Carg15322 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCATGTCCAGATTTTTTTCCCTCCCAAATTCTTTTTTCGAGGGTTATTTCTCCATATATACCCTCCCCAAAATACCTACCGTTTATATTTAATATGATTATATATTTATTATTATTACTTTCGCTCTGGTTTCCACCCTCTTATAAAAAAAAATATTTTAATCAACGTTGGATTTTACAATCCACTCATTTGGGGCTAGCATCCTCAAGTTTCCACGTTCTTGTAAGTAATATTTCAACCGCTATGTAATCTTACAAACCACTCCTTTGGTGCCCTAGCGTTCATTCTCGAGTTTTTACACCTTTACAAGAAATACTTGAAGCGATGTGAGATCTTACAATCCACCCCTTTGGGATCCAACGTCCTCACTAACACGTCGTTCAGTGTCTAGTTCTGATACAATTTGTAACAGCGCGAACTCACCGCTAGTAAATATTGTCGGCTTTAATTAATTACGTATTGCCATCAAACTGGCGGGTTTGTAATGGAAAATCTAGGATTAATGTGGAGGGTGAAGATATGAAGGAAAGGATAAGCAGGTGATTATTGGGTGCCGGTTCGGGTAGGGTTTGGGAATCCGGTTGGCGATTTGCACCGCAGAGAGATGTAAACGGGACGGGAACAAAGAAGCCAACACAACTATAAATTCACTTCTCGGCGGAAAGGCGGAGAAGTCACTAACTTCGTCTTCCACAACTAAAACTAAGAGGGGACTTCTATTCTACGTCGATTCTGCTTCTCTTCTGCTTCTTCGTCCGATTCTACCTTCTCCCTGCTGCTTTTCGTTGACGATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCGTAAGCAATATTTATCTCTCGTTTCTTTTTAACCACCTTCGGTTGATTATCGAGAAAGTCAAGATCACGAGATCTTTTTCTGCGAGTGCTATCGTCTTCTTGCCTAATGTGTTGATTTTATATATTTGAGGTGATGAATTCGAGTTGTGTTTTTAGGATACGAGATGGTAGTGGACATGGAGAGTCCAGTAGTTGGAATGATGCTGGATATATTAGTGATTTTAGCTGTTTTTATATGTTACTTCTTTATATTTTAGATCGGTTTCGCCGACTATGAGGAGGTGGTTGGTGGTGAGATCTAGGCTTAGTTGATTGTGGAAATTGTTTTACTTTTTGATGTGGATGCTGAAATGATTGTAACCTAAATGAAGCGTCGTGGTTATTGTGCGAGGTGAACGCGTTTTGCTTTGGAATTGCTTCTTAAAACTAGTAGAAGTTGGTAGAGATGGATGGTGTCTATGAATTAATCTTTTAAAGCAAAGCCCAAAACTTGATCACAACGCATTATGTAAATACGCTTGTGATTAGAGTTCTTCCGTTCTTCAGATTCACCAATAGAAGAACTGCCATACTAACTAAAGATTTCATTGTTGAGAAAGTTTAAGATGGCTGAAAATTGCACTGCTAACTTCAGTTTCTGAATTAATTGTAGTTGCCGGAACCTCCACGCGTCCACGCACGTTCAAACAGGTTCTCTCTCTCTCTCTCTCTCTGTATCTTAAGACACGCACACACTTAGTTCCCTCTACCAACAACATATAATTACAATGCCCGGTAGTTGGGTTTGTCAATTGGGTATGGATAATACTCTGATGTGTTGCAACTTTTCCTTCTGCTGCTGCTTCTTCAACTGCATGGTCTTGTTCTTTCTATTTACTTATTTTTCTGCACATGATGTATTTAATTTATTATTATAGGTAGAAGCTGAACACAAGGAGGAGGAAGAATCTGAGGAAGGATCCGAACAAGAATCGGGAGATGAAACTGATGATGAGGATAAACCTAGAGTTTGTATTCAATCACATTTTTTTTTCTTTAATCTACAAGTCTGATCGTCTACATATTTTGTTGTTTGTTTGAGCTGAGCGAGACTAAGTCACTTAATATGTTGTTAAATTCTGCCAGAGGAAAGGCACTCAAGGTATTATTGAGATTGAAAATCCTAACTTGGTGAAGCCAAAAACCTTGAAAGCTAGAGATATTGATGTAAGTTTAATAATCATCCTTACGGAAGGTTTTGCATTGAACATTGTTATACAGTGGAGGTGTAATTTCACTTCATTTTGCAGATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGGTTGTTACAAAGCTCTATTTTCTTTGTTTTAACGAATATTTAACATTTACTTAATTTTTATGTTTATAGTTGATTTTTCTTTAATTCTTTTTCCAGAGAGGAGATAGAGAAACAAAAGGCTCATGAGCGATACATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGGTAATCCTCTTTCAATGATCAATTCTCTGGTTTAAGTGTGTGTTCTATGTTCTGAGGATGAAACCTTTTTATTATCGATGTGTCATCCAAGATTCATATGCATTTTCTTTCATTCTTTTCCTGAGTTAAAAGGGAAAAACATATAGGAATGCTCAGAATGATCACCTGCTGTTGCACTTGCTTTGTATTCAGCGTCTTGCACATTCACATTGTATAAATTTGGTTCAAAATGCGCTTTGATAACATCATGGGGAACCAATGCTATGTCCTGAACAACTTTTTTCATGTGCACCATTGATAGCTGTTGAAGGGTGTGAAAAAAATTTGAAGCCATAACTTTCATTGCACTGTCTTAGAACTCAACGATACAGTTATACAGCCTAAAGAACAGATTCTGTTCAAGTAAGGTCATAATTGGTTTGTCTGATATTGAAATTTTATTTCACCATATGCTGTGCAGAACGTTTGTCTCTTATTCGTCAACAAAGGGCAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGGTAATATATACAACAGAACACTATCACTATATAGTTCTTATAGTAACATTTCCTTGTAACATTGAAACTGATATCCACTCTCTCCCCCTCACTTTCAGCCAAAGAACAGAAGAAAGCAGAAGCTCGCAAATGAGCTCCGGGACCCTCCGAGTTCTTTTCTCTGGGACGAAAGACATGTAATCTCTACAATTTTACTTTCTAGTTTGCCTAGACTAATATTGTCAGCAACCAAGTTATATTCTCTTATTTGGCACAGAAGTGACCATAGTATTAAGCCGTTTTACATTTATAATTTACGCAAGTATACTTCTTATATCTCTACGGCATAAGAGGTTTGATTCAATATGACTTTAATATTAGGTTATAACCTTTATTCTCTACGCCTTTATACCTTATCAATTTAGAATATGTTTCCATTTTCTTCTTTAAATATTGGCCTAGAATACTTCTGAGA ATGTTCCATGGTTTGGGAATCCGGTTGGCGATTTGCACCGCAGAGAGATGTAAACGGGACGGGAACAAAGAAGCCAACACAACTATAAATTCACTTCTCGGCGGAAAGGCGGAGAAGTCACTAACTTCGTCTTCCACAACTAAAACTAAGAGGGGACTTCTATTCTACGTCGATTCTGCTTCTCTTCTGCTTCTTCGTCCGATTCTACCTTCTCCCTGCTGCTTTTCGTTGACGATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCGATACGAGATGGTAGTGGACATGGAGAGTCCAGTAGTTGGAATGATGCTGGATATATTAGTGATTTTAGCTGTAGAAGCTGAACACAAGGAGGAGGAAGAATCTGAGGAAGGATCCGAACAAGAATCGGGAGATGAAACTGATGATGAGGATAAACCTAGAAGGAAAGGCACTCAAGGTATTATTGAGATTGAAAATCCTAACTTGGTGAAGCCAAAAACCTTGAAAGCTAGAGATATTGATATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGAGAGGAGATAGAGAAACAAAAGGCTCATGAGCGATACATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGAACGTTTGTCTCTTATTCGTCAACAAAGGGCAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGCCAAAGAACAGAAGAAAGCAGAAGCTCGCAAATGAGCTCCGGGACCCTCCGAGTTCTTTTCTCTGGGACGAAAGACATGTAATCTCTACAATTTTACTTTCTAGTTTGCCTAGACTAATATTGTCAGCAACCAAGTTATATTCTCTTATTTGGCACAGAAGTGACCATAGTATTAAGCCGTTTTACATTTATAATTTACGCAAGTATACTTCTTATATCTCTACGGCATAAGAGGTTTGATTCAATATGACTTTAATATTAGGTTATAACCTTTATTCTCTACGCCTTTATACCTTATCAATTTAGAATATGTTTCCATTTTCTTCTTTAAATATTGGCCTAGAATACTTCTGAGA ATGTTCCATGGTTTGGGAATCCGGTTGGCGATTTGCACCGCAGAGAGATGTAAACGGGACGGGAACAAAGAAGCCAACACAACTATAAATTCACTTCTCGGCGGAAAGGCGGAGAAGTCACTAACTTCGTCTTCCACAACTAAAACTAAGAGGGGACTTCTATTCTACGTCGATTCTGCTTCTCTTCTGCTTCTTCGTCCGATTCTACCTTCTCCCTGCTGCTTTTCGTTGACGATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCGATACGAGATGGTAGTGGACATGGAGAGTCCAGTAGTTGGAATGATGCTGGATATATTAGTGATTTTAGCTGTAGAAGCTGAACACAAGGAGGAGGAAGAATCTGAGGAAGGATCCGAACAAGAATCGGGAGATGAAACTGATGATGAGGATAAACCTAGAAGGAAAGGCACTCAAGGTATTATTGAGATTGAAAATCCTAACTTGGTGAAGCCAAAAACCTTGAAAGCTAGAGATATTGATATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGAGAGGAGATAGAGAAACAAAAGGCTCATGAGCGATACATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGAACGTTTGTCTCTTATTCGTCAACAAAGGGCAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGCCAAAGAACAGAAGAAAGCAGAAGCTCGCAAATGA MFHGLGIRLAICTAERCKRDGNKEANTTINSLLGGKAEKSLTSSSTTKTKRGLLFYVDSASLLLLRPILPSPCCFSLTMGRGKYKSKPTGRRQFSTPEDMRYEMVVDMESPVVGMMLDILVILAVEAEHKEEEESEEGSEQESGDETDDEDKPRRKGTQGIIEIENPNLVKPKTLKARDIDIGKTTELSRREREEIEKQKAHERYMRLQEQGKTEQARKDLERLSLIRQQRAEAAKKREEEKAAKEQKKAEARK Homology
BLAST of Carg15322 vs. NCBI nr
Match: KAG7034622.1 (28 kDa heat- and acid-stable phosphoprotein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of Carg15322 vs. NCBI nr
Match: KAG6581338.1 (28 kDa heat- and acid-stable phosphoprotein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 397.5 bits (1020), Expect = 8.6e-107 Identity = 228/254 (89.76%), Postives = 231/254 (90.94%), Query Frame = 0
BLAST of Carg15322 vs. NCBI nr
Match: XP_022925842.1 (28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita moschata] >XP_022978774.1 28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita maxima]) HSP 1 Score: 253.4 bits (646), Expect = 2.0e-63 Identity = 153/176 (86.93%), Postives = 154/176 (87.50%), Query Frame = 0
BLAST of Carg15322 vs. NCBI nr
Match: XP_023543121.1 (28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252.3 bits (643), Expect = 4.5e-63 Identity = 152/176 (86.36%), Postives = 154/176 (87.50%), Query Frame = 0
BLAST of Carg15322 vs. NCBI nr
Match: XP_038883580.1 (28 kDa heat- and acid-stable phosphoprotein [Benincasa hispida]) HSP 1 Score: 243.4 bits (620), Expect = 2.1e-60 Identity = 149/177 (84.18%), Postives = 154/177 (87.01%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy Swiss-Prot
Match: Q3UHX2 (28 kDa heat- and acid-stable phosphoprotein OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19 Identity = 78/191 (40.84%), Postives = 112/191 (58.64%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy Swiss-Prot
Match: Q62785 (28 kDa heat- and acid-stable phosphoprotein OS=Rattus norvegicus OX=10116 GN=Pdap1 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19 Identity = 78/191 (40.84%), Postives = 112/191 (58.64%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy Swiss-Prot
Match: Q13442 (28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens OX=9606 GN=PDAP1 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18 Identity = 76/191 (39.79%), Postives = 113/191 (59.16%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy Swiss-Prot
Match: Q556U5 (28 kDa heat- and acid-stable phosphoprotein homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273095 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.5e-08 Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy TrEMBL
Match: A0A6J1IUZ4 (28 kDa heat- and acid-stable phosphoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111478634 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 9.7e-64 Identity = 153/176 (86.93%), Postives = 154/176 (87.50%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy TrEMBL
Match: A0A6J1ECQ7 (28 kDa heat- and acid-stable phosphoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111433129 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 9.7e-64 Identity = 153/176 (86.93%), Postives = 154/176 (87.50%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy TrEMBL
Match: A0A5D3CQ74 (28 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007860 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60 Identity = 148/177 (83.62%), Postives = 153/177 (86.44%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy TrEMBL
Match: A0A1S3AZ63 (28 kDa heat- and acid-stable phosphoprotein OS=Cucumis melo OX=3656 GN=LOC103484483 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60 Identity = 148/177 (83.62%), Postives = 153/177 (86.44%), Query Frame = 0
BLAST of Carg15322 vs. ExPASy TrEMBL
Match: A0A0A0KHS1 (PP28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518250 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 8.5e-60 Identity = 147/177 (83.05%), Postives = 153/177 (86.44%), Query Frame = 0
BLAST of Carg15322 vs. TAIR 10
Match: AT5G46020.1 (CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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