Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCCTCACTTTGATCTCTATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCACCCCCGTCCCTCCCACCACCACCACCACCCCTCCTCCGCCACTCCTCCTCCAGTATCAGCTCCCCCACCTGCCACTCCACCACCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACCCCTCCTCCAGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCACCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATGTAAGCTTCATTATATACTTCGATTCATCATACATTAATCTTCTACTAAATAATTTTTAATGTCATTAAACTAATAATTCTACATTTTCAAATAATTTTTTTTAGATTCATTAAAAAATTTAACTCATTTTTTACATTTTTTTTTTATTTTAAAATTATTATCCACAAAATCAAGAGTTCATAGATCCTAGACTCGGTGTAAATTAAAATTTTACGGTCATATTTAATAGAAATTATATAATACACACAAAATTAAAAGTTTAGAAATATTTTAAACACCCTTTAAAGCTCATAAACTTTTATGACACGAACACGAACAAAAATTTCTAGATCTTCTTGCATTTCATGTTACGTTATTTTTGTTAATCATTATCATCGAACGCTAACACGACATGTCAGATTGACGGACAATATTATTATTATTATTATTATTATTATTATTATTTGCAGAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTCTATGCTGTCTATGTTGGGTTTTCCATTATTCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATAAATACCCATTTGCTTCCGTTCC
mRNA sequence
AAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCCTCACTTTGATCTCTATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCACCCCCGTCCCTCCCACCACCACCACCACCCCTCCTCCGCCACTCCTCCTCCAGTATCAGCTCCCCCACCTGCCACTCCACCACCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACCCCTCCTCCAGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCACCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAGATTTCTTCCTTTTCTATGCTGTCTATGTTGGGTTTTCCATTATTCTTCATTTTGCCTGTTCCTTATTTCATTTCATTTTGATTATTATTATTATTATTATTAGCCCATTTCTTGTTTGGGACTTTTGATCTCCATATATATAAATACCCATTTGCTTCCGTTCC
Coding sequence (CDS)
AAGCCAAGCCACAATTATGGATCCTCAAGCATTGTTTTGCCTCACTTTGATCTCTATTGCCTTCGCCGTTGCCGGAGCTCAGCCCCCCTCCAGTCCCCCCACCGCCACCCCCGTCCCTCCCACCACCACCACCACCCCTCCTCCGCCACTCCTCCTCCAGTATCAGCTCCCCCACCTGCCACTCCACCACCAGCCACTCCCCCTCCGGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACCCCTCCTCCAGCTTCCCCACCTCCAGCCACTCCTCCTCCGGCATCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCCACTCCTCCTCCAGCTTCCCCACCACCGGCAACTCCACCACCTGCAACCCCACCACCAGCCACTCCACCTCCTGCACCACTGGCATCACCACCAGCGGCGGTTCCGGCTCCTGCACCCAGTAAGAAGAAGTTGAAGGCGGCTCCAGGTCCGGCCCCAGTTTCGAGCCCGCCGATGCCGTCGGCGGAGGGTCCAGGACCCGCCGGCCCAGAATCTCCTACCCCATCTCAGAACGACAATAGTGGAGTGGAGAAAAGTTGGAGAAAGGAGACAATGGTGGGGAGCATGTTGATTGGAATGGGATATGTATTGATGATGGCTTAG
Protein sequence
KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Homology
BLAST of Carg16348 vs. NCBI nr
Match:
KAG7011623.1 (hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 349.0 bits (894), Expect = 3.0e-92
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query: 1 KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPA 60
KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPA
Sbjct: 1 KPSHNYGSSSIVLPHFDLYCLRRCRSSAPLQSPHRHPRPSHHHHHPSSATPPPVSAPPPA 60
Query: 61 TPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA 120
TPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA
Sbjct: 61 TPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPA 120
Query: 121 SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPG 180
SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPG
Sbjct: 121 SPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPG 180
Query: 181 PAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 222
PAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 181 PAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 221
BLAST of Carg16348 vs. NCBI nr
Match:
KAG6571935.1 (hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 245.4 bits (625), Expect = 4.7e-61
Identity = 178/193 (92.23%), Postives = 178/193 (92.23%), Query Frame = 0
Query: 29 PLQSPHRHPRPSHHHHHPSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPP 88
P P P P P ATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPP
Sbjct: 24 PSSPPTATPAPPTTTTTPPPATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPP 83
Query: 89 PASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAA 148
PASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAA
Sbjct: 84 PASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAA 143
Query: 149 VPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVG 208
VPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVG
Sbjct: 144 VPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVG 203
Query: 209 SMLIGMGYVLMMA 222
SMLIGMGYVLMMA
Sbjct: 204 SMLIGMGYVLMMA 216
BLAST of Carg16348 vs. NCBI nr
Match:
XP_022952421.1 (classical arabinogalactan protein 9-like [Cucurbita moschata])
HSP 1 Score: 230.3 bits (586), Expect = 1.6e-56
Identity = 168/176 (95.45%), Postives = 168/176 (95.45%), Query Frame = 0
Query: 46 PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPA 105
P ATPPPVSAPPPAT PPATPPPASPPPATPPPASPPPATPPPAS PPPASPPPA
Sbjct: 40 PPPATPPPVSAPPPAT-PPATPPPASPPPATPPPASPPPATPPPAS-----PPPASPPPA 99
Query: 106 TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP 165
TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP
Sbjct: 100 TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP 159
Query: 166 APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 222
APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 160 APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 209
BLAST of Carg16348 vs. NCBI nr
Match:
XP_023553858.1 (classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 219.9 bits (559), Expect = 2.1e-53
Identity = 159/175 (90.86%), Postives = 164/175 (93.71%), Query Frame = 0
Query: 47 SSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPAT 106
++ PPP + PP ++PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPAT
Sbjct: 37 TTTAPPPATPPPVSSPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPAT 96
Query: 107 PPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGPA 166
PPPASPPPATPPPAS PPPATPPPATPPP PLASPPAAVPAPAPSKKKLKAAPGPA
Sbjct: 97 PPPASPPPATPPPAS-----PPPATPPPATPPPTPLASPPAAVPAPAPSKKKLKAAPGPA 156
Query: 167 PVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 222
PVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 157 PVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 206
BLAST of Carg16348 vs. NCBI nr
Match:
XP_022972415.1 (classical arabinogalactan protein 9-like [Cucurbita maxima])
HSP 1 Score: 198.0 bits (502), Expect = 8.7e-47
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0
Query: 85 ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS 144
ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS
Sbjct: 87 ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS 146
Query: 145 PPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE 204
PPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE
Sbjct: 147 PPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE 206
Query: 205 TMVGSMLIGMGYVLMMA 222
T++GSMLIGMGYVLMMA
Sbjct: 207 TVLGSMLIGMGYVLMMA 223
BLAST of Carg16348 vs. ExPASy Swiss-Prot
Match:
Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)
HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 105/184 (57.07%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 46 PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPA 105
P +ATP P P P TPPP ATPPP S PP P SPPP T PPPA+PPP ++PPPA
Sbjct: 26 PPTATPAP---PTPTTPPPAATPPPVSAPP--PVTTSPPPVTTAPPPANPPPPVSSPPPA 85
Query: 106 SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK 165
SPPPATPPP + PP PP ASPPPATPPP ATPPPAPLASPPA VPAPAP+ K
Sbjct: 86 SPPPATPPPVASPP--PPVASPPPATPPPV----ATPPPAPLASPPAQVPAPAPTTK--P 145
Query: 166 AAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGY 221
+P P+P SSPP+PS++ PGP+ SP PS ND +G K MV S++ G
Sbjct: 146 DSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASK------MVSSLVFGSVL 190
BLAST of Carg16348 vs. ExPASy TrEMBL
Match:
A0A6J1GK65 (classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111455113 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 7.6e-57
Identity = 168/176 (95.45%), Postives = 168/176 (95.45%), Query Frame = 0
Query: 46 PSSATPPPVSAPPPATPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPA 105
P ATPPPVSAPPPAT PPATPPPASPPPATPPPASPPPATPPPAS PPPASPPPA
Sbjct: 40 PPPATPPPVSAPPPAT-PPATPPPASPPPATPPPASPPPATPPPAS-----PPPASPPPA 99
Query: 106 TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP 165
TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP
Sbjct: 100 TPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLKAAPGP 159
Query: 166 APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 222
APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA
Sbjct: 160 APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMMA 209
BLAST of Carg16348 vs. ExPASy TrEMBL
Match:
A0A6J1I8J9 (classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111470982 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0
Query: 85 ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS 144
ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS
Sbjct: 87 ATPPPASPPPATPPPASPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLAS 146
Query: 145 PPAAVPAPAPSKKKLKAAPGPAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE 204
PPAAVPAPAPSKKKLKAAPG APVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE
Sbjct: 147 PPAAVPAPAPSKKKLKAAPGSAPVSSPPMPSAEGPGPAGPESPTPSQNDNSGVEKSWRKE 206
Query: 205 TMVGSMLIGMGYVLMMA 222
T++GSMLIGMGYVLMMA
Sbjct: 207 TVLGSMLIGMGYVLMMA 223
BLAST of Carg16348 vs. ExPASy TrEMBL
Match:
A0A5A7SJX5 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001070 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 1.0e-37
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0
Query: 46 PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPAS 105
P +AT PP SAPPPA TPPP + P PP ATPPP A+PPPA+PPPASPPPA+PPPA+
Sbjct: 29 PPTATPSPPTTSAPPPASTPPPVSSP---PPAATPPPAATPPPASPPPASPPPASPPPAT 88
Query: 106 PPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK- 165
PPPA+PPPASPPPA+PPPASPPPA+PPPA+PPPA PPPAPLASPP AVPAPAPSKKK+K
Sbjct: 89 PPPASPPPASPPPASPPPASPPPASPPPASPPPAIPPPAPLASPPTAVPAPAPSKKKVKA 148
Query: 166 AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLM 221
AAPGPAPVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +
Sbjct: 149 AAPGPAPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFL 206
BLAST of Carg16348 vs. ExPASy TrEMBL
Match:
A0A1S3BZW9 (classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 1.0e-37
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0
Query: 46 PSSAT--PPPVSAPPPA-TPPPATPPPASPPPATPPP-ASPPPATPPPASPPPATPPPAS 105
P +AT PP SAPPPA TPPP + P PP ATPPP A+PPPA+PPPASPPPA+PPPA+
Sbjct: 29 PPTATPSPPTTSAPPPASTPPPVSSP---PPAATPPPAATPPPASPPPASPPPASPPPAT 88
Query: 106 PPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK- 165
PPPA+PPPASPPPA+PPPASPPPA+PPPA+PPPA PPPAPLASPP AVPAPAPSKKK+K
Sbjct: 89 PPPASPPPASPPPASPPPASPPPASPPPASPPPAIPPPAPLASPPTAVPAPAPSKKKVKA 148
Query: 166 AAPGPAPVSSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLM 221
AAPGPAPVSSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +
Sbjct: 149 AAPGPAPVSSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFL 206
BLAST of Carg16348 vs. ExPASy TrEMBL
Match:
A0A0A0K6D8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 3.3e-36
Identity = 137/173 (79.19%), Postives = 151/173 (87.28%), Query Frame = 0
Query: 55 SAPPPATPPP---ATPPPAS--PPPATPPPASPPPATPPPASPPPATPPPASPPPATPPP 114
S+PP ATP P +TPPP S PP ATPPPASPPPA+PPPASPPPATPPPASPPPA+PPP
Sbjct: 25 SSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPASPPPASPPPATPPPASPPPASPPP 84
Query: 115 ASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK-AAPGPAPV 174
ASPPPA+PPPA+PPPA+P PPPATPPPAPLASPP AVPAPAPSKKK+K AAP P+PV
Sbjct: 85 ASPPPASPPPATPPPASP----PPPATPPPAPLASPPTAVPAPAPSKKKVKAAAPSPSPV 144
Query: 175 SSPPMPSAEGPGPAGP-ESPTPSQNDNSGVEKSWRKETMVGSMLIGMGYVLMM 221
SSPP PS E PGPAGP +SPTPSQNDNSGVEK WRKE+MVGS++IGMGYV +M
Sbjct: 145 SSPPAPSVEAPGPAGPDQSPTPSQNDNSGVEKVWRKESMVGSIVIGMGYVFLM 193
BLAST of Carg16348 vs. TAIR 10
Match:
AT2G14890.1 (arabinogalactan protein 9 )
HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 105/184 (57.07%), Postives = 120/184 (65.22%), Query Frame = 0
Query: 46 PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPA 105
P +ATP P P P TPPP ATPPP S PP P SPPP T PPPA+PPP ++PPPA
Sbjct: 26 PPTATPAP---PTPTTPPPAATPPPVSAPP--PVTTSPPPVTTAPPPANPPPPVSSPPPA 85
Query: 106 SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK 165
SPPPATPPP + PP PP ASPPPATPPP ATPPPAPLASPPA VPAPAP+ K
Sbjct: 86 SPPPATPPPVASPP--PPVASPPPATPPPV----ATPPPAPLASPPAQVPAPAPTTK--P 145
Query: 166 AAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQ---NDNSGVEKSWRKETMVGSMLIGMGY 221
+P P+P SSPP+PS++ PGP+ SP PS ND +G K MV S++ G
Sbjct: 146 DSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTDVNDQNGASK------MVSSLVFGSVL 190
BLAST of Carg16348 vs. TAIR 10
Match:
AT2G14890.2 (arabinogalactan protein 9 )
HSP 1 Score: 55.1 bits (131), Expect = 8.5e-08
Identity = 96/154 (62.34%), Postives = 108/154 (70.13%), Query Frame = 0
Query: 46 PSSATPPPVSAPPPATPPP-ATPPPASPPPATPPPASPPPAT--PPPASPPP--ATPPPA 105
P +ATP P P P TPPP ATPPP S PP P SPPP T PPPA+PPP ++PPPA
Sbjct: 26 PPTATPAP---PTPTTPPPAATPPPVSAPP--PVTTSPPPVTTAPPPANPPPPVSSPPPA 85
Query: 106 SPPPATPPPASPPPATPPPASPPPATPPPATPPPATPPPAPLASPPAAVPAPAPSKKKLK 165
SPPPATPPP + PP PP ASPPPATPPP ATPPPAPLASPPA VPAPAP+ K
Sbjct: 86 SPPPATPPPVASPP--PPVASPPPATPPPV----ATPPPAPLASPPAQVPAPAPTTK--P 145
Query: 166 AAPGPAPVSSPPMPSAEGPGPAGPE-SPTPSQND 194
+P P+P SSPP+PS++ PGP+ SP PS D
Sbjct: 146 DSPSPSPSSSPPLPSSDAPGPSTDSISPAPSPTD 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7011623.1 | 3.0e-92 | 100.00 | hypothetical protein SDJN02_26529, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6571935.1 | 4.7e-61 | 92.23 | hypothetical protein SDJN03_28663, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022952421.1 | 1.6e-56 | 95.45 | classical arabinogalactan protein 9-like [Cucurbita moschata] | [more] |
XP_023553858.1 | 2.1e-53 | 90.86 | classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022972415.1 | 8.7e-47 | 97.81 | classical arabinogalactan protein 9-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9C5S0 | 3.1e-07 | 57.07 | Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GK65 | 7.6e-57 | 95.45 | classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1I8J9 | 4.2e-47 | 97.81 | classical arabinogalactan protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC11147... | [more] |
A0A5A7SJX5 | 1.0e-37 | 79.01 | Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3BZW9 | 1.0e-37 | 79.01 | classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103495292 PE=4... | [more] |
A0A0A0K6D8 | 3.3e-36 | 79.19 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071560 PE=4 SV=1 | [more] |