Carg17169 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg17169
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glucose-induced degradation protein 8 homolog
Location	Carg_Chr01: 12808749 .. 12811093 (+)
RNA-Seq Expression	Carg17169
Synteny	Carg17169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAGAGTTTCATTCTTTTGACATTTCATGACAGGCTATCAACGACGGTGATGTTCAGAACATTGTTTTGTCGTATCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTGCCTCTACTGGGCTTAAACAGCAGACTGATTGTCTTGTTGGCATGGAGAAAAGAAAACGTTGGTGAAATTTCCCTCTCTTGCGCAATATAAGTGTACATCCGATTGCCTGATCCCCTCCCATTAACCATCTGAATGATATGGGTTTAGTCGTTTACCTCTTTATAGGTAGACTCTTCTGGTGTGAGCTGTGATGGCTTATTTTAGAAATCTGTAGTAAGGAATAACAATCTATTTCTTCCAATGTCTTAAGTGACCCCTGAGTTTAGGAACAAATTCACTGCAAGACAATTCAGCCTGGATACTGAATTCTCTCAAACAATCTGAATGATATGCATTTAAAAGTAATAATCTTTGAGCTTAATGTTGATTTAAATGTGTTTGTGTACACTAAATCTGCTTTTATATTTCCTCAAAATTTGATCTAATTTTTTTGAATCTGAAGGCAACTTTTTGTGTTTTCAGGAATTTATGATTTTGCTGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACAGAAGAGGTAGCACATGGTTTACTCGAGAAGAATGAGGGCCTGCATTTTGATCTTTTGAGCCTTCATTTTGTTGAACTTGTTTGTTCTAGAAAATGGTGAGCCTCCCACCATCATTGTTATTTTATACGTTAACCTTAATACTCAGTCCCTGATGGTCAGCGGGGTTGGTCTTATAAGAGCTGATAACTTTTGATACTCATTTTTGTTCGTTTACATGGCAGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCCCCTTTTGGCAAGTTGCATAAATATGTGGAAAAACTTGAAGTGCGTAACCCTGACCTAGAATGTCCACCATATTTTCTGTCATTTTATTGTTCTTTTTTTTTTTCTTTTCTTTCTTTCATTCCTTTGTTCATCAGGCTGAACCAGCTTACATATTTATGTTGAATAGCTCCAAATACTGATTCTTATGTCATTGTAGGATTCCATGGCCCTCCTTGCTTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCATGGATTACCGGCAAAGAGTAGCAGAAAATCTAAATCGAGAAATTCTTGGTTTGTTCCATTTTTCTTTTCATGACTTTATTTTACATTTCCCATAATACTATAAGAGAGTTTCTTCCATGCGTACAGATTTTAAATCTGAACTCTATATTTTGTGTGATCAACTCCTTATTCCTGTTGTCTTGGTTGATACCAGCACATGCTAACTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGCGACTGTAGTTAGACAGTCCTTAAGCCAAGAGCTGGGCAAGGTAATCTGCTCATTCTAAATTATATGTGCTGGCTTGTTGAAGCTTTGAATTATTTCTGAAATTTTGAATTGGTTCCTTTTAGGTTATGATGGTCATCTGAAGTCATGAGTATTACTTGCTGCTTGTTTCAATTACTAGATGTTTTATAAAAGATGATTACTCAATACACATCCATGTTGGTAACTAAACGTTTACATAGTTGTTGATATCTCTGGATTTGCAGGATGGGCCATCACCATTTTCCTTGAGGGATTTTCTGAAAAGCTAATTCAAGGAGTTAACGGTATGGAAGTTTGATCCTCTCTTCATGTGCTTTAGGTGCCATGTAGGCCATAAACAGTCATCTGGGTCCCCTGAGCAAAAGTGCATGCTGTCTCTAATGTATTGTGATTGTACTTGTACATGCTGTCTCTAGTTTTGCTGCGTGCTCTTTTTTACTCTTATCTTCTTTCATTTTTCAAAGCTTACAATTGTGAGATATTGGCTCGCATTGTTGTGTCTCATAGTCACAGTCCGGTTTTGACAAGGAGGAACATGGGAAGAACTCTGCTTTGTTGTGTTTTGCGATGCCATCAAATGCCAGCTTCGTTTATCAGTTTAAGAAAAGCCTTCTGCATCATCAAATGAGTCGATCGAGTTCTCATTTATTGGACTGTCTAATTTGTAAGTAAGAAAGTGCTGGACCTTTTATTGTAGAAAGCTATAATTTTAAGAATTTCATTTTTCTAAGATTATGAATGATCCACTGCTCTGGGGTTTTAAGTACACACTGGCCGGGACTTCAACTAATTTTCTACTGCTAAAAGCTCGTGTTTGATCCCATCTTAGCACATTAGTTTATATGTGGGAGACATGGTCGCCGTTTGTGCCATGCCGCCCCTTCTGTCATGCAACCGGCTGGAAAATG

mRNA sequence

TCTAAGAGTTTCATTCTTTTGACATTTCATGACAGGCTATCAACGACGGTGATGTTCAGAACATTGTTTTGTCGTATCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTGCCTCTACTGGGCTTAAACAGCAGACTGATTGTCTTGTTGGCATGGAGAAAAGAAAACGTTGGAATTTATGATTTTGCTGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACAGAAGAGGTAGCACATGGTTTACTCGAGAAGAATGAGGGCCTGCATTTTGATCTTTTGAGCCTTCATTTTGTTGAACTTGTTTGTTCTAGAAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCCCCTTTTGGCAAGTTGCATAAATATGTGGAAAAACTTGAAGATTCCATGGCCCTCCTTGCTTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCATGGATTACCGGCAAAGAGTAGCAGAAAATCTAAATCGAGAAATTCTTGCACATGCTAACTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGCGACTGTAGTTAGACAGTCCTTAAGCCAAGAGCTGGGCAAGGATGGGCCATCACCATTTTCCTTGAGGGATTTTCTGAAAAGCTAATTCAAGGAGTTAACGGTATGGAAGTTTGATCCTCTCTTCATGTGCTTTAGGTGCCATGTAGGCCATAAACAGTCATCTGGGTCCCCTGAGCAAAAGTGCATGCTGTCTCTAATGTATTGTGATTGTACTTGTACATGCTGTCTCTAGTTTTGCTGCGTGCTCTTTTTTACTCTTATCTTCTTTCATTTTTCAAAGCTTACAATTGTGAGATATTGGCTCGCATTGTTGTGTCTCATAGTCACAGTCCGGTTTTGACAAGGAGGAACATGGGAAGAACTCTGCTTTGTTGTGTTTTGCGATGCCATCAAATGCCAGCTTCGTTTATCAGTTTAAGAAAAGCCTTCTGCATCATCAAATGAGTCGATCGAGTTCTCATTTATTGGACTGTCTAATTTGTAAGTAAGAAAGTGCTGGACCTTTTATTGTAGAAAGCTATAATTTTAAGAATTTCATTTTTCTAAGATTATGAATGATCCACTGCTCTGGGGTTTTAAGTACACACTGGCCGGGACTTCAACTAATTTTCTACTGCTAAAAGCTCGTGTTTGATCCCATCTTAGCACATTAGTTTATATGTGGGAGACATGGTCGCCGTTTGTGCCATGCCGCCCCTTCTGTCATGCAACCGGCTGGAAAATG

Coding sequence (CDS)

TCTAAGAGTTTCATTCTTTTGACATTTCATGACAGGCTATCAACGACGGTGATGTTCAGAACATTGTTTTGTCGTATCTTGTTCATAATTGTTATAAAGAAACTGCAGAGTCGTTCACTGCCTCTACTGGGCTTAAACAGCAGACTGATTGTCTTGTTGGCATGGAGAAAAGAAAACGTTGGAATTTATGATTTTGCTGTAGAAGGGAATGCACTTAAGGCCATTGAGTTAACAGAAGAGGTAGCACATGGTTTACTCGAGAAGAATGAGGGCCTGCATTTTGATCTTTTGAGCCTTCATTTTGTTGAACTTGTTTGTTCTAGAAAATGCACAGAGGCCCTGGAATTTGCTCAGGTCAAGCTTGCCCCTTTTGGCAAGTTGCATAAATATGTGGAAAAACTTGAAGATTCCATGGCCCTCCTTGCTTATGAAGAACCAGAGAAGTCTCCAATGTTTCATCTGCTTAGCATGGATTACCGGCAAAGAGTAGCAGAAAATCTAAATCGAGAAATTCTTGCACATGCTAACTTGCCGAGCTATACAGCAATGGAAAGGCTGATAAAGCAGGCGACTGTAGTTAGACAGTCCTTAAGCCAAGAGCTGGGCAAGGATGGGCCATCACCATTTTCCTTGAGGGATTTTCTGAAAAGCTAA

Protein sequence

SKSFILLTFHDRLSTTVMFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS

Homology

[Close]

BLAST of Carg17169 vs. NCBI nr
Match: KAG7037883.1 (Glucose-induced degradation protein 8-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.4e-113
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   SKSFILLTFHDRLSTTVMFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENV 60
           SKSFILLTFHDRLSTTVMFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENV
Sbjct: 1   SKSFILLTFHDRLSTTVMFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENV 60

Query: 61  GIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVK 120
           GIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVK
Sbjct: 61  GIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVK 120

Query: 121 LAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSY 180
           LAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSY
Sbjct: 121 LAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSY 180

Query: 181 TAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           TAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS
Sbjct: 181 TAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 217

[Close]

BLAST of Carg17169 vs. NCBI nr
Match: XP_022940039.1 (glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita moschata] >XP_023525060.1 glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 4.4e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 18  MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 77
           MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL
Sbjct: 1   MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 60

Query: 78  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 137
           TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS
Sbjct: 61  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 120

Query: 138 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 197
           MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL
Sbjct: 121 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 180

Query: 198 SQELGKDGPSPFSLRDFLKS 218
           SQELGKDGPSPFSLRDFLKS
Sbjct: 181 SQELGKDGPSPFSLRDFLKS 200

[Close]

BLAST of Carg17169 vs. NCBI nr
Match: XP_022981871.1 (glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 18  MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 77
           MFRTLFCRILFIIVIKKLQSRSLPLL LNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL
Sbjct: 1   MFRTLFCRILFIIVIKKLQSRSLPLLSLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 60

Query: 78  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 137
           TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS
Sbjct: 61  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 120

Query: 138 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 197
           MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL
Sbjct: 121 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 180

Query: 198 SQELGKDGPSPFSLRDFLKS 218
           SQELGKDGPSPFSLRDFLKS
Sbjct: 181 SQELGKDGPSPFSLRDFLKS 200

[Close]

BLAST of Carg17169 vs. NCBI nr
Match: XP_023525059.1 (glucose-induced degradation protein 8 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 3.4e-80
Identity = 160/174 (91.95%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 44  GLNSRLIVLLAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVE 103
           GL  +   L+   K    IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVE
Sbjct: 43  GLKQQTDCLVGMEKRK-RIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVE 102

Query: 104 LVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRV 163
           LVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRV
Sbjct: 103 LVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRV 162

Query: 164 AENLNREILAHANLPSYTAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           AENLNREILAHANLPSYTAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS
Sbjct: 163 AENLNREILAHANLPSYTAMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 215

[Close]

BLAST of Carg17169 vs. NCBI nr
Match: XP_022940037.1 (glucose-induced degradation protein 8 homolog isoform X1 [Cucurbita moschata] >XP_022940038.1 glucose-induced degradation protein 8 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 308.1 bits (788), Expect = 5.8e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 62  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 121
           IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 122 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 181
           APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT
Sbjct: 120 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 179

Query: 182 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS
Sbjct: 180 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 215

[Close]

BLAST of Carg17169 vs. ExPASy Swiss-Prot
Match: Q5ZKQ7 (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-14
Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 58  ENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFA 117
           E + I +  ++G   +AI L   +   LL+ N  L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 118 QVKLAPFG-KLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHAN 177
           Q +LA  G +  + + ++E ++ALLA++ PE+SP   LL+M  RQ+V   +N+ +L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 178 LPSYTAMERLIKQATVVRQSLSQE 201
             S   + +L+K     +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]

BLAST of Carg17169 vs. ExPASy Swiss-Prot
Match: E7FGY2 (Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-14
Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 58  ENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFA 117
           E + I +  ++G   +AI L   +   LL+ N  L+F L   H +EL+  R+   ALEFA
Sbjct: 67  ERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFA 126

Query: 118 QVKLAPFG-KLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHAN 177
           Q +LA  G +  + + ++E ++ALLA++ PE+SP   LL+M  RQ+V   +N+ +L + N
Sbjct: 127 QTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 186

Query: 178 LPSYTAMERLIKQATVVRQSLSQE 201
             S   + +L+K     +  L Q+
Sbjct: 187 RESTPKLAKLLKLLLWAQNELDQK 210

[Close]

BLAST of Carg17169 vs. ExPASy Swiss-Prot
Match: Q32L52 (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.8e-14
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 58  ENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFA 117
           E + I +  ++G   +AI L   +   LL+ N  L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 118 QVKLAPFG-KLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHAN 177
           Q +LA  G +  + + ++E ++ALLA++ PE SP   LL+M  RQ+V   +N+ +L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 178 LPSYTAMERLIKQATVVRQSLSQE 201
             S   + +L+K     +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]

BLAST of Carg17169 vs. ExPASy Swiss-Prot
Match: Q9D7M1 (Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.8e-14
Identity = 48/144 (33.33%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 58  ENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFA 117
           E + I +  ++G   +AI L   +   LL+ N  L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFA 125

Query: 118 QVKLAPFG-KLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHAN 177
           Q +LA  G +  + + ++E ++ALLA++ PE+SP   LL M  RQ+V   +N+ +L + N
Sbjct: 126 QTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYEN 185

Query: 178 LPSYTAMERLIKQATVVRQSLSQE 201
             S   + +L+K     +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]

BLAST of Carg17169 vs. ExPASy Swiss-Prot
Match: Q6PC55 (Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.6e-14
Identity = 48/144 (33.33%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 58  ENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFA 117
           E + I +  ++G   +AI L   +   LL+ N  L+F L   H +EL+  R+   ALEFA
Sbjct: 66  ERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFA 125

Query: 118 QVKLAPFG-KLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHAN 177
           Q +LA  G +  + + ++E ++ALLA++ PE+SP   LL+M  RQ+V   +N+ +L + N
Sbjct: 126 QSQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYEN 185

Query: 178 LPSYTAMERLIKQATVVRQSLSQE 201
             S   + +L+K     +  L Q+
Sbjct: 186 RESTPKLAKLLKLLLWAQNELDQK 209

[Close]

BLAST of Carg17169 vs. ExPASy TrEMBL
Match: A0A6J1FIX1 (glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445791 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 18  MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 77
           MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL
Sbjct: 1   MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 60

Query: 78  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 137
           TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS
Sbjct: 61  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 120

Query: 138 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 197
           MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL
Sbjct: 121 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 180

Query: 198 SQELGKDGPSPFSLRDFLKS 218
           SQELGKDGPSPFSLRDFLKS
Sbjct: 181 SQELGKDGPSPFSLRDFLKS 200

[Close]

BLAST of Carg17169 vs. ExPASy TrEMBL
Match: A0A6J1IXR7 (glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480883 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 18  MFRTLFCRILFIIVIKKLQSRSLPLLGLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 77
           MFRTLFCRILFIIVIKKLQSRSLPLL LNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL
Sbjct: 1   MFRTLFCRILFIIVIKKLQSRSLPLLSLNSRLIVLLAWRKENVGIYDFAVEGNALKAIEL 60

Query: 78  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 137
           TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS
Sbjct: 61  TEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKLAPFGKLHKYVEKLEDS 120

Query: 138 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 197
           MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL
Sbjct: 121 MALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYTAMERLIKQATVVRQSL 180

Query: 198 SQELGKDGPSPFSLRDFLKS 218
           SQELGKDGPSPFSLRDFLKS
Sbjct: 181 SQELGKDGPSPFSLRDFLKS 200

[Close]

BLAST of Carg17169 vs. ExPASy TrEMBL
Match: A0A6J1J0V8 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480883 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.8e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 62  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 121
           IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 122 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 181
           APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT
Sbjct: 120 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 179

Query: 182 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS
Sbjct: 180 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 215

[Close]

BLAST of Carg17169 vs. ExPASy TrEMBL
Match: A0A6J1FII7 (glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445791 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.8e-80
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 62  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 121
           IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 122 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 181
           APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT
Sbjct: 120 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 179

Query: 182 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS
Sbjct: 180 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 215

[Close]

BLAST of Carg17169 vs. ExPASy TrEMBL
Match: A0A6J1BQR5 (glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=LOC111004860 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 146/156 (93.59%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 62  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 121
           IYDFA+EGNALKAIELTEE+AHGLLEKNE LHFDLLSLHFVELVCSRKCTEALEFAQVKL
Sbjct: 60  IYDFAIEGNALKAIELTEEIAHGLLEKNEDLHFDLLSLHFVELVCSRKCTEALEFAQVKL 119

Query: 122 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 181
           APFGK+HKYVEKLED MALLAYEEPEKSPMFHLLS+DYRQRVAE+LNR ILAHAN PSYT
Sbjct: 120 APFGKVHKYVEKLEDFMALLAYEEPEKSPMFHLLSVDYRQRVAESLNRAILAHANFPSYT 179

Query: 182 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLKS 218
           AMERLIKQATVVRQSLSQELGKDGP PFSLRDFLKS
Sbjct: 180 AMERLIKQATVVRQSLSQELGKDGPQPFSLRDFLKS 215

[Close]

BLAST of Carg17169 vs. TAIR 10
Match: AT1G06060.1 (LisH and RanBPM domains containing protein )

HSP 1 Score: 211.1 bits (536), Expect = 9.1e-55
Identity = 106/155 (68.39%), Postives = 125/155 (80.65%), Query Frame = 0


Query: 62  IYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTEALEFAQVKL 121
           I  F +E  ALKA ELTE++A  LLEKN+ L FDLL LHFVEL+C+  CTEAL+F + +L
Sbjct: 58  IIHFILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRL 117

Query: 122 APFGKLHKYVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREILAHANLPSYT 181
           APFGK+ KYVEKLED MALLAYE+PEKSPMFHLLS +YRQ+VA+NLNR IL H N PSYT
Sbjct: 118 APFGKVKKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYT 177

Query: 182 AMERLIKQATVVRQSLSQELGKDGPSPFSLRDFLK 217
            MER+I+Q TVVRQ L++E GKD   PFSL+D LK
Sbjct: 178 PMERIIQQVTVVRQYLTEENGKDAFPPFSLKDSLK 212

[Close]

BLAST of Carg17169 vs. TAIR 10
Match: AT1G61150.1 (LisH and RanBPM domains containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 43/149 (28.86%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 53  LAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTE 112
           LA   + + +      GN   AIE   ++   +L+ N  L F L     +EL+   K  E
Sbjct: 76  LATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEE 135

Query: 113 ALEFAQVKLAPFGKLHK-YVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREI 172
           ALEFAQ +LAP G+ ++ ++E+LE ++ALL +++    P+  LL + +R + A  +N  I
Sbjct: 136 ALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAI 195

Query: 173 LAHANLPSYTAMERLIKQATVVRQSLSQE 201
           L   +      +  L+K     +  L ++
Sbjct: 196 LTSQSHEKDPKLPSLLKMLIWAQTQLDEK 224

[Close]

BLAST of Carg17169 vs. TAIR 10
Match: AT1G61150.3 (LisH and RanBPM domains containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 43/149 (28.86%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 53  LAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTE 112
           LA   + + +      GN   AIE   ++   +L+ N  L F L     +EL+   K  E
Sbjct: 26  LATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEE 85

Query: 113 ALEFAQVKLAPFGKLHK-YVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREI 172
           ALEFAQ +LAP G+ ++ ++E+LE ++ALL +++    P+  LL + +R + A  +N  I
Sbjct: 86  ALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAI 145

Query: 173 LAHANLPSYTAMERLIKQATVVRQSLSQE 201
           L   +      +  L+K     +  L ++
Sbjct: 146 LTSQSHEKDPKLPSLLKMLIWAQTQLDEK 174

[Close]

BLAST of Carg17169 vs. TAIR 10
Match: AT1G61150.2 (LisH and RanBPM domains containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 43/149 (28.86%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 53  LAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTE 112
           LA   + + +      GN   AIE   ++   +L+ N  L F L     +EL+   K  E
Sbjct: 59  LATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEE 118

Query: 113 ALEFAQVKLAPFGKLHK-YVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREI 172
           ALEFAQ +LAP G+ ++ ++E+LE ++ALL +++    P+  LL + +R + A  +N  I
Sbjct: 119 ALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAI 178

Query: 173 LAHANLPSYTAMERLIKQATVVRQSLSQE 201
           L   +      +  L+K     +  L ++
Sbjct: 179 LTSQSHEKDPKLPSLLKMLIWAQTQLDEK 207

[Close]

BLAST of Carg17169 vs. TAIR 10
Match: AT1G61150.4 (LisH and RanBPM domains containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 43/149 (28.86%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 53  LAWRKENVGIYDFAVEGNALKAIELTEEVAHGLLEKNEGLHFDLLSLHFVELVCSRKCTE 112
           LA   + + +      GN   AIE   ++   +L+ N  L F L     +EL+   K  E
Sbjct: 59  LATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEE 118

Query: 113 ALEFAQVKLAPFGKLHK-YVEKLEDSMALLAYEEPEKSPMFHLLSMDYRQRVAENLNREI 172
           ALEFAQ +LAP G+ ++ ++E+LE ++ALL +++    P+  LL + +R + A  +N  I
Sbjct: 119 ALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAI 178

Query: 173 LAHANLPSYTAMERLIKQATVVRQSLSQE 201
           L   +      +  L+K     +  L ++
Sbjct: 179 LTSQSHEKDPKLPSLLKMLIWAQTQLDEK 207

The following BLAST results are available for this feature:

BLAST of Carg17169 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037883.1	2.4e-113	100.00	Glucose-induced degradation protein 8-like protein, partial [Cucurbita argyrospe...	[more]
XP_022940039.1	4.4e-104	100.00	glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita moschata] >X...	[more]
XP_022981871.1	2.2e-103	99.50	glucose-induced degradation protein 8 homolog isoform X2 [Cucurbita maxima]	[more]
XP_023525059.1	3.4e-80	91.95	glucose-induced degradation protein 8 homolog isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_022940037.1	5.8e-80	100.00	glucose-induced degradation protein 8 homolog isoform X1 [Cucurbita moschata] >X...	[more]

BLAST of Carg17169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZKQ7	2.6e-14	33.33	Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 P...	[more]
E7FGY2	4.4e-14	33.33	Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b ...	[more]
Q32L52	5.8e-14	33.33	Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2...	[more]
Q9D7M1	5.8e-14	33.33	Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 P...	[more]
Q6PC55	7.6e-14	33.33	Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a ...	[more]

BLAST of Carg17169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIX1	2.2e-104	100.00	glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1IXR7	1.1e-103	99.50	glucose-induced degradation protein 8 homolog isoform X2 OS=Cucurbita maxima OX=...	[more]
A0A6J1J0V8	2.8e-80	100.00	glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1FII7	2.8e-80	100.00	glucose-induced degradation protein 8 homolog isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1BQR5	1.6e-75	93.59	glucose-induced degradation protein 8 homolog OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Carg17169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06060.1	9.1e-55	68.39	LisH and RanBPM domains containing protein	[more]
AT1G61150.1	2.1e-11	28.86	LisH and RanBPM domains containing protein	[more]
AT1G61150.3	2.1e-11	28.86	LisH and RanBPM domains containing protein	[more]
AT1G61150.2	2.1e-11	28.86	LisH and RanBPM domains containing protein	[more]
AT1G61150.4	2.1e-11	28.86	LisH and RanBPM domains containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 108..203 e-value: 1.1E-28 score: 111.3
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 68..197 e-value: 1.2E-27 score: 96.7
None	No IPR available	PANTHER	PTHR12864	RAN BINDING PROTEIN 9-RELATED	coord: 57..216
None	No IPR available	PANTHER	PTHR12864:SF21	VACUOLAR IMPORT AND DEGRADATION PROTEIN 30	coord: 57..216
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 68..112 score: 9.828519

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17169-RA	Carg17169-RA	mRNA