Carg15741 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACATATTAAACGAAAATTTGATCAATGAAGAACATACTCTCAAGTAAATGCGTTAAGGAACTGAATCGCTGTAGCAGCTGAATTTTCTCTGCTCCTCACTTTCCTGGAAATTTACAGATTTTCTCTTCCTCTCTCTCTGCTACAGAAGTATTTAAAGTTTTCTGCATTTCAATTTCAATCCAAATCTACTGAGCATTTCTTTTGTTTTTCGCTTCTATCCTTCAGGAATTTCTGCGATTTCATAAATGAGCTTTTTGAGGCCGTTTATGTTGTATTCTACGCTGCGATGGATGACGTGCTTGAGTTGGGGTTTTTCAAGATGGCCTGGATTTGATGGCTTGCTCAGATGTCTTGTGGTTTTGATTTTGTGGTCTATGTATTTGGAAATTCATTTCATTCCATCGTCGTCAATGTATCCAACTCTTCGTATCGGAGATCGAATTCTCGTCGAGAAGGTAAATTTGTTGAGTTCCTCTGGTTTTTAGATGAATTTTGGAATTAATCGATCAAATTTTGAATCGATTTAGGTTTCTTCTGTTGTTCTGAGTTGATTTCTTGTGTTCGCCTAGATTTTTTAGGGCATTTTTGTGCATGTTAAATGATGATCGTAGAAAAGTAGATGTGGATTGAGATCAGATCGAACTCTATGTTGGTAATTTACTTAGGATACTTGAACCCTAGAGTTCTCGAGACAAATGAAATGCTCAACGATAACAAGAATGAAAGGAACTGTTCATGTCATTTACCTTAGACTGTAAGGAAAATTTTCATGTGATCTTTTTCAAACTAATACTTAATGTTCTGATTGCATCTTGTTCTTCTACAGGTCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACACAGGTTAGTTTACAGATGACTATCCTATATGTCTTTTACTTCAACAAATTTGCTTTTTAACAGGACTCTGTTGGAATTATGGTGTGCTATAGCAATCTGGACGCAGAGAAGAGAACCTCGTTGTAAAGAGAGTTGTTGCTAAAGCCGGAGACATGGTTGAGGTATGTAAGAGCTTTCTTATCATTACGCTATTGCTACGTGTCACATTCTTACTCTTGCGGTAGTAGGACAGCGATTGTGCGACACTTGTTCAACTCAGTGAACAAGTCAGCTGTGAAAAATTTGGATTTGCGGACAACGTTGCATATAGTTGAGCCTTGAGTCACGTTTGGGAGAAATGTTATAGGAAACGTGAGCGAGGAAATGCGTTGAAAACAATGTGAAAGAAAGTAATGTTATAAGCTAAAAGCGAGTAGGTAACAATAACGGTTTTGATAACATATAACCCGAGTAGGAAGAAGTGACAACTAGTGATATCCCTTACTCATTTTGGGGCATTTTAGCCATGACGAGTGTAGTCATGATTTTGGTGAATGGTCACACACCTCCGTATTGACACAACATGAAATAGTAAAGGCGTATCTAAGATGAAAGCATGTAAAATGAGTTTGGAATGGACATGCGCCATGGACAACACGTTCTGGACAAGCATGACAAGGATATCCGGCATGCGGCCATAGACAATACGCCTTGGACAAGCATGACCGTGACGTGTACACTCATAGGTACCCCTAAACTGTGGCTCTAGTAGTAAGAAACTATGATACTTGGTGTATCCGAGGTTCTAGGTTGTTCAAGCCCATACAGAAAAATGTGTGAAGTCTCCTAGAGATTAGTTAGAGAGAGCTACGAGAATAATGCAAGAAATGGAACTCCTCAAAATGTATATCTACATTTCCTTATTATTAGTCAGAAACTTCTACAGATTCCACATCAATTTGCAGGGGAAGACTCCTAGAGTTTAAGAAACCAATCATTTATGTGGTTTTTATCCAACACCTTCCAGGTTTGTGAGGGATGTCTCTATGTCAATGGAGTTGCTCAGGATGAAAGGTTCTTAGCGGAGCGGCCAACATACACCACAAAGTCAACTGTGAGTTTTGTTTCAAACTCTACCTTCTTTTTCATTTCACTGCATCATCCTGCAATTTTCTATGACAGCACTAAGACTTCTAAAGCGCATCCTTAGGGATTTTATAGCAGAATCGAATTGGTTAAGTTGATTTGATTGTGCATGATGATTGGGTATGATATGGCTTTCATAGACTCAGCATCCTCGCTGGCACATCGCTCGATGTATGGCTCTGATACCATTTGTAACGGTCCAAGCCCACCACTAATAGATATTGTTCCCTATGGGCTTTCCCCTCAAGGTTCTTAAAACGCGTATGTTAGGGAGAGGTTTCGTCACCCTTATAAAAAATGTTTCGTTCTCCTCTTCAACCGATGTGGGATCTCACAATCCACTCCCCTTCGGGGCCCAACGTCCTCGCTGACACTCGTTCCCTTCTCTACCTATGTTGGACTCCCCAATCCACCTCCCTTCGGGGCAGAGCATCCTTGCTGGCACACCACCTCATGTTCACCTCCCTTCGCAGCTCAGCCTCCTCGCTTGGCACATCACCTTATGTCTGACTTTAATACCATTTGTAACGGCCCAAGCCCGCTAGCAAATATGGTCCTTTTTGAGTTTCCCTTTCGGACTTCCCTTCAAGGTTTTTAAAATGCGTCTGTTGGGAAGAAGTTTCTACACCTTTATAAAAAAATGTTTCGTTCTCCTCCCCAATTGACCAACATGGGATCTCACAAATTATCTCCAAATTCATGGGATTGATTTGTTGGAATTACATGCACTCATCTCTGACTAAAACCATATTAGTTTACCACAGAAAGTAACTTAGGAGTTTCTAGTTGTTAATTTTCGCTTGCTTCGAACTTGCAGCAAGTTCCAAAAGGCCACGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGGTCAGTGTTACTAAGTTCATGTTATATATGTATGTTATGTTTGCTGGGTGCTGGGTGCTGGTTCTGATCATTTCTGTTATTGAATTTGGTATAAGTTGCAAATAGAAGTGAAGGAATGGAGTATTCATTTCATTGTTCTTCATTTGAACAGGGGACCTCTTCCCATCAAGAACATTATTGGGAGATACCTCTGGTCTTGCCACAACCCAACTACCAAATGACTTCATTTAACACCATCAAGTTTGTAAGTTCCACATCCTCATATAACATTGTTTTATTTTTCTTTCATAGATATGATTCTATGAATGCCAAAGAAACAATTTTTTTAATTTTTTTTATTCTGATGTGTGGTTGGTTAACTCGTGTGTTTATAATATTTTTGAAACATGGTACTAATAGTTGCGTCATATCTTGTTTATGATCGTC AAAACATATTAAACGAAAATTTGATCAATGAAGAACATACTCTCAAGTAAATGCGTTAAGGAACTGAATCGCTGTAGCAGCTGAATTTTCTCTGCTCCTCACTTTCCTGGAAATTTACAGATTTTCTCTTCCTCTCTCTCTGCTACAGAAGTATTTAAAGTTTTCTGCATTTCAATTTCAATCCAAATCTACTGAGCATTTCTTTTGTTTTTCGCTTCTATCCTTCAGGAATTTCTGCGATTTCATAAATGAGCTTTTTGAGGCCGTTTATGTTGTATTCTACGCTGCGATGGATGACGTGCTTGAGTTGGGGTTTTTCAAGATGGCCTGGATTTGATGGCTTGCTCAGATGTCTTGTGGTTTTGATTTTGTGGTCTATGTATTTGGAAATTCATTTCATTCCATCGTCGTCAATGTATCCAACTCTTCGTATCGGAGATCGAATTCTCGTCGAGAAGGTCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCAGAGAAGAGAACCTCGTTGTAAAGAGAGTTGTTGCTAAAGCCGGAGACATGGTTGAGGTTTGTGAGGGATGTCTCTATGTCAATGGAGTTGCTCAGGATGAAAGGTTCTTAGCGGAGCGGCCAACATACACCACAAAGTCAACTCAAGTTCCAAAAGGCCACGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGGGGACCTCTTCCCATCAAGAACATTATTGGGAGATACCTCTGGTCTTGCCACAACCCAACTACCAAATGACTTCATTTAACACCATCAAGTTTGTAAGTTCCACATCCTCATATAACATTGTTTTATTTTTCTTTCATAGATATGATTCTATGAATGCCAAAGAAACAATTTTTTTAATTTTTTTTATTCTGATGTGTGGTTGGTTAACTCGTGTGTTTATAATATTTTTGAAACATGGTACTAATAGTTGCGTCATATCTTGTTTATGATCGTC ATGAGCTTTTTGAGGCCGTTTATGTTGTATTCTACGCTGCGATGGATGACGTGCTTGAGTTGGGGTTTTTCAAGATGGCCTGGATTTGATGGCTTGCTCAGATGTCTTGTGGTTTTGATTTTGTGGTCTATGTATTTGGAAATTCATTTCATTCCATCGTCGTCAATGTATCCAACTCTTCGTATCGGAGATCGAATTCTCGTCGAGAAGGTCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCAGAGAAGAGAACCTCGTTGTAAAGAGAGTTGTTGCTAAAGCCGGAGACATGGTTGAGGTTTGTGAGGGATGTCTCTATGTCAATGGAGTTGCTCAGGATGAAAGGTTCTTAGCGGAGCGGCCAACATACACCACAAAGTCAACTCAAGTTCCAAAAGGCCACGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGGGGACCTCTTCCCATCAAGAACATTATTGGGAGATACCTCTGGTCTTGCCACAACCCAACTACCAAATGA MSFLRPFMLYSTLRWMTCLSWGFSRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRIGDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYVNGVAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIWGPLPIKNIIGRYLWSCHNPTTK Homology
BLAST of Carg15741 vs. NCBI nr
Match: KAG6602120.1 (Chloroplast processing peptidase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032818.1 Chloroplast processing peptidase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 398.7 bits (1023), Expect = 2.9e-107 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of Carg15741 vs. NCBI nr
Match: XP_022954017.1 (chloroplast processing peptidase-like [Cucurbita moschata] >XP_023542838.1 chloroplast processing peptidase-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-106 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of Carg15741 vs. NCBI nr
Match: XP_022991150.1 (chloroplast processing peptidase-like [Cucurbita maxima]) HSP 1 Score: 394.0 bits (1011), Expect = 7.0e-106 Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of Carg15741 vs. NCBI nr
Match: XP_022141359.1 (chloroplast processing peptidase-like isoform X1 [Momordica charantia]) HSP 1 Score: 357.5 bits (916), Expect = 7.3e-95 Identity = 163/186 (87.63%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of Carg15741 vs. NCBI nr
Match: XP_038885468.1 (chloroplast processing peptidase-like [Benincasa hispida]) HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93 Identity = 165/187 (88.24%), Postives = 175/187 (93.58%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy Swiss-Prot
Match: Q8H0W1 (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38 Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy Swiss-Prot
Match: O04348 (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2) HSP 1 Score: 147.1 bits (370), Expect = 2.0e-34 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy Swiss-Prot
Match: Q9M9Z2 (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34 Identity = 74/152 (48.68%), Postives = 98/152 (64.47%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy Swiss-Prot
Match: P72660 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 7.2e-29 Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy Swiss-Prot
Match: P73157 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.1e-28 Identity = 57/131 (43.51%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy TrEMBL
Match: A0A6J1GPV1 (chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456402 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 5.2e-107 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy TrEMBL
Match: A0A6J1JS29 (chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC111487833 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106 Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy TrEMBL
Match: A0A6J1CIF2 (chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011778 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95 Identity = 163/186 (87.63%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy TrEMBL
Match: A0A1S3CRY6 (chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87 Identity = 155/188 (82.45%), Postives = 170/188 (90.43%), Query Frame = 0
BLAST of Carg15741 vs. ExPASy TrEMBL
Match: A0A0A0KIU5 (Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382350 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86 Identity = 154/188 (81.91%), Postives = 167/188 (88.83%), Query Frame = 0
BLAST of Carg15741 vs. TAIR 10
Match: AT3G24590.1 (plastidic type i signal peptidase 1 ) HSP 1 Score: 161.4 bits (407), Expect = 7.1e-40 Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of Carg15741 vs. TAIR 10
Match: AT2G30440.1 (thylakoid processing peptide ) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Carg15741 vs. TAIR 10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 146.0 bits (367), Expect = 3.1e-35 Identity = 74/152 (48.68%), Postives = 98/152 (64.47%), Query Frame = 0
BLAST of Carg15741 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11 Identity = 45/127 (35.43%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of Carg15741 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09 Identity = 41/127 (32.28%), Postives = 59/127 (46.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|