Carg16034 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg16034
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	homeobox-leucine zipper protein ATHB-40-like
Location	Carg_Chr07: 2236257 .. 2237343 (-)
RNA-Seq Expression	Carg16034
Synteny	Carg16034

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTCCTTATCTCCATCCTTTATTAGTTTCTTCTTCGTGGTATTGGAGCTTTTTCAAAAATCATGTTTTTTTTTTTTTTTTTTTTTTCAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGGTAAAAATATATATTTTTTTTCAATTGATTTGAAAGTAGACGAAACGACTCTCCACAATGGTATGATATTGTCCATTTTAGTATAAAGTCTCACGGTTTTGCTTTAGGCTTCTCCAAGATGCCTCGTACCAATGGAGATAGTATTATTTGATTATAAACTCATGAACATTCCCTAAATTAGTAGATGTGGGACTTTCATCATCTAACCCTTCGTATTTTATGTGTTAAATGTTTTCTTTGATTTTAATGTATACCGATTAATGGGTTATTTTTAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

mRNA sequence

CACTTCACATACACCCACACTTCTAAAGCAATCAAGAGAGAGAAGCTACTGAAGAACTCTACCGCCGGTGATAATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

Coding sequence (CDS)

ATGGCCGCCGCCGACGACGACAGTACATTACTGATCTCGAATCTCTACAGCCCTGGAGTTTTTACTCAAATACTCCCCCAACAAGGTGCGGCGGAGGGAAATAAGCCGACGAAGCGGAGGCGGCGGAGGAGCAAAGCGAAGGAGGCGACCGGGGCGGCGGGGTTGAAGAAGAGGAAGCTGAGTACAGAGCAAGTGAAACTTTTAGAGATGAATTTTGGGGATGAACACAAATTGGAATCGGAGAGGAAAGATCGGTTGGCTTCTGAATTGGGACTTGATCCACGACAAGTCGCCGTCTGGTTTCAGAACCGCCGTGCACGGTGGAAGAACAAGAAGCTGGAAGAGGAATATTCCACTCTCAAAAAAGCTCATGATTCCATTCTTCTCCAAAATTCCCACCTTGAATCTGAGATGGCGAAATTGAGCGAGCAATTGAGAGAGGCGAAGAACGAGATCCAACGATTGGTAGAAGGAAGTGAGAAGATTTGGAGCAATAGCCCGACGTCATCGGAGACGATGGATGCCGTGCCACCGCCGGTGCCGTCGTGGGGAGAGCTGTTCTTGGGAGAATATGAAGATGTATTCTATTGCATGCAACAGCAACACGGCAATTACAGTCAAGGAATGGAGTGGCTTAATCTTTATATGTAA

Protein sequence

MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM

Homology

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BLAST of Carg16034 vs. NCBI nr
Match: KAG7026804.1 (Homeobox-leucine zipper protein ATHB-21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422.5 bits (1085), Expect = 2.1e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL
Sbjct: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV
Sbjct: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

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BLAST of Carg16034 vs. NCBI nr
Match: XP_023518445.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 209/216 (96.76%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MAAADDD+TLLISNLYSPGV+TQILPQQGAAEGNKPTKRRRRRSKAKEA GAAGLKKRKL
Sbjct: 1   MAAADDDNTLLISNLYSPGVYTQILPQQGAAEGNKPTKRRRRRSKAKEAAGAAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSI+LQNSHLE EM KLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPP 
Sbjct: 121 KKAHDSIILQNSHLEYEMTKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPA 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

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BLAST of Carg16034 vs. NCBI nr
Match: XP_022963111.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MAAADDD+TLL+SNLYSPGVFTQIL QQGAAEGNKPTKRRRRRSKAKEA GAAGLKKRKL
Sbjct: 1   MAAADDDNTLLMSNLYSPGVFTQILTQQGAAEGNKPTKRRRRRSKAKEAAGAAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWS+SPTSSETMDA+PPPV
Sbjct: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSSSPTSSETMDAMPPPV 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

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BLAST of Carg16034 vs. NCBI nr
Match: XP_023003086.1 (homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima])

HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 202/216 (93.52%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MA A DD+TLLISNLYSPGV+TQIL QQG AEGNKP KRRRRRSKAKEA G AGLKKRKL
Sbjct: 1   MATAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEM KL+EQLREAKNEIQRLVEGSEKIWSNSPTSSETMD VPP  
Sbjct: 121 KKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLA 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

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BLAST of Carg16034 vs. NCBI nr
Match: KAG6594841.1 (Serine/threonine/tyrosine-protein kinase HT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.0 bits (933), Expect = 8.9e-97
Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MAAA DD+TLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEA GAAGLKKRKL
Sbjct: 1   MAAAADDNTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEAAGAAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEMAKLSEQLREAKN+IQRLVEGSEKIWSNSPTSSETMDAVPPPV
Sbjct: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNKIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180

Query: 181 PSWGELFLGEYED 194
           PSWGELFLGEYED
Sbjct: 181 PSWGELFLGEYED 193

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BLAST of Carg16034 vs. ExPASy Swiss-Prot
Match: O23208 (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-45
Identity = 112/219 (51.14%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAG---LKKRKLS 64
           DD +   IS LY P V+TQI+ Q G     K  KRRR+++K   A+   G    +KRKL+
Sbjct: 6   DDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFRKRKLT 65

Query: 65  TEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLK 124
            EQV +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK
Sbjct: 66  DEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLK 125

Query: 125 KAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVP 184
            +HD++++    LESE+ +L EQL +A+ EIQRL E  E   SNSP SS ++       P
Sbjct: 126 NSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETP 185

Query: 185 SWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            +G+  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 186 FFGDYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

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BLAST of Carg16034 vs. ExPASy Swiss-Prot
Match: Q9ZU70 (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.3e-45
Identity = 109/222 (49.10%), Postives = 148/222 (66.67%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKA------KEATGAAGLKKR 64
           DD + LLIS LY P V+T ++PQQG     KPT+RR+R+SK+       E  G    +KR
Sbjct: 7   DDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGWFRKR 66

Query: 65  KLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 124
           KLS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+
Sbjct: 67  KLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYT 126

Query: 125 TLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPP 184
            LK A+++ +++   L+SE+  L EQL EA+ EIQRL +  E   SNSP SS        
Sbjct: 127 KLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANH 186

Query: 185 PVPSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 187 TTPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

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BLAST of Carg16034 vs. ExPASy Swiss-Prot
Match: Q9LVR0 (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-38
Identity = 108/225 (48.00%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 6   DDSTLLISNLYSPGVFTQ-----ILPQQGAAEGNKPTKRRR-RRSKAKEATG-------A 65
           DD  +L S +Y      Q     I+ Q    E +KP KRRR RRSK   AT         
Sbjct: 8   DDQMMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIG 67

Query: 66  AGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 125
             L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKK
Sbjct: 68  GMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKK 127

Query: 126 LEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSET 185
           LEEEY+ LK  HD+++L    LES++ KL+EQL EA++EI++L E  E++ +NS +SS +
Sbjct: 128 LEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLS 187

Query: 186 MDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           ++A   P   +       Y   FY +     NY Q ME W  LY+
Sbjct: 188 VEANNAPT-DFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

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BLAST of Carg16034 vs. ExPASy Swiss-Prot
Match: Q7XI85 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-31
Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 0


Query: 15  LYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAG--------LKKRKLSTEQVK 74
           +++  V   +L   G  +G +P  RRRRR  A+   G  G         KKR+LS EQV+
Sbjct: 13  MFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVE 72

Query: 75  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 134
           +LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+
Sbjct: 73  MLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132

Query: 135 ILLQNSHLESEMAKLSEQLREAKNEIQRL------------------VEGSEKIWSNSPT 194
            +L   HLE+E+ +L E+L  A+ E++RL                  + GS    + SP+
Sbjct: 133 AILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPS 192

Query: 195 SSETMDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQG--MEWLNLY 216
           SS +     PP    G+  LG+ +D+ Y    ++G Y+    +EW +LY
Sbjct: 193 SSFSTGTCQPPSFGGGD-HLGD-DDLVYV--PEYGGYADNSVVEWFSLY 237

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BLAST of Carg16034 vs. ExPASy Swiss-Prot
Match: A2YN17 (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=HOX14 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.4e-30
Identity = 94/232 (40.52%), Postives = 132/232 (56.90%), Query Frame = 0


Query: 15  LYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAG--------LKKRKLSTEQVK 74
           +++  V   +L   G  +G +P  RRRRR  A+   G  G         KKR+LS EQV+
Sbjct: 13  MFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGDPKKRRLSDEQVE 72

Query: 75  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 134
           +LE++F +E KLE+ RK  LASELGLDP+QVAVWFQNRRAR K+K LEEE+S LK AHD+
Sbjct: 73  MLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDA 132

Query: 135 ILLQNSHLESEMAKLSEQLREAKNEIQRL------------------VEGSEKIWSNSPT 194
            +L   HLE+E+ +L E+L  A+ E++RL                  + GS    + SP+
Sbjct: 133 AILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGLGGSGACVAGSPS 192

Query: 195 SSETMDAVPPPV---PSWGELFLGEYEDVFYCMQQQHGNYSQG--MEWLNLY 216
           SS +     PP       G   LG+ +D+ Y    ++G Y+    +EW +LY
Sbjct: 193 SSFSTGTCQPPSFGGGGGGGDHLGD-DDLVYV--PEYGGYADNSVVEWFSLY 241

[Close]

BLAST of Carg16034 vs. ExPASy TrEMBL
Match: A0A6J1HF68 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111463411 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 210/216 (97.22%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MAAADDD+TLL+SNLYSPGVFTQIL QQGAAEGNKPTKRRRRRSKAKEA GAAGLKKRKL
Sbjct: 1   MAAADDDNTLLMSNLYSPGVFTQILTQQGAAEGNKPTKRRRRRSKAKEAAGAAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWS+SPTSSETMDA+PPPV
Sbjct: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSSSPTSSETMDAMPPPV 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

[Close]

BLAST of Carg16034 vs. ExPASy TrEMBL
Match: A0A6J1KN43 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC111496798 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 202/216 (93.52%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MAAADDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKL 60
           MA A DD+TLLISNLYSPGV+TQIL QQG AEGNKP KRRRRRSKAKEA G AGLKKRKL
Sbjct: 1   MATAADDNTLLISNLYSPGVYTQILSQQGVAEGNKPMKRRRRRSKAKEAAGVAGLKKRKL 60

Query: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120
           STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL
Sbjct: 61  STEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTL 120

Query: 121 KKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPV 180
           KKAHDSILLQNSHLESEM KL+EQLREAKNEIQRLVEGSEKIWSNSPTSSETMD VPP  
Sbjct: 121 KKAHDSILLQNSHLESEMVKLNEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDTVPPLA 180

Query: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM
Sbjct: 181 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 216

[Close]

BLAST of Carg16034 vs. ExPASy TrEMBL
Match: A0A0A0KGE8 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.5e-76
Identity = 162/215 (75.35%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFT-QILPQQGAAEGNKPTKRRRRRSKAKEATGAAGLKKRKLSTE 64
           D D++LL+S+LY+P V+T Q+LPQQG  EG+KPTKRRRRRSKAKE  GAAGLKKRKLS+E
Sbjct: 9   DADNSLLVSHLYNPEVYTQQVLPQQGTGEGSKPTKRRRRRSKAKEGGGAAGLKKRKLSSE 68

Query: 65  QVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 124
           QVKLLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA
Sbjct: 69  QVKLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 128

Query: 125 HDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPV 184
           HDS++LQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V
Sbjct: 129 HDSVVLQKSHLESELMKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAV 188

Query: 185 PSWGELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
              GELF  EYEDVFYCMQ    NY+QG+ W LNL
Sbjct: 189 VPLGELFFEEYEDVFYCMQD--NNYNQGLNWALNL 221

[Close]

BLAST of Carg16034 vs. ExPASy TrEMBL
Match: A0A1S3B2Q4 (homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.7e-75
Identity = 161/212 (75.94%), Postives = 181/212 (85.38%), Query Frame = 0


Query: 8   STLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAG-LKKRKLSTEQVK 67
           ++LL S+LY+P V+TQ+LPQQG  EGNKPTKRRRRRSKAKE  G AG LKKRKLS+EQVK
Sbjct: 13  NSLLSSHLYNPEVYTQVLPQQGTGEGNKPTKRRRRRSKAKEGGGGAGSLKKRKLSSEQVK 72

Query: 68  LLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 127
           LLEMNFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS
Sbjct: 73  LLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKAHDS 132

Query: 128 ILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSE--KIWSNSPTSSETMDAV-PPPVPSW 187
           +LLQ SHLESE+ K+ EQL+EAKNEI+++VEGSE     SNSP+SS TM+AV    V   
Sbjct: 133 VLLQKSHLESELVKVKEQLKEAKNEIRKMVEGSEVRNNSSNSPSSSVTMEAVEEAAVVPL 192

Query: 188 GELFLGEYEDVFYCMQQQHGNYSQGMEW-LNL 215
           GELF  EYEDVFYCMQ    NY+QG++W LNL
Sbjct: 193 GELFFEEYEDVFYCMQD--NNYNQGLDWALNL 222

[Close]

BLAST of Carg16034 vs. ExPASy TrEMBL
Match: A0A6J1GFW2 (homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LOC111453582 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.6e-67
Identity = 145/213 (68.08%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKE-ATGAAGLKKRKLSTE 64
           DDD++ LIS+LY+P ++TQ+LPQQG AEGNKPTKRRRRRS+AKE A  AAGLKKRKLS+E
Sbjct: 9   DDDNSTLISHLYNPEIYTQMLPQQGTAEGNKPTKRRRRRSRAKEVAEAAAGLKKRKLSSE 68

Query: 65  QVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKA 124
           QVKLLEMNFG+EHKLE+ERK+RLASELGLDP QVA+WFQNRRARWKN+KLE +YS LKKA
Sbjct: 69  QVKLLEMNFGNEHKLETERKNRLASELGLDPSQVAIWFQNRRARWKNQKLEHQYSMLKKA 128

Query: 125 HDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVPSW 184
           HDS +LQ +HL+SE+ KL EQL EAKNEIQ+LVE SE+    +   S TMD V      W
Sbjct: 129 HDSAVLQKTHLQSEIEKLKEQLAEAKNEIQKLVEVSER----NRRWSVTMDDV-QAAACW 188

Query: 185 GELFLGEYEDVFYCMQQQHGNYSQGMEWLNLYM 217
           GE+ + EYEDVFY MQ+   NY++ +EW   YM
Sbjct: 189 GEILMEEYEDVFYSMQE--NNYNEPVEWYLNYM 214

[Close]

BLAST of Carg16034 vs. TAIR 10
Match: AT4G36740.1 (homeobox protein 40 )

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-46
Identity = 112/219 (51.14%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKAKEATGAAG---LKKRKLS 64
           DD +   IS LY P V+TQI+ Q G     K  KRRR+++K   A+   G    +KRKL+
Sbjct: 6   DDQNMAFISQLY-PDVYTQIV-QPGEV---KQPKRRRKKTKGSVASADGGNGLFRKRKLT 65

Query: 65  TEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLK 124
            EQV +LEM+FGDEHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK
Sbjct: 66  DEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLK 125

Query: 125 KAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPPPVP 184
            +HD++++    LESE+ +L EQL +A+ EIQRL E  E   SNSP SS ++       P
Sbjct: 126 NSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVEANETP 185

Query: 185 SWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
            +G+  +G    +Y+ +FY + +   +Y    EW++LY+
Sbjct: 186 FFGDYKVGDDGDDYDHLFYPVPE--NSYIDEAEWMSLYI 216

[Close]

BLAST of Carg16034 vs. TAIR 10
Match: AT2G18550.1 (homeobox protein 21 )

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-46
Identity = 109/222 (49.10%), Postives = 148/222 (66.67%), Query Frame = 0


Query: 5   DDDSTLLISNLYSPGVFTQILPQQGAAEGNKPTKRRRRRSKA------KEATGAAGLKKR 64
           DD + LLIS LY P V+T ++PQQG     KPT+RR+R+SK+       E  G    +KR
Sbjct: 7   DDHNLLLISQLY-PNVYTPLVPQQGGEA--KPTRRRKRKSKSVVVAEEGENEGNGWFRKR 66

Query: 65  KLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 124
           KLS EQV++LE++F D+HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK++E+EY+
Sbjct: 67  KLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYT 126

Query: 125 TLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSETMDAVPP 184
            LK A+++ +++   L+SE+  L EQL EA+ EIQRL +  E   SNSP SS        
Sbjct: 127 KLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEANH 186

Query: 185 PVPSWGELFLG----EYEDVFYCMQQQHGNYSQGMEWLNLYM 217
             P +G+  +G      E++ Y       +Y  G++W++ +M
Sbjct: 187 TTPFFGDYDIGFDGEADENLLY-----SPDYIDGLDWMSQFM 220

[Close]

BLAST of Carg16034 vs. TAIR 10
Match: AT5G66700.1 (homeobox 53 )

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-39
Identity = 108/225 (48.00%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 6   DDSTLLISNLYSPGVFTQ-----ILPQQGAAEGNKPTKRRR-RRSKAKEATG-------A 65
           DD  +L S +Y      Q     I+ Q    E +KP KRRR RRSK   AT         
Sbjct: 8   DDQMMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIG 67

Query: 66  AGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKK 125
             L+KRKL+ EQV +LE +FG+EHKLES RK+++A ELGLDPRQVAVWFQNRRARWKNKK
Sbjct: 68  GMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKK 127

Query: 126 LEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSNSPTSSET 185
           LEEEY+ LK  HD+++L    LES++ KL+EQL EA++EI++L E  E++ +NS +SS +
Sbjct: 128 LEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLS 187

Query: 186 MDAVPPPVPSWGELFLGEYEDVFYCMQQQHGNYSQGME-WLNLYM 217
           ++A   P   +       Y   FY +     NY Q ME W  LY+
Sbjct: 188 VEANNAPT-DFELAPETNYNIPFYMLD---NNYLQSMEYWDGLYV 228

[Close]

BLAST of Carg16034 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22
Identity = 59/106 (55.66%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 56  KKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KKR+L+TEQV LLE +F  E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 116 EYSTLKKA-------HDSILLQNSHLESEMAKLSEQL---REAKNE 152
           +Y  LK         +DSI++ N  L SE+  L+E+L   +E  NE
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANE 173

[Close]

BLAST of Carg16034 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 58/117 (49.57%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 49  ATGAAGLKKRKLSTEQVKLLEMNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARW 108
           A+  A  KKR+L  EQVK LE NF  ++KLE ERK +LA ELGL PRQVA+WFQNRRARW
Sbjct: 65  ASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARW 124

Query: 109 KNKKLEEEYSTLKKAHDSILLQNSHLESEMAKLSEQLREAKNEIQRLVEGSEKIWSN 166
           K K+LE +Y  LK   D++      L+ +   L  Q++E K ++   VEG + I  N
Sbjct: 125 KTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLN--VEGVKGIEEN 179

The following BLAST results are available for this feature:

BLAST of Carg16034 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026804.1	2.1e-114	100.00	Homeobox-leucine zipper protein ATHB-21 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023518445.1	2.9e-111	96.76	homeobox-leucine zipper protein ATHB-40-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963111.1	2.9e-111	97.22	homeobox-leucine zipper protein ATHB-40-like [Cucurbita moschata]	[more]
XP_023003086.1	2.8e-106	93.52	homeobox-leucine zipper protein ATHB-40-like [Cucurbita maxima]	[more]
KAG6594841.1	8.9e-97	97.93	Serine/threonine/tyrosine-protein kinase HT1, partial [Cucurbita argyrosperma su...	[more]

BLAST of Carg16034 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23208	3.7e-45	51.14	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9ZU70	6.3e-45	49.10	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q9LVR0	2.6e-38	48.00	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q7XI85	4.0e-31	41.05	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YN17	3.4e-30	40.52	Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Carg16034 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HF68	1.4e-111	97.22	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KN43	1.3e-106	93.52	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A0A0KGE8	5.5e-76	75.35	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G501990 PE...	[more]
A0A1S3B2Q4	4.7e-75	75.94	homeobox-leucine zipper protein ATHB-40 OS=Cucumis melo OX=3656 GN=LOC103485348 ...	[more]
A0A6J1GFW2	3.6e-67	68.08	homeobox-leucine zipper protein ATHB-40-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Carg16034 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36740.1	2.6e-46	51.14	homeobox protein 40	[more]
AT2G18550.1	4.5e-46	49.10	homeobox protein 21	[more]
AT5G66700.1	1.8e-39	48.00	homeobox 53	[more]
AT3G01470.1	4.5e-22	55.66	homeobox 1	[more]
AT5G65310.1	1.7e-21	49.57	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..158
None	No IPR available	GENE3D	1.10.10.60		coord: 51..119 e-value: 8.1E-20 score: 72.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..56
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 6..215
None	No IPR available	PANTHER	PTHR24326:SF577	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE	coord: 6..215
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 82..91 score: 46.12 coord: 91..107 score: 58.71
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 54..115 e-value: 3.1E-18 score: 76.6
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 57..110 e-value: 1.3E-16 score: 60.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 51..111 score: 16.568216
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 56..112 e-value: 4.2133E-16 score: 67.6536
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 86..109
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 56..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16034-RA	Carg16034-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding