Carg15280 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTTTCTGGAAGCTTTGGCGGTTCATGTCGTTGGTACATCACAAAAACAGGAACTCGTTGCGAAGGCCATCTCTCCGCTTCTGAATTTCAACCATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGTACTCCAGAGCTCCCTTGAAAGTATCGCGATGTCATTTCTTTCTTGCTTGTTTGCCGCCTAATCTGAGATTCCTGTTAATGCAGCTTATCCTTTATTTTTCTCCAACGAAGTTATGATTTGGACATGGTTCTGGGGGTTTACTTTGAGGTTAACGTATCATTGTCGATATTTTCTGTTCGATTTCGCTCTTGAGATCTGATTGTCTCTGCAGTCGACTGTAGCAAATAATGCAGTTGAATTTTTTTTGGGATTTGCTCTTCGAGTACCCTTATAATGCAGTTGGATGTTCCGTTCCTTCTTGTATACACACCTTGCTAGGTGATTCCCTTGTATGCTTAGTTTTTAGGTGGATTTTCTTTGTTCTGATTGTGTACAATTCGGTATCAAATATCTACTTTTCTGAAGAATGGTGCTGTTTTTGCAATGTTTTTAGGATGATGCTGATGCATGTGATCATTGTGTTATTTGGAGTCGGAAAAGATTTAAAAAAACTGAACACCTTTTTTGCAATTTCCTGAAAATGGATGGAATTTTAAACTATAGGATGATACATGAATTTGTTAATTCGATCCTACATGTATGACCGAACTTAGAATTGGTGGATGGTTTAATTGTACCTATTCAGTTAATAAGAATAATAACAGTCCTGTTCAGTTCAGTTTTTCATATTGTTAGAGGATTTTCCGTGCATCTCTGATGTGGTATCCTCAGCATCTTTCGTAGCTAAGAATCAGATTAATGATTAGTTGGAGTACAAGGCTACAATTGATCTCCTTTTTGTGTTTACACATAACCTTGCTTGCATGAGATTGCTGAAGAAACCAGCCAGCTTCCTTTCTGGGGTGGTTCATGAGTTCCTTCTACAATTCTTGTTGTTGTGTATGTTCTGGTTCATGGTGACGAACAGTTAATATTGGCCTTGGTGCACAGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGAAAAGGGAGAGACTAAAGCAAGGTATCTCTGCACCTGGCGAGTAGGAGTTAGTGCTAGCCTTTTCTCTTATGTGCTATATTCCTGTGCCGCACTTGGGGGAACTAACAAGTTCTTCCATTTCAGTGATTGAAGAGTAGTTTTGTTTATGTTGTTAAGTTGTTCAGAATCTGAACATTATAACCGGAAGTTCATAGTCCCTTGTATCCTTAGAGATGAGAAATGATAGTAAGAGAGTAGTTTATATGGTATATTTTGATCCAATGCTGTTTGCCTTGCCTTTCTTGCCAATCCAAGGATTTTCTGATTCACATTGGCTACCAGGAATATACACAAAATAGATTAAGGAGAAGGGAATAGTTGGTAACTTGGACATGCTCACATTTAACAATATAGTTATAGTTCGATATGTTAGAGTTCTCCTAGCGATATTTGATTCGGTTTCTTGTTTGATTCTTTATTTCTTTTTGAGCTCGTAAACGTGTAAACGTGCCTGGTTTAAAGATACAAGAAATAGCACAATAATTTTTTAACATTCAAACTTTAGGAAACAAAGCTGGCCCTGGTGGCCAAGAATCTTCAACAAATTCTATACACAAAGGAACAAAATATTATTCACAAATAGGAAATGTCGTCTTATTCTGAAACCTCGTCAGAATATTTTTCCCTTTGAAAACTTAACATCCGAGACTCATCAGCCCCTAATACATTGCAGGTCAGCAGCAAGACGCCACTGCAAAAGAACATGGAAAGCAGGAGGAAGATGATCTCAGACTCCACGCCCCATGGACTGTTCTGCAGGTGGGATCATGACTAACACAGGACGAGCATTGAACCCTGGGTGAGGCATCCTCCGACGAAGTTCACGACCTTCCTGGCAAAGTGCACAGGTGTGACAGAAGACATGAGTTGCAAAGTCACAGACAGATTCACAGTGCTCACGCTGAACTTCGTCTTCAACACAGAGTCCGCAACAGCCACATGACCTATGAAGTGCCTCGCAGTTACCCTGCTCGTCATGAAACAAGGTAATGTATAAACTTTCCCATCAATTGAATTGAATGTCAAGTCATGCATTCATTTGCAGATATTGAGAATCAAGAATGGTAAAGGAGAAGGTTCAACTTGCCTCCAGATTGAACATTCGGCGGATAGCTGTGCGGGTAGGAAATGTAAACCATGGAGCAAGGCAGTTCCAACCAAAGAAAGAGGTTCCAATTAAGTAGAGACCAGAATATGACATGCAATGGTTTGCAAAAGTCCCAGGAGTAGACCCAAGTCTCTCTGCGTTGCTTCCATACAGCATACAAGGAGCCACACTTCCAATAAGACCTACAAACACTCATTGTAAGTTGCTTTCCCTTATTTTCTCCTAATTTCATTTCACTTTCTTCCCTAATTTTACCTCTTCAAGTTGAAGCAAGAAGTAAAACCCTAGTAGTCAATAGAAATCCCTCCCTAAAGAAGTTTATAGCAATACCCTCCTATAAATGTGTTGAATTCCTCCAGCCCCTCCTCCCCGTGAAAATAAGGATTCCTTTTCTTATTGTAATCCAGGCCCCATCGAGACCCCAAGGATCAGAATGGGTATTTATTGGAAGATTAAGGATTAGGGAACTTGTTTATTCAAACCAATTAAAAGTGATAAGAATGGTATTAGAGATCCAAGAATTCTGCATAGCCCAGATCTTATCTGAAACTCTATTTGAAGAAACAACAGAATACTCCTGCCTAAAGAAGTGCTAGCATATTAAGATCATGGTGGATAAGGCACCCTATCTAAAGTAAGAAGAAGAATATTTTGGTAGGAATAAGCTACAAACCCAAAAATCAGGGAAAACGAATCACGTATCCCCAAAGCCTAACCTTTCAGCAAAAACTCAATTCAAATGAAGAAAACGAATCGACTTACAAACTTCTAGATCGCTACTGCAGAACTCATC TATTTTTCTGGAAGCTTTGGCGGTTCATGTCGTTGGTACATCACAAAAACAGGAACTCGTTGCGAAGGCCATCTCTCCGCTTCTGAATTTCAACCATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGAAAAGGGAGAGACTAAAGCAAGGTATCTCTGCACCTGGCGAAATCTGAACATTATAACCGGAAGTCAGCAGCAAGACGCCACTGCAAAAGAACATGGAAAGCAGGAGGAAGATGATCTCAGACTCCACGCCCCATGGACTGTTCTGCAGATATTGAGAATCAAGAATGGTAAAGGAGAAGGTTCAACTTGCCTCCAGATTGAACATTCGGCGGATAGCTGTGCGGGCCCCATCGAGACCCCAAGGATCAGAATGGGTATTTATTGGAAGATTAAGGATTAGGGAACTTGTTTATTCAAACCAATTAAAAGTGATAAGAATGGTATTAGAGATCCAAGAATTCTGCATAGCCCAGATCTTATCTGAAACTCTATTTGAAGAAACAACAGAATACTCCTGCCTAAAGAAGTGCTAGCATATTAAGATCATGGTGGATAAGGCACCCTATCTAAAGTAAGAAGAAGAATATTTTGGTAGGAATAAGCTACAAACCCAAAAATCAGGGAAAACGAATCACGTATCCCCAAAGCCTAACCTTTCAGCAAAAACTCAATTCAAATGAAGAAAACGAATCGACTTACAAACTTCTAGATCGCTACTGCAGAACTCATC ATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGAAAAGGGAGAGACTAAAGCAAGGTATCTCTGCACCTGGCGAAATCTGAACATTATAACCGGAAGTCAGCAGCAAGACGCCACTGCAAAAGAACATGGAAAGCAGGAGGAAGATGATCTCAGACTCCACGCCCCATGGACTGTTCTGCAGATATTGAGAATCAAGAATGGTAAAGGAGAAGGTTCAACTTGCCTCCAGATTGAACATTCGGCGGATAGCTGTGCGGGCCCCATCGAGACCCCAAGGATCAGAATGGGTATTTATTGGAAGATTAAGGATTAG MEEDFEFGDKVPPAVNRMGNVIGDADGRGFNPGLIVLLVVGGLLLAFLVVNYALYIRPSHHKRRTSFQEEDEKGETKARYLCTWRNLNIITGSQQQDATAKEHGKQEEDDLRLHAPWTVLQILRIKNGKGEGSTCLQIEHSADSCAGPIETPRIRMGIYWKIKD Homology
BLAST of Carg15280 vs. NCBI nr
Match: KAG7034580.1 (hypothetical protein SDJN02_04310 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.8 bits (878), Expect = 1.6e-90 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of Carg15280 vs. NCBI nr
Match: KAG6604436.1 (DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 4.6e-21 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Carg15280 vs. NCBI nr
Match: XP_022926041.1 (DNA-binding protein S1FA-like [Cucurbita moschata]) HSP 1 Score: 112.1 bits (279), Expect = 4.6e-21 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Carg15280 vs. NCBI nr
Match: XP_022979165.1 (DNA-binding protein S1FA-like [Cucurbita maxima]) HSP 1 Score: 104.4 bits (259), Expect = 9.7e-19 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of Carg15280 vs. NCBI nr
Match: XP_038881351.1 (DNA-binding protein S1FA-like [Benincasa hispida]) HSP 1 Score: 100.1 bits (248), Expect = 1.8e-17 Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.1e-04 Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 4.1e-04 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2) HSP 1 Score: 45.8 bits (107), Expect = 5.4e-04 Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy TrEMBL
Match: A0A6J1EDS2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111433279 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.3e-21 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy TrEMBL
Match: A0A6J1ISG2 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111478884 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.7e-19 Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy TrEMBL
Match: A0A6J1I6D0 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111471126 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.2e-17 Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy TrEMBL
Match: A0A6J1HDT2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of Carg15280 vs. ExPASy TrEMBL
Match: A0A0A0KEM3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 7.5e-17 Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Carg15280 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of Carg15280 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0
BLAST of Carg15280 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 45.8 bits (107), Expect = 3.8e-05 Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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