Carg16222 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16222
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nuclear transcription factor Y subunit
Location	Carg_Chr06: 2596756 .. 2599585 (-)
RNA-Seq Expression	Carg16222
Synteny	Carg16222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTAACTTTTTGTTCATTCGGTTCATTTTCATTTCCATGATCATATTTAAGCTTGCCAAAAAGCATGAAAATAATTAAGAGTTGCTTATAAATGGTGGATTTACAAATTTTCGAGTGACTCAATATCACAAGCATATCTCTAGGCTACTCAAAAGTCGATTAAGAGGTGGCTAGGGAATGGTTTATTCAAAACGAATAGCATAGGTAGGTTGAGGAAGAAGCTGGATACTTCTAATCTGACATGTAGCAAACATATGCTCTGAGGTACTACTATTCAAAATGCGATAGGCCATGGATAACAAATGTTTGTAAGAGGAAACAAGTTAGGGGAGGAGGGACCTAGATTGTTTGTGCTGATGAGCTCGACTTATAGCTTAGTAACGTGACATTAGGGGACTGGAGAAGTCGAGAGGGAAAGTGTATCAGGATGGTATGCTTTCAGTGTTTTGAGTTTGCTTAGGCTGGGAGGGTAGGGAGCTCTTTGAACATCTCCAAGCTTGTGGCCTCATTGTGGATAATGGATATTAAGCTCTATTCAAGACTAACCACTAATAAGTTTCCAACTTCAATATGGGCTTTACTACTACTGAAATAACATGCATCCCAGGTCACCATATAGACTTGACATTAGAGTGCAATCTTCTTGAGCAATTTATGTCCCAATCATCTACTGTTGAAGTACACCCTGTGCAACACAGAAGCCGCACTGCCGGTTGACCCTCTACCCGATGGCAACTATCCCTTTTCTTTTTATGCTTAACTACGAACCTTTGTTCTACTTAATGGGGTACATATACAACCCTCAGACCTAATGGTTAGGTTCGACAGAAGTTCGTGCCGCTTATCCCGGCTACAATATGCTTTTCTTTTGTGTATTTAGTCTTAAAACTGGATCTCCCATTTTCCTCAACTAATATTTCTACCATCCCTTCTTCAGAATATTATTTTCTAGCTAATACTTCATCAAGGATTTAGCTAAAATCTCAATGTTTATGAAACAAGAGGGAAAGAAAGTAGCATGAAACTCAAGGAAGACTATTACCTTTTTCTCTTTTTGTGCTGGCTGAGTTAAAATGTCGAACATAATGGTGAGCTTGTTATCCGATGAGAAAACTCCTCTTGAAACATCCATGCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGGTAGGATCTAAAATGTTAATTGAATTTCCCCCCTAAAACAGTGCTTTATACATATATATGTTACTAATTATGAAGACGAAAATTGTAGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGTATGTTTCCTTCCATTCTTCAACCACTTCCTTTTTACCTTCTTTTTTCCTTGTATGTATTCAATGTGAATTGTATTATATTCATAGATATTTTCCAACAAAAAAAAAAGTTAGATAGGTGCATAAGCAGAGCTAAGTATGCAAAAAAAATAAAAATGGTGAGTGGAAAACAATACAATATAGCCAAAAACCAGAAATGGTGCGAAGGAGATGACACATTTAGGCCTCCTAGATGAATGCTGCCAAAAAAGTTAATAGGAAACACAACTCAGGGTTTCATGTAATGAAGTATGGTAGAGAAGTAATTTTCTTTGAACAATATATTTGTTGATTGGGTTCTGCTATTCATTGTAAGCTATCTGGAAAAGGTCAGTCTGCCTAATCTATGAGCAAAAACTTAACCATTTGCAATAATTAGGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGGTATGTAAGTATAAGTCTTACAGAGGCGTCTGTCCTAGCTTTTGGACACTTTAATATGATATAGTATCCAGCATCATGTTCATTCTGTTGTCTGAACGAACTGTTATTGTGATTTATATGCCTCTGATTGTATCCTTCAGTCCAAATACTTTTCTTTTTCCTGTGCAGAACTAGTATCCACATTATTCCTGCTGATATAGATTGCATATCTGTCTTACAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

mRNA sequence

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Coding sequence (CDS)

ATGGCACCACAAACTGGGTATTTGAAAGAACATGAAGGGATTGTTCCCAACTCCCTTGGCCAGTTATCATCTTCCCCTACTCGTCTGTGGAGTGCTGCCTTTGGGCTAGGTTCCCACTCAATTTTTGGGGATTTTGGTCAGGTGAAGGAACAACTTGACAGTAATGGGAAGGAATTTGCTGCAACTAAACAAGCTACTCATGGTTTGGAAAAACTGAACACTGCTCCATTTTCCATCTATCCAGGTGACACTAAGAATTCTGTGGATGCACAAAAACATTCACCAGTTTTTTCCCTGCAATCACCTCTGTCAGAATATCACAACCGTTTCGAGCTTGGATTCGGCCAGCCCCTGACATGTGAAAATTATCCTTACATGGAACAGCATTATGGCATCCTCTCAGCTTATGGACCTCAAATACCAGGTCGGGTTATGCTGCCAATGAGATTAACAACAGATGATGAACCAATTTATGTGAATGCAAAGCAATATCATGGAATCATTAGGCGCAGGCAGATCCGTGCCAAGGCAATGATGAAGAATCGACCTGCAAGAACTCGAAAGCCATATATACATGAATCGCGTCATCTCCACGCAATGCGCCGTCCACGGGGATCCGGTGGCCGTTTCCTGAACATGAAGAATCAGCCAAATGAGAAGAGTTCTATGGTACCAAAGAAAGTTGATGATGTCAATCTTTCTGATTTAACTGGTTCTCAATGTTCTGAGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCAAAATGAAGCCAAGGAGGGGAGGGGCTTTAATCTGTTGAGTTCTGAGGTATCGAGCATGTTCTCGAGGGGACTGCAACGTTTTCAAATCAACCATATTGGACCATCAATGCAGTCACTGGCAGAGATCATTGATGGAGGAGGGCATGGCATGGTTCTCCCCAAATGGGTTGCAGCAGCTGATAACTGCTGTGACCTTTGTTTTTGA

Protein sequence

MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDGGGHGMVLPKWVAAADNCCDLCF

Homology

[Close]

BLAST of Carg16222 vs. NCBI nr
Match: KAG7028162.1 (Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 656.4 bits (1692), Expect = 1.3e-184
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC
Sbjct: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

[Close]

BLAST of Carg16222 vs. NCBI nr
Match: XP_023539687.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.3 bits (1671), Expect = 3.5e-182
Identity = 319/322 (99.07%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHNRFELGFGQPL C
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNRFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

[Close]

BLAST of Carg16222 vs. NCBI nr
Match: XP_022956068.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita moschata])

HSP 1 Score: 643.7 bits (1659), Expect = 8.7e-181
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHN FELGF QPLTC
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

[Close]

BLAST of Carg16222 vs. NCBI nr
Match: KAG6596625.1 (Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 624.8 bits (1610), Expect = 4.2e-175
Identity = 312/322 (96.89%), Postives = 312/322 (96.89%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPL  
Sbjct: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPL-- 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
                   HYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 --------HYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 312

[Close]

BLAST of Carg16222 vs. NCBI nr
Match: XP_023005692.1 (nuclear transcription factor Y subunit A-10-like [Cucurbita maxima])

HSP 1 Score: 623.2 bits (1606), Expect = 1.2e-174
Identity = 310/322 (96.27%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS    LSEYHN FELGFGQPL C
Sbjct: 61  ATKQTGHGLEKLNTAPFSIYPGDTKNSVGAQKPSPVFS----LSEYHNHFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQCFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAA+NCCDLCF
Sbjct: 301 GGHGMVLPKWVAAAENCCDLCF 318

[Close]

BLAST of Carg16222 vs. ExPASy Swiss-Prot
Match: Q9M9X4 (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.3e-41
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222 vs. ExPASy Swiss-Prot
Match: Q8LFU0 (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-22
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKV 234
           RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGGRFLN K    E      ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

[Close]

BLAST of Carg16222 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.9e-22
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 114 FGQPLTCENYPYMEQHY---------------GI-LSAYGPQIPGRVMLPMRLTTDDEPI 173
           + +P+    YPY + +Y               G+ L   G Q PG   +P++    +EP+
Sbjct: 44  YSEPMAHGLYPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPG---VPLQCDAVEEPV 103

Query: 174 YVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQP 233
           +VNAKQYHGI+RRRQ RAK   +NR  + +KPY+HESRHLHA+RRPRG GGRFLN K + 
Sbjct: 104 FVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKEN 163

Query: 234 NEKSSMVPKKVDDVNLSDLTGSQCSEVLQSE 249
            +       K ++   SD   S+ S  L+SE
Sbjct: 164 GD------HKEEEEATSDENTSEASSSLRSE 185

[Close]

BLAST of Carg16222 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-20
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 122 NYPYMEQHYGILSAYGPQI----PGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKA 181
           ++PY  QH    +   PQI    P R+ LP  +  ++EPI+VNAKQY  I+RRR+ RAK 
Sbjct: 139 SFPYASQH----TVQHPQIRGLVPSRMPLPHNI-PENEPIFVNAKQYQAILRRRERRAKL 198

Query: 182 MMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVP 226
             +N+  + RKPY+HESRHLHA++R RGSGGRFLN K      SS+ P
Sbjct: 199 EAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSP 241

[Close]

BLAST of Carg16222 vs. ExPASy TrEMBL
Match: A0A6J1GVR8 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111457847 PE=3 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 4.2e-181
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQA HGLEKLNTAPFSIYPGDTKNSVDAQK SPVFSLQSPLSEYHN FELGF QPLTC
Sbjct: 61  ATKQAAHGLEKLNTAPFSIYPGDTKNSVDAQKPSPVFSLQSPLSEYHNPFELGFSQPLTC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGI+SAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGIISAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAK+GRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKDGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAADNCCDLCF
Sbjct: 301 GGHGMVLPKWVAAADNCCDLCF 322

[Close]

BLAST of Carg16222 vs. ExPASy TrEMBL
Match: A0A6J1KTV1 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111498617 PE=3 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 5.9e-175
Identity = 310/322 (96.27%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60
           MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKEQLDSNGKEFA 60

Query: 61  ATKQATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTC 120
           ATKQ  HGLEKLNTAPFSIYPGDTKNSV AQK SPVFS    LSEYHN FELGFGQPL C
Sbjct: 61  ATKQTGHGLEKLNTAPFSIYPGDTKNSVGAQKPSPVFS----LSEYHNHFELGFGQPLIC 120

Query: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180
           ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK
Sbjct: 121 ENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAMMK 180

Query: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240
           NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ
Sbjct: 181 NRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQ 240

Query: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAEIIDG 300
           CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQ FQINHIGPSMQSLAEIIDG
Sbjct: 241 CSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQCFQINHIGPSMQSLAEIIDG 300

Query: 301 GGHGMVLPKWVAAADNCCDLCF 323
           GGHGMVLPKWVAAA+NCCDLCF
Sbjct: 301 GGHGMVLPKWVAAAENCCDLCF 318

[Close]

BLAST of Carg16222 vs. ExPASy TrEMBL
Match: A0A6J1DDB6 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111019330 PE=3 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 2.9e-150
Identity = 278/329 (84.50%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTGYLKEHEGIVPNSLGQLSSSP RLWS AFG GS +IFGDFGQ+K    EQL SNG
Sbjct: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPARLWS-AFGQGSQTIFGDFGQLKASSIEQLGSNG 60

Query: 61  KEFAATKQAT----HGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFEL 120
           KEF   KQA     HGLEK+NTAPFSIYPGD KNSVDAQK SPVFSLQSPLSEYH RFEL
Sbjct: 61  KEFTGAKQAAQVSEHGLEKVNTAPFSIYPGDCKNSVDAQKPSPVFSLQSPLSEYHTRFEL 120

Query: 121 GFGQPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQ 180
           GFGQP+ C NYPYMEQHYGILSAYGPQIPGRVMLPM LTTDD PIYVNAKQYHGIIRRRQ
Sbjct: 121 GFGQPVICANYPYMEQHYGILSAYGPQIPGRVMLPMSLTTDDGPIYVNAKQYHGIIRRRQ 180

Query: 181 IRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVN 240
           IRAKAMM+NR ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  + K S+  KKVD+VN
Sbjct: 181 IRAKAMMENRLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKDGKISLESKKVDNVN 240

Query: 241 LSDLTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQ 300
           LS+ TGSQCS VLQSESGTLNS NEAK GRGFNL SSEV SMFSRGLQRFQI+H+ PSMQ
Sbjct: 241 LSESTGSQCSVVLQSESGTLNSPNEAK-GRGFNLSSSEVPSMFSRGLQRFQISHLRPSMQ 300

Query: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 322
           SLAEIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 SLAEIIDGGGHGMVLPKWVAAADNCCDLC 327

[Close]

BLAST of Carg16222 vs. ExPASy TrEMBL
Match: A0A1S3B7N7 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.6e-149
Identity = 273/326 (83.74%), Postives = 290/326 (88.96%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVK----EQLDSNG 60
           MAPQTG LKEHE I+PNSLGQLS SP RLWS AFG G  SIFGDFGQVK    +QL SNG
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPSPARLWS-AFGQGPQSIFGDFGQVKASSIQQLGSNG 60

Query: 61  KEFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFG 120
           KEF  TKQ  +HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFG
Sbjct: 61  KEFNGTKQVVSHGLDKLNTAPFSIYPGDYKMSMDAQKPSPVFSLQSPLTEYHNRFELGFG 120

Query: 121 QPLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRA 180
           QPL C NYPYMEQHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRA
Sbjct: 121 QPLICTNYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRA 180

Query: 181 KAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSD 240
           KAMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD
Sbjct: 181 KAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSD 240

Query: 241 LTGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLA 300
            TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLA
Sbjct: 241 STGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSIFSRGLQRFQINHLGPSIPSLA 300

Query: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 322
           EIIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 EIIDGGGHGMVLPKWVAAADNCCDLC 324

[Close]

BLAST of Carg16222 vs. ExPASy TrEMBL
Match: A0A0A0LE75 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G782710 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 8.0e-148
Identity = 271/325 (83.38%), Postives = 288/325 (88.62%), Query Frame = 0


Query: 1   MAPQTGYLKEHEGIVPNSLGQLSSSPTRLWSAAFGLGSHSIFGDFGQVKE---QLDSNGK 60
           MAPQTG LKEHE I+PNSLGQLS +P RLWS A G GS SIFGDFGQVK    QL SNGK
Sbjct: 1   MAPQTGCLKEHERIIPNSLGQLSPTPARLWS-ALGQGSQSIFGDFGQVKASSIQLGSNGK 60

Query: 61  EFAATKQ-ATHGLEKLNTAPFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQ 120
           EF  TKQ   HGL+KLNTAPFSIYPGD K S+DAQK SPVFSLQSPL+EYHNRFELGFGQ
Sbjct: 61  EFNGTKQVVAHGLDKLNTAPFSIYPGDYKISMDAQKPSPVFSLQSPLTEYHNRFELGFGQ 120

Query: 121 PLTCENYPYMEQHYGILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAK 180
           PL C NYPYM+QHYGILSAYGPQIPGR+MLPM LT+DD PIYVNAKQYHGIIRRRQIRAK
Sbjct: 121 PLICANYPYMDQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAK 180

Query: 181 AMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDL 240
           AMM+N+ ARTRKPY+HESRHLHAMRRPRGSGGRFLN KN  N KSSM PKK+D+VNLSD 
Sbjct: 181 AMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKSSMEPKKIDEVNLSDS 240

Query: 241 TGSQCSEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINHIGPSMQSLAE 300
           TGSQCS VLQSESGTLNS NEAK GRGF+L SSEVSS+FSRGLQRFQINH+GPS+ SLAE
Sbjct: 241 TGSQCSVVLQSESGTLNSPNEAK-GRGFSLSSSEVSSLFSRGLQRFQINHLGPSIPSLAE 300

Query: 301 IIDGGGHGMVLPKWVAAADNCCDLC 322
           IIDGGGHGMVLPKWVAAADNCCDLC
Sbjct: 301 IIDGGGHGMVLPKWVAAADNCCDLC 323

[Close]

BLAST of Carg16222 vs. TAIR 10
Match: AT3G05690.1 (nuclear factor Y, subunit A2 )

HSP 1 Score: 169.5 bits (428), Expect = 4.5e-42
Identity = 135/324 (41.67%), Postives = 170/324 (52.47%), Query Frame = 0


Query: 22  LSSSPTRLWSAAFG---LGSHSIFGD---FGQVK-EQLDSNGKEF-AATKQATHGLEKLN 81
           L S+P   W  AFG   L   S+ GD   F  VK   +   G+     +  ATH      
Sbjct: 10  LFSAPQTSWWTAFGSQPLAPESLAGDSDSFAGVKVGSVGETGQRVDKQSNSATH------ 69

Query: 82  TAPFSIYPGDTKN-SVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYME-QHYG 141
              FS+  GD K+  +  + H   FS+QSP        ELGF QP     YPY E Q+YG
Sbjct: 70  -LAFSL--GDVKSPRLVPKPHGATFSMQSPC------LELGFSQPPIYTKYPYGEQQYYG 129

Query: 142 ILSAYGPQIPGRVMLPMRLTTDDEPIYVNAKQYHGIIRRRQIRAKAM----MKNRPARTR 201
           ++SAYG Q   RVMLP+ + T+D  IYVN+KQYHGIIRRRQ RAKA      K   +R R
Sbjct: 130 VVSAYGSQ--SRVMLPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCR 189

Query: 202 KPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKK------VDDVNLSDLTGSQC 261
           KPY+H SRHLHA+RRPRGSGGRFLN K+Q  E S    KK      +        + SQ 
Sbjct: 190 KPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQN 249

Query: 262 SEVLQSESGTLNSQNEAKEGRGFNLLSSEVSSMFSRGLQRFQINH-IGPSMQSLAEIIDG 320
           SEV+  E+GT+N  N      G N+  SEV+SM          N+ +   + SL      
Sbjct: 250 SEVVHPENGTMNLSN------GLNVSGSEVTSM----------NYFLSSPVHSLG----- 292

[Close]

BLAST of Carg16222 vs. TAIR 10
Match: AT5G06510.1 (nuclear factor Y, subunit A10 )

HSP 1 Score: 168.7 bits (426), Expect = 7.7e-42
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222 vs. TAIR 10
Match: AT5G06510.2 (nuclear factor Y, subunit A10 )

HSP 1 Score: 168.7 bits (426), Expect = 7.7e-42
Identity = 116/261 (44.44%), Postives = 148/261 (56.70%), Query Frame = 0


Query: 21  QLSSSPTRLWSAAFG---LGSHSIFGDFGQVKEQLDSNGKEFAATKQATHGL--EKLNTA 80
           +L S P   W  AFG   L + S+ G      E  DS     A T +A  G+  ++ +T 
Sbjct: 5   ELLSPPQTPWWNAFGSQPLTTESLSG------EASDSFTGVKAVTTEAEQGVVDKQTSTT 64

Query: 81  PFSIYPGDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSA 140
            F+  PG  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SA
Sbjct: 65  LFTFSPGGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSA 124

Query: 141 YGPQ-IPGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHE 200
           YG Q   GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H 
Sbjct: 125 YGSQRSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHH 184

Query: 201 SRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLN 260
           SRHLHAMRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+N
Sbjct: 185 SRHLHAMRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETIN 235

Query: 261 SQNEAKEGRGFNLLSSEVSSM 275
           S  EA E    NL  S V+SM
Sbjct: 245 SSREANES---NLSDSAVTSM 235

[Close]

BLAST of Carg16222 vs. TAIR 10
Match: AT5G06510.3 (nuclear factor Y, subunit A10 )

HSP 1 Score: 155.2 bits (391), Expect = 8.8e-38
Identity = 96/195 (49.23%), Postives = 119/195 (61.03%), Query Frame = 0


Query: 82  GDTKNSVDAQKHSPVFSLQSPLSEYHNRFELGFGQPLTCENYPYMEQHYGILSAYGPQ-I 141
           G  K+S D  K    F++QS        FE GF QP+    +P++EQ+YG++SAYG Q  
Sbjct: 16  GGEKSSRDVPKPHVAFAMQSAC------FEFGFAQPMMYTKHPHVEQYYGVVSAYGSQRS 75

Query: 142 PGRVMLPMRL-TTDDEPIYVNAKQYHGIIRRRQIRAKAMMKNRPARTRKPYIHESRHLHA 201
            GRVM+P+++ T +D  IYVN+KQYHGIIRRRQ RAKA    + +R RKPY+H SRHLHA
Sbjct: 76  SGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKA---EKLSRCRKPYMHHSRHLHA 135

Query: 202 MRRPRGSGGRFLNMKNQPNEKSSMVPKKVDDVNLSDLTGSQCSEVLQSESGTLNSQNEAK 261
           MRRPRGSGGRFLN K              D    S  + SQ SEV   E+ T+NS  EA 
Sbjct: 136 MRRPRGSGGRFLNTKT------------ADAAKQSKPSNSQSSEVFHPENETINSSREAN 186

Query: 262 EGRGFNLLSSEVSSM 275
           E    NL  S V+SM
Sbjct: 196 ES---NLSDSAVTSM 186

[Close]

BLAST of Carg16222 vs. TAIR 10
Match: AT1G72830.1 (nuclear factor Y, subunit A3 )

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 122 NYPYMEQHYG--ILSAYGPQ-----------IPGRVMLPMRLTTDDEPIYVNAKQYHGII 181
           ++ Y + HYG  + + Y PQ           IPGRV LP  LT  D P++VNAKQYH I+
Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETD-PVFVNAKQYHAIM 193

Query: 182 RRRQIRAKAMMKNRPARTRKPYIHESRHLHAMRRPRGSGGRFLNMKNQPNEKSSMVPKKV 234
           RRRQ RAK   +N+  R RKPY+HESRH+HA++RPRGSGGRFLN K    E      ++ 
Sbjct: 194 RRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQ 253

The following BLAST results are available for this feature:

BLAST of Carg16222 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028162.1	1.3e-184	100.00	Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma sub...	[more]
XP_023539687.1	3.5e-182	99.07	nuclear transcription factor Y subunit A-10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956068.1	8.7e-181	98.14	nuclear transcription factor Y subunit A-10-like [Cucurbita moschata]	[more]
KAG6596625.1	4.2e-175	96.89	Nuclear transcription factor Y subunit A-10, partial [Cucurbita argyrosperma sub...	[more]
XP_023005692.1	1.2e-174	96.27	nuclear transcription factor Y subunit A-10-like [Cucurbita maxima]	[more]

BLAST of Carg16222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X4	6.3e-41	41.67	Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8LFU0	1.1e-40	44.44	Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
Q93ZH2	1.7e-22	48.00	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.9e-22	41.72	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	4.7e-20	50.00	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg16222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVR8	4.2e-181	98.14	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KTV1	5.9e-175	96.27	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114986...	[more]
A0A6J1DDB6	2.9e-150	84.50	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B7N7	5.6e-149	83.74	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103486690 P...	[more]
A0A0A0LE75	8.0e-148	83.38	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_3G78271...	[more]

BLAST of Carg16222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05690.1	4.5e-42	41.67	nuclear factor Y, subunit A2	[more]
AT5G06510.1	7.7e-42	44.44	nuclear factor Y, subunit A10	[more]
AT5G06510.2	7.7e-42	44.44	nuclear factor Y, subunit A10	[more]
AT5G06510.3	8.8e-38	49.23	nuclear factor Y, subunit A10	[more]
AT1G72830.1	1.2e-23	48.00	nuclear factor Y, subunit A3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 187..210 score: 79.86 coord: 156..178 score: 68.84
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 152..213 e-value: 4.6E-32 score: 122.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 155..210 e-value: 1.2E-24 score: 86.7
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 4..320
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 153..213 score: 33.96146
None	No IPR available	GENE3D	6.10.250.2430		coord: 154..214 e-value: 9.4E-29 score: 101.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224
None	No IPR available	PANTHER	PTHR12632:SF39	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-10	coord: 4..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16222-RA	Carg16222-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity