T++ +EPEV+LYDEPTAGLDPIASTVVEDLIRSVH+
Sbjct: 220 RLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHM 279

Query: 281 KGEDASGKPGNIASYIVVTHQHSTIRRAVDRLQF 313
             EDA GKPG IASY+VVTHQHSTI+RAVDRL F
Sbjct: 280 TDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLF 308

[Close]

BLAST of Carg17787 vs. ExPASy Swiss-Prot
Match: P63358 (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=mkl PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.2e-32
Identity = 85/228 (37.28%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 87  VLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 146
           V IE   + KSFG   I   V   I  GE   ++GPSGTGKS  LK + GLL P++G + 
Sbjct: 26  VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSII 85

Query: 147 IRGRKRAGLID--DEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISA 206
           I G     +I+   +EL  IR   G++FQ  ALF S+ +  N  F L E++   E +I  
Sbjct: 86  IDG---TDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRD 145

Query: 207 LVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLD 266
           +V E LA VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLD
Sbjct: 146 IVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLD 205

Query: 267 PIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRAVDRL 311
           P+ +  +  LI  ++ + +         A+ ++VTH  +  R   D +
Sbjct: 206 PVRTAYLSQLIMDINAQID---------ATILIVTHNINIARTVPDNM 234

[Close]

BLAST of Carg17787 vs. ExPASy Swiss-Prot
Match: P9WQL4 (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=mkl PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.2e-32
Identity = 85/228 (37.28%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 87  VLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 146
           V IE   + KSFG   I   V   I  GE   ++GPSGTGKS  LK + GLL P++G + 
Sbjct: 26  VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSII 85

Query: 147 IRGRKRAGLID--DEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISA 206
           I G     +I+   +EL  IR   G++FQ  ALF S+ +  N  F L E++   E +I  
Sbjct: 86  IDG---TDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRD 145

Query: 207 LVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLD 266
           +V E LA VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLD
Sbjct: 146 IVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLD 205

Query: 267 PIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRAVDRL 311
           P+ +  +  LI  ++ + +         A+ ++VTH  +  R   D +
Sbjct: 206 PVRTAYLSQLIMDINAQID---------ATILIVTHNINIARTVPDNM 234

[Close]

BLAST of Carg17787 vs. ExPASy Swiss-Prot
Match: P9WQL5 (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=mkl PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.2e-32
Identity = 85/228 (37.28%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 87  VLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 146
           V IE   + KSFG   I   V   I  GE   ++GPSGTGKS  LK + GLL P++G + 
Sbjct: 26  VSIEVNGLTKSFGSSRIWEDVTLTIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSII 85

Query: 147 IRGRKRAGLID--DEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISA 206
           I G     +I+   +EL  IR   G++FQ  ALF S+ +  N  F L E++   E +I  
Sbjct: 86  IDG---TDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRD 145

Query: 207 LVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLD 266
           +V E LA VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLD
Sbjct: 146 IVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLD 205

Query: 267 PIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRAVDRL 311
           P+ +  +  LI  ++ + +         A+ ++VTH  +  R   D +
Sbjct: 206 PVRTAYLSQLIMDINAQID---------ATILIVTHNINIARTVPDNM 234

[Close]

BLAST of Carg17787 vs. ExPASy Swiss-Prot
Match: P30769 (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium leprae (strain TN) OX=272631 GN=mkl PE=3 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 8.9e-32
Identity = 84/228 (36.84%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 87  VLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 146
           V IE + + KSFG   I   V   I  GE   ++GPSGTGKS  LK + GLL P++G + 
Sbjct: 14  VAIEVKGLTKSFGSSRIWEDVTLDIPAGEVSVLLGPSGTGKSVFLKSLIGLLRPERGSIL 73

Query: 147 IRGRKRAGLID--DEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISA 206
           I G     +I+   +EL  IR   G++FQ  ALF S+ +  N  F L E++   E +I  
Sbjct: 74  IDG---TDIIECSAKELYEIRTLFGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRD 133

Query: 207 LVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLD 266
           +V E L  VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLD
Sbjct: 134 IVMEKLQLVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLD 193

Query: 267 PIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRAVDRL 311
           P+ +  +  LI  ++ + +         A+ ++VTH  +  R   D +
Sbjct: 194 PVRTAYLSQLIMDINAQID---------ATILIVTHNVNIARTVPDNM 222

[Close]

BLAST of Carg17787 vs. ExPASy TrEMBL
Match: A0A6J1HA23 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461473 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.1e-169
Identity = 311/312 (99.68%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 312

[Close]

BLAST of Carg17787 vs. ExPASy TrEMBL
Match: A0A6J1JJ41 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485572 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.7e-166
Identity = 305/312 (97.76%), Postives = 308/312 (98.72%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFP+TVPDCSSRSRKV V+DAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPVTVPDCSSRSRKVYVIDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVN KIRHGEAVGVI
Sbjct: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNLKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEV+LYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 312

[Close]

BLAST of Carg17787 vs. ExPASy TrEMBL
Match: A0A6J1H8J1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461473 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165
Identity = 307/312 (98.40%), Postives = 307/312 (98.40%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAA    DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI
Sbjct: 61  PAA----DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 308

[Close]

BLAST of Carg17787 vs. ExPASy TrEMBL
Match: A0A6J1JGR7 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485572 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162
Identity = 301/312 (96.47%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVSLSGSVFFP+TVPDCSSRSRKV V+DAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS
Sbjct: 1   MVSLSGSVFFPVTVPDCSSRSRKVYVIDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
           PAA    DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVN KIRHGEAVGVI
Sbjct: 61  PAA----DSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNLKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSGIRIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGIRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKEVEPEV+LYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH
Sbjct: 241 DNTRKEVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLIF 308

[Close]

BLAST of Carg17787 vs. ExPASy TrEMBL
Match: A0A1S3B8N5 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487240 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.7e-153
Identity = 284/312 (91.03%), Postives = 297/312 (95.19%), Query Frame = 0


Query: 1   MVSLSGSVFFPLTVPDCSSRSRKVTVLDAHNSFCLKKKDRRRVVFRNCIAPPTYLKSNGS 60
           MVS+SGSVFFPLTVP+CSSRSRKV VLDAHNSFC K KD+RR+V  NCIAPP Y KS+ S
Sbjct: 1   MVSISGSVFFPLTVPNCSSRSRKVAVLDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  PAAVNSIDSFRSEHISPENEDKDESDVLIECRNVYKSFGEKHILRGVNFKIRHGEAVGVI 120
            +AVNS DSFRSEH+S ENEDKDESDVLIECRNV+KSFGEKHILRGV+FKIRHGEAVGVI
Sbjct: 61  -SAVNSNDSFRSEHLSSENEDKDESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVI 120

Query: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLT 180
           GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSG+RIGLVFQSAALFDSLT
Sbjct: 121 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRIGLIDDEELSGLRIGLVFQSAALFDSLT 180

Query: 181 VRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240
           VRQNVGFLLYENSSLSE+QIS LVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF
Sbjct: 181 VRQNVGFLLYENSSLSEDQISELVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIF 240

Query: 241 DNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQH 300
           DNTRKE+EPEV+LYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPG IASYIVVTHQH
Sbjct: 241 DNTRKEIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGKIASYIVVTHQH 300

Query: 301 STIRRAVDRLQF 313
           STIRRAVDRL F
Sbjct: 301 STIRRAVDRLLF 311

[Close]

BLAST of Carg17787 vs. TAIR 10
Match: AT1G65410.1 (non-intrinsic ABC protein 11 )

HSP 1 Score: 392.1 bits (1006), Expect = 4.1e-109
Identity = 206/274 (75.18%), Postives = 234/274 (85.40%), Query Frame = 0


Query: 41  RRVVFRNCIAPPTYLKSNGSPAAVNSIDSFRSE--HISPENEDKDESDVLIECRNVYKSF 100
           RR V   CIAPP  L ++ +       DS       +  E   +++SDVLIECR+VYKSF
Sbjct: 40  RRKVSCCCIAPPQNLDNDAT-----KFDSLTKSGGGMCKERGLENDSDVLIECRDVYKSF 99

Query: 101 GEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDD 160
           GEKHIL+GV+FKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KRAGLI D
Sbjct: 100 GEKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISD 159

Query: 161 EELSGIRIGLVFQSAALFDSLTVRQNVGFLLYENSSLSEEQISALVTENLAAVGLKGVED 220
           EE+SG+RIGLVFQSAALFDSL+VR+NVGFLLYE S +SE QIS LVT+ LAAVGLKGVE+
Sbjct: 160 EEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVEN 219

Query: 221 RLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHI 280
           RLPSELSGGMKKRVALARS+IFD T++ +EPEV+LYDEPTAGLDPIASTVVEDLIRSVH+
Sbjct: 220 RLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHM 279

Query: 281 KGEDASGKPGNIASYIVVTHQHSTIRRAVDRLQF 313
             EDA GKPG IASY+VVTHQHSTI+RAVDRL F
Sbjct: 280 TDEDAVGKPGKIASYLVVTHQHSTIQRAVDRLLF 308

[Close]

BLAST of Carg17787 vs. TAIR 10
Match: AT3G47790.1 (ABC2 homolog 7 )

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18
Identity = 60/208 (28.85%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 82  KDESDVLIECRNVYKSFG------EKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIA 141
           K   D  + C N+ K +       +K  +RG++  +  GE  G++GP+G GK++ + ++ 
Sbjct: 579 KSTRDSAVLCNNLKKVYSGKDGNPQKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMT 638

Query: 142 GLLSPDKGEVYIRGRKRAGLIDDEELSGIRIGLVFQSAALFDSLTVRQNVGFLLYEN-SS 201
           G++ P  G  +++G     ++ D +     IG+  Q   L++ L+ R+++  L Y    +
Sbjct: 639 GIIKPSSGTAFVQG---LDILTDMDRIYTTIGVCPQHDLLWEKLSGREHL--LFYGRLKN 698

Query: 202 LSEEQISALVTENLAAVGL--KGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVV 261
           L    ++  V E+L +V L   G+ D+  S+ SGGMK+R+++A S+I         P+VV
Sbjct: 699 LKGSVLTQAVEESLRSVNLFHGGIGDKQVSKYSGGMKRRLSVAISLI-------GSPKVV 758

Query: 262 LYDEPTAGLDPIASTVVEDLIRSVHIKG 281
             DEP+ GLDP +   + D+++    KG
Sbjct: 759 YMDEPSTGLDPASRKSLWDVVKRAKRKG 774

[Close]

BLAST of Carg17787 vs. TAIR 10
Match: AT1G67940.1 (non-intrinsic ABC protein 3 )

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-18
Identity = 72/207 (34.78%), Postives = 110/207 (53.14%), Query Frame = 0


Query: 103 ILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRAGLIDDEELS 162
           IL+GV   I  G  VGVIGPSG+GKST L+ +  L  P +  V++ G     +  D    
Sbjct: 44  ILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNV--DVIAL 103

Query: 163 GIRIGLVFQSAALFDSLTVRQNVGF-LLYENSSLSEEQISALVTENLAAVGLKGVEDRLP 222
             R+G++FQ   LF   TV  NV +        LS+E++  L+  +LA +     + +  
Sbjct: 104 RRRVGMLFQLPVLFQG-TVADNVRYGPNLRGEKLSDEEVYKLL--SLADLDASFAK-KTG 163

Query: 223 SELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPTAGLDPIASTVVEDLIRSVHIKGE 282
           +ELS G  +RVALAR++         EPEV+L DEPT+ LDPI++  +ED+I    +K +
Sbjct: 164 AELSVGQAQRVALARTL-------ANEPEVLLLDEPTSALDPISTENIEDVI----VKLK 223

Query: 283 DASGKPGNIASYIVVTHQHSTIRRAVD 309
              G      + ++V+H    I++  D
Sbjct: 224 KQRG-----ITTVIVSHSIKQIQKVAD 228

[Close]

BLAST of Carg17787 vs. TAIR 10
Match: AT3G62150.1 (P-glycoprotein 21 )

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-18
Identity = 71/228 (31.14%), Postives = 116/228 (50.88%), Query Frame = 0


Query: 89  IECRNV---YKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEV 148
           IE  NV   Y +  E+ I RG +  I  G  V ++G SG+GKST++ +I     P  GEV
Sbjct: 403 IELNNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEV 462

Query: 149 YIRGRKRAGLIDDEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSE-----E 208
            I G      + + +L  IR  IGLV Q   LF S ++++N+ +   EN+++ E     E
Sbjct: 463 RIDGIN----LKEFQLKWIRSKIGLVSQEPVLFTS-SIKENIAY-GKENATVEEIRKATE 522

Query: 209 QISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVVLYDEPT 268
             +A    +    GL  +     ++LSGG K+R+A+AR+I+ D       P ++L DE T
Sbjct: 523 LANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKD-------PRILLLDEAT 582

Query: 269 AGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRA 307
           + LD  +  +V++ +  + +             + +VV H+ ST+R A
Sbjct: 583 SALDAESERIVQEALDRIMVN-----------RTTVVVAHRLSTVRNA 606

[Close]

BLAST of Carg17787 vs. TAIR 10
Match: AT1G28010.1 (P-glycoprotein 14 )

HSP 1 Score: 89.0 bits (219), Expect = 7.5e-18
Identity = 78/234 (33.33%), Postives = 120/234 (51.28%), Query Frame = 0


Query: 89   IECRNV---YKSFGEKHILRGVNFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEV 148
            IE RNV   Y +  E  I + +N ++  G+++ V+GPSG+GKST++ +I     P  G +
Sbjct: 1006 IEFRNVSFAYPTRPEIAIFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNL 1065

Query: 149  YIRGRKRAGLIDDEELSGIR--IGLVFQSAALFDSLTVRQNVGFLLYENSSLSE------ 208
             I G      I    L  +R  + LV Q  ALF S ++ +N+ +   EN+S +E      
Sbjct: 1066 CIDGHD----IKSVNLRSLRKKLALVQQEPALF-STSIHENIKY-GNENASEAEIIEAAK 1125

Query: 209  -----EQISALVTENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTRKEVEPEVV 268
                 E IS +    +  VG KGV      +LSGG K+RVA+AR+++ D       P V+
Sbjct: 1126 AANAHEFISRMEEGYMTHVGDKGV------QLSGGQKQRVAIARAVLKD-------PSVL 1185

Query: 269  LYDEPTAGLDPIASTVVEDLIRSVHIKGEDASGKPGNIASYIVVTHQHSTIRRA 307
            L DE T+ LD  A   V++ +  + +KG           + I+V H+ STIR+A
Sbjct: 1186 LLDEATSALDTSAEKQVQEALDKL-MKGR----------TTILVAHRLSTIRKA 1209

The following BLAST results are available for this feature:

BLAST of Carg17787 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023756.1	5.1e-170	100.00	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Cucurbita argyrosperma sub...	[more]
XP_022960770.1	4.3e-169	99.68	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 [Cucurbita ...	[more]
KAG6590087.1	1.3e-168	99.36	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, partial [Cucurbita argyros...	[more]
XP_022988270.1	3.4e-166	97.76	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 [Cucurbita ...	[more]
XP_022960771.1	2.9e-165	98.40	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 [Cucurbita ...	[more]

BLAST of Carg17787 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AT00	5.8e-108	75.18	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
P63358	5.2e-32	37.28	Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium bovis...	[more]
P9WQL4	5.2e-32	37.28	Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuber...	[more]
P9WQL5	5.2e-32	37.28	Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuber...	[more]
P30769	8.9e-32	36.84	Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium lepra...	[more]

BLAST of Carg17787 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA23	2.1e-169	99.68	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A6J1JJ41	1.7e-166	97.76	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A6J1H8J1	1.4e-165	98.40	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 OS=Cucurbit...	[more]
A0A6J1JGR7	1.1e-162	96.47	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like isoform X2 OS=Cucurbit...	[more]
A0A1S3B8N5	4.7e-153	91.03	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 OS=Cucumis melo ...	[more]

BLAST of Carg17787 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65410.1	4.1e-109	75.18	non-intrinsic ABC protein 11	[more]
AT3G47790.1	1.5e-18	28.85	ABC2 homolog 7	[more]
AT1G67940.1	3.4e-18	34.78	non-intrinsic ABC protein 3	[more]
AT3G62150.1	3.4e-18	31.14	P-glycoprotein 21	[more]
AT1G28010.1	7.5e-18	33.33	P-glycoprotein 14	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 113..312 e-value: 1.5E-9 score: 47.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 75..312 e-value: 4.4E-57 score: 195.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 87..310
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 104..259 e-value: 9.4E-30 score: 103.9
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 89..312 score: 17.960649
None	No IPR available	PANTHER	PTHR43023:SF3	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC	coord: 2..311
None	No IPR available	PANTHER	PTHR43023	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC	coord: 2..311
IPR017871	ABC transporter-like, conserved site	PROSITE	PS00211	ABC_TRANSPORTER_1	coord: 224..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17787-RA	Carg17787-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding