Carg15455 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg15455
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSAUR-like auxin-responsive protein family
LocationCarg_Chr06: 10140568 .. 10140975 (-)
RNA-Seq ExpressionCarg15455
SyntenyCarg15455
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCATTCATCTTCACCAGCCCTTGGAAATGCTGCAAATCGATCGACAACGGATCGATAACCTCCTTGGTCGAAGACGAAGAAGCTATCGTCGACAAACACCGCCCACGAAAGCTGAGGGTGGCACCGGAGGGTTATTTCTCAGTCTACGTCGGAGTTGAAATGCAAAGGTTTGTGATCAAAGTTGAGCGAGCAAGCCATCCGCTGTTCAAGATGCTGCTCGACGAAGCGAAGCTCGAATATGGATATAACAGCCAAGCTCCTCTTTGGCTTCCATGCAAAGTTGGTAGGTTTTACAGAGTGTTGAGGAAGATGGATGATGGCTTTGATGTTCTCCATGGCCATGGAAGTCAAAAGCTTTACGGCTCTCATCATCTTTTTATCCCATCTCGTTGGATGGAATAA

mRNA sequence

ATGAAAGCATTCATCTTCACCAGCCCTTGGAAATGCTGCAAATCGATCGACAACGGATCGATAACCTCCTTGGTCGAAGACGAAGAAGCTATCGTCGACAAACACCGCCCACGAAAGCTGAGGGTGGCACCGGAGGGTTATTTCTCAGTCTACGTCGGAGTTGAAATGCAAAGGTTTGTGATCAAAGTTGAGCGAGCAAGCCATCCGCTGTTCAAGATGCTGCTCGACGAAGCGAAGCTCGAATATGGATATAACAGCCAAGCTCCTCTTTGGCTTCCATGCAAAGTTGGTAGGTTTTACAGAGTGTTGAGGAAGATGGATGATGGCTTTGATGTTCTCCATGGCCATGGAAGTCAAAAGCTTTACGGCTCTCATCATCTTTTTATCCCATCTCGTTGGATGGAATAA

Coding sequence (CDS)

ATGAAAGCATTCATCTTCACCAGCCCTTGGAAATGCTGCAAATCGATCGACAACGGATCGATAACCTCCTTGGTCGAAGACGAAGAAGCTATCGTCGACAAACACCGCCCACGAAAGCTGAGGGTGGCACCGGAGGGTTATTTCTCAGTCTACGTCGGAGTTGAAATGCAAAGGTTTGTGATCAAAGTTGAGCGAGCAAGCCATCCGCTGTTCAAGATGCTGCTCGACGAAGCGAAGCTCGAATATGGATATAACAGCCAAGCTCCTCTTTGGCTTCCATGCAAAGTTGGTAGGTTTTACAGAGTGTTGAGGAAGATGGATGATGGCTTTGATGTTCTCCATGGCCATGGAAGTCAAAAGCTTTACGGCTCTCATCATCTTTTTATCCCATCTCGTTGGATGGAATAA

Protein sequence

MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQKLYGSHHLFIPSRWME
Homology
BLAST of Carg15455 vs. NCBI nr
Match: KAG7029107.1 (Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.4 bits (742), Expect = 7.9e-75
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0

Query: 1   MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60
           MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV
Sbjct: 1   MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60

Query: 61  IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120
           IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK
Sbjct: 61  IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120

Query: 121 LYGSHHLFIPSRWME 136
           LYGSHHLFIPSRWME
Sbjct: 121 LYGSHHLFIPSRWME 135

BLAST of Carg15455 vs. NCBI nr
Match: KAG6597664.1 (Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0

Query: 1   MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60
           MKAFIFT+PWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV
Sbjct: 1   MKAFIFTTPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60

Query: 61  IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120
           IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK
Sbjct: 61  IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120

Query: 121 LYGSHHLFIPSRWME 136
           LYGS HLFIPSRWME
Sbjct: 121 LYGSRHLFIPSRWME 135

BLAST of Carg15455 vs. NCBI nr
Match: XP_023539362.1 (auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 3.4e-70
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0

Query: 1   MKAFIFTSPWKCCKSIDNGSITSLVEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60
           MKAFIFT+PWKCCKSIDN SITSLV DEEAI+DKHRPRKLRVAPEGYFSVYVGVEMQRFV
Sbjct: 1   MKAFIFTTPWKCCKSIDNRSITSLVGDEEAIIDKHRPRKLRVAPEGYFSVYVGVEMQRFV 60

Query: 61  IKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120
           IKVERASHPLFKMLL+EA+ EYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK
Sbjct: 61  IKVERASHPLFKMLLEEARSEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDVLHGHGSQK 120

Query: 121 LYGSHHLFIPSRWME 136
           LYGS HLFIPSRWME
Sbjct: 121 LYGSRHLFIPSRWME 135

BLAST of Carg15455 vs. NCBI nr
Match: TQE05047.1 (hypothetical protein C1H46_009339 [Malus baccata])

HSP 1 Score: 127.9 bits (320), Expect = 6.7e-26
Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 0

Query: 5   IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSV 64
           + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+V
Sbjct: 3   LITKTWKRCKSIGRGRPTNIHGMVPALTTKSKSCPNINLGIPKEKRASKRQVAPEGCFTV 62

Query: 65  YVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGF 124
           YVG + QRFVIK E A+HPLFKMLL+EA+ E+GY+S+ PL LPC V  FY+VL +MDD  
Sbjct: 63  YVGSQKQRFVIKTEHANHPLFKMLLEEAESEFGYDSRGPLVLPCDVEIFYKVLMEMDDCG 122

Query: 125 D--VLHGHGSQKLYGSHHLFIPSR 133
           D  V  G G  K YGS+HL  PSR
Sbjct: 123 DQKVPQGCGLAKRYGSYHLLTPSR 146

BLAST of Carg15455 vs. NCBI nr
Match: XP_017179030.1 (auxin-responsive protein SAUR32-like [Malus domestica] >RXH71631.1 hypothetical protein DVH24_025132 [Malus domestica])

HSP 1 Score: 127.5 bits (319), Expect = 8.8e-26
Identity = 70/144 (48.61%), Postives = 87/144 (60.42%), Query Frame = 0

Query: 5   IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSV 64
           + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+V
Sbjct: 3   LITKTWKRCKSIGRGRPTNIHGMVPALTTKSKSCPNINLGIPEEKRATKRQVAPEGCFTV 62

Query: 65  YVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGF 124
           YVG + QRFV+K E A+HPLFKMLL+EA+ E+GY+S+ PL LPC V  FY+VL +MDD  
Sbjct: 63  YVGSQKQRFVVKTEHANHPLFKMLLEEAESEFGYDSRGPLVLPCDVEIFYKVLMEMDDCG 122

Query: 125 D--VLHGHGSQKLYGSHHLFIPSR 133
           D  V  G G  K YGS+HL  PSR
Sbjct: 123 DQKVPQGCGLAKRYGSYHLLTPSR 146

BLAST of Carg15455 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 44  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVL 103
           PEG+  VYVG EM+RFV+  E  +HP+F  LL ++  EYGY  Q  L +PC V  F R+L
Sbjct: 39  PEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERIL 98

Query: 104 RKM 107
             +
Sbjct: 99  ESL 101

BLAST of Carg15455 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 31/81 (38.27%), Postives = 46/81 (56.79%), Query Frame = 0

Query: 32  VDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLW 91
           V +   ++    PEG+  VYVG EM+RFV+  E  +HP+F  LL+ +  EYGY  +  L 
Sbjct: 39  VTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQ 98

Query: 92  LPCKVGRFYRVLRKMDDGFDV 113
           +PC V  F R++  +  G  V
Sbjct: 99  IPCHVLVFERIMESLRLGLPV 119

BLAST of Carg15455 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0

Query: 38  RKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVG 97
           R++   P G+  VYVG EM+RFV+  E  +HP+F  LL+ +  EYGY  +  L +PC V 
Sbjct: 49  RRVNTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVI 108

Query: 98  RFYRVLRKM 107
            F RV+  +
Sbjct: 109 VFERVVETL 117

BLAST of Carg15455 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0

Query: 39  KLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGY-NSQAPLWLPCKVG 98
           K+  AP+GY +VYVG  M+RFVI V   + PLF+ LL +A+ E+GY +    L +PC   
Sbjct: 21  KVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSED 80

Query: 99  RFYRV 103
            F  +
Sbjct: 81  LFQHI 85

BLAST of Carg15455 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 44  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVL 103
           P G+  V VG + +RFV+  E  +HP+F  LL+ +  EYGY  +  L +PC V  F +V+
Sbjct: 49  PSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVV 108

Query: 104 RKMDDG 110
             +  G
Sbjct: 109 ESLRSG 114

BLAST of Carg15455 vs. ExPASy TrEMBL
Match: A0A540N1V8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009339 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.3e-26
Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 0

Query: 5   IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSV 64
           + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+V
Sbjct: 3   LITKTWKRCKSIGRGRPTNIHGMVPALTTKSKSCPNINLGIPKEKRASKRQVAPEGCFTV 62

Query: 65  YVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGF 124
           YVG + QRFVIK E A+HPLFKMLL+EA+ E+GY+S+ PL LPC V  FY+VL +MDD  
Sbjct: 63  YVGSQKQRFVIKTEHANHPLFKMLLEEAESEFGYDSRGPLVLPCDVEIFYKVLMEMDDCG 122

Query: 125 D--VLHGHGSQKLYGSHHLFIPSR 133
           D  V  G G  K YGS+HL  PSR
Sbjct: 123 DQKVPQGCGLAKRYGSYHLLTPSR 146

BLAST of Carg15455 vs. ExPASy TrEMBL
Match: A0A498HR56 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_025132 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26
Identity = 70/144 (48.61%), Postives = 87/144 (60.42%), Query Frame = 0

Query: 5   IFTSPWKCCKSIDNGSITSLVEDEEAIVDK--------------HRPRKLRVAPEGYFSV 64
           + T  WK CKSI  G  T++     A+  K               R  K +VAPEG F+V
Sbjct: 3   LITKTWKRCKSIGRGRPTNIHGMVPALTTKSKSCPNINLGIPEEKRATKRQVAPEGCFTV 62

Query: 65  YVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGF 124
           YVG + QRFV+K E A+HPLFKMLL+EA+ E+GY+S+ PL LPC V  FY+VL +MDD  
Sbjct: 63  YVGSQKQRFVVKTEHANHPLFKMLLEEAESEFGYDSRGPLVLPCDVEIFYKVLMEMDDCG 122

Query: 125 D--VLHGHGSQKLYGSHHLFIPSR 133
           D  V  G G  K YGS+HL  PSR
Sbjct: 123 DQKVPQGCGLAKRYGSYHLLTPSR 146

BLAST of Carg15455 vs. ExPASy TrEMBL
Match: A0A2I4DXF0 (auxin-responsive protein SAUR32-like OS=Juglans regia OX=51240 GN=LOC108984355 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 68/144 (47.22%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 2   KAFIFTSPWKCCKSIDNGSITSLVEDEE-------------AIVDKHRPRKLRVAPEGYF 61
           K  +    W+ CKSI  G   S   +               ++ ++  PRK RVAPEG F
Sbjct: 9   KKGLIIKTWERCKSIGRGRKGSSGPERTLTLKTRSCPSLSISLEEEKHPRKRRVAPEGCF 68

Query: 62  SVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDD 121
           SVYVG + Q+FVIK E A+HPLFKMLL+EA+ EYGY++Q PL LPC V  F++VL +M+D
Sbjct: 69  SVYVGPQKQKFVIKTEYANHPLFKMLLEEAESEYGYDNQGPLVLPCNVDIFHKVLLEMED 128

Query: 122 GFDVLHGHGSQKLYGSHHLFIPSR 133
           G D+  G    K YGS+HL  PSR
Sbjct: 129 GRDIQKG-CVFKRYGSYHLLSPSR 151

BLAST of Carg15455 vs. ExPASy TrEMBL
Match: A0A5N6R404 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009400 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25
Identity = 73/149 (48.99%), Postives = 90/149 (60.40%), Query Frame = 0

Query: 2   KAFIFTSPWKCCKSIDNG----------------SITSLVEDEEAIVDKHRPRKLRVAPE 61
           K  +    W+ CKSI +G                S  SLVE+E+      R RK RVAPE
Sbjct: 10  KKGLIIKTWERCKSIGSGRKRGSGTVRGLTLKSKSWPSLVEEEK------RARKRRVAPE 69

Query: 62  GYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRK 121
           G FSVYVG E Q+FVIK E A+HPLF+MLL+EA+ EYGY +Q PL LPC V  F +VL +
Sbjct: 70  GCFSVYVGPEKQKFVIKTEYANHPLFQMLLEEAESEYGYVNQGPLVLPCNVDIFSKVLVE 129

Query: 122 MDDGFDVLHGHGSQKLYGSHHLFIPSRWM 135
           M+D   + HG G  K YGS+HL  PSR +
Sbjct: 130 MEDCRQIHHGCG-LKRYGSYHLLSPSRML 151

BLAST of Carg15455 vs. ExPASy TrEMBL
Match: A0A6J1D5E1 (auxin-responsive protein SAUR71-like OS=Momordica charantia OX=3673 GN=LOC111017463 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 70/138 (50.72%), Postives = 85/138 (61.59%), Query Frame = 0

Query: 10  WKCCKSIDNGSITSL-----------------VEDEEAIVDKHRPRKLRVAPEGYFSVYV 69
           W+ CKSI  G  +S                  +E EEA  +K R R  RVAPEG F+VYV
Sbjct: 15  WERCKSIGRGRRSSASGGIKRFLTRKTKSWPRLEAEEAAEEKRRRR--RVAPEGCFTVYV 74

Query: 70  GVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVLRKMDDGFDV 129
           G E QRFV+K E A+HPLF+MLL+EA+ EYG+NSQAPLWLPC V  FYRVL +M D  D+
Sbjct: 75  GAERQRFVVKTESANHPLFRMLLEEAEAEYGFNSQAPLWLPCHVDSFYRVLTEM-DAADL 134

Query: 130 LHGHGSQKLYGSHHLFIP 131
             G+   K  GS+H   P
Sbjct: 135 RRGY--PKRLGSYHQLSP 147

BLAST of Carg15455 vs. TAIR 10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14
Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0

Query: 25  VEDEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGY 84
           +ED ++   K +P+K      G+F+VYVG   QR V+K +  +HPLFK LL++A+ EYGY
Sbjct: 38  LEDAKSNESKGKPKK-ESPSHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGY 97

Query: 85  NSQAPLWLPCKVGRFYRVLRKM---------DDGFDVLHGHGSQKLYG 124
               P+ LPC+V  F++ L  M         DD +D   G  +  + G
Sbjct: 98  RRDGPIVLPCEVDFFFKALADMKSNPGHHDHDDDYDDDDGFTNSPICG 144

BLAST of Carg15455 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 41  RVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFY 100
           R  P+G+  VYVG E +RFVI +    HPLF+ LLD+A+  YG+++ + LW+PC    F 
Sbjct: 47  RDVPKGHLVVYVGEEYKRFVININLLKHPLFQALLDQAQDAYGFSADSRLWIPCNESTFL 106

Query: 101 RVLR 105
            V+R
Sbjct: 107 DVVR 110

BLAST of Carg15455 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 27  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNS 86
           DEE       P  +   P+G  +VYVG E++RF+I     SH LFK+LL++A+ E+G++ 
Sbjct: 66  DEETCQSPEPPHDV---PKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQ 125

Query: 87  QAPLWLPCKVGRFYRVLRKMDDGFDVLH 115
              L +PC+V  F  +L+ M++    LH
Sbjct: 126 SGALTIPCEVETFKYLLKCMENNLKDLH 150

BLAST of Carg15455 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 27  DEEAIVDKHRPRKLRVAPEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNS 86
           DEE       P  +   P+G  +VYVG E++RF+I     SH LFK+LL++A+ E+G++ 
Sbjct: 66  DEETCQSPEPPHDV---PKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQ 125

Query: 87  QAPLWLPCKVGRFYRVLRKMDDGFDVLH 115
              L +PC+V  F  +L+ M++    LH
Sbjct: 126 SGALTIPCEVETFKYLLKCMENNLKDLH 150

BLAST of Carg15455 vs. TAIR 10
Match: AT1G56150.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 0

Query: 44  PEGYFSVYVGVEMQRFVIKVERASHPLFKMLLDEAKLEYGYNSQAPLWLPCKVGRFYRVL 103
           PEG+  VYVG EM+RFV+  E  +HP+F  LL ++  EYGY  Q  L +PC V  F R+L
Sbjct: 39  PEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERIL 98

Query: 104 RKM 107
             +
Sbjct: 99  ESL 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7029107.17.9e-75100.00Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
KAG6597664.11.5e-7398.52Auxin-responsive protein SAUR71, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023539362.13.4e-7094.07auxin-responsive protein SAUR72-like [Cucurbita pepo subsp. pepo][more]
TQE05047.16.7e-2649.31hypothetical protein C1H46_009339 [Malus baccata][more]
XP_017179030.18.8e-2648.61auxin-responsive protein SAUR32-like [Malus domestica] >RXH71631.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Q9SGU22.4e-1047.62Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S... [more]
Q9LTV32.4e-1038.27Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S... [more]
Q9SA491.2e-0942.03Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S... [more]
P322951.9e-0743.08Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
O645382.5e-0737.88Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A540N1V83.3e-2649.31Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_009339 PE=3 SV=1[more]
A0A498HR564.3e-2648.61Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_025132 PE=3 SV=1[more]
A0A2I4DXF01.2e-2547.22auxin-responsive protein SAUR32-like OS=Juglans regia OX=51240 GN=LOC108984355 P... [more]
A0A5N6R4041.6e-2548.99Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009400 PE=3 SV=1[more]
A0A6J1D5E12.1e-2550.72auxin-responsive protein SAUR71-like OS=Momordica charantia OX=3673 GN=LOC111017... [more]
Match NameE-valueIdentityDescription
AT5G50760.11.7e-1437.04SAUR-like auxin-responsive protein family [more]
AT2G37030.15.9e-1245.31SAUR-like auxin-responsive protein family [more]
AT5G20810.15.9e-1237.50SAUR-like auxin-responsive protein family [more]
AT5G20810.25.9e-1237.50SAUR-like auxin-responsive protein family [more]
AT1G56150.11.7e-1147.62SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 37..104
e-value: 2.3E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 7..108
NoneNo IPR availablePANTHERPTHR31374:SF118OS02G0305950 PROTEINcoord: 7..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15455-RACarg15455-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin