Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCCATATTTTGGTGCAATACTAGAATGGGATAGGTCTGCAGCCATGGCTGACTTAGTACTCATCAGACCCAGTGGTGCACCAAGGGCTGTTTAAGCACTAAGAGGGACATTACTCAAAAGCCCGACATTCTGGCGGGACATCGAAGACGACATTCAGTTTCTTGCTTGGGAAAGTTTGAAGGGTTCTGTCAGGTTTAATGTAGCTTTGGAGGCATTGAAATCTTGTGCTGAGAGTTAGGGAAGCAACAATGTTTGTATTCCTGGTCATTCCTTAGGTGCTGGGTTTGCTCTACAGATGGGGAAGGCCTTAGCTAAAGAAGGAATACAAACATTGTTGCAGTAGCTATGAGCTTGAAGAACATAGGGGAAAAGGCAGAGTTTGCTTGGAAGAGAATCAAATCAATGCTTCATTCAGGCAGGGAAACAACAGAGAACAGCAATAGTTTAGGAGAAAAAACATCAACAGCAGCTGGTTCGAGGAGTTGGGTATCGAATCTAAACATGCTGAAGAATCCAGGGAAGTAGGTCGCACATCTATATGTAAATAACATGCTGTTCATATACTGAATCTGATCAAGTAGAGAAAAGCAATGAAGGGAAAGAAAATGTTACCCCCACAAATGGGAATGGGAAAGTGGCGGCAGCTGCAGCAAAGTTGTTTGTGATGTCAATGGGAAAACATAAGTTTCTTGAAGCTCATGGATTGGAACAATGGTGGTCTGATGATTTGCAGCATCAGCTAGCTCTCCATGACAGCAAGCAGCTTAAATCCTTGTACACCCTTGCATCAGCACAACAACCAACACCGGGGCGTCCCAGCCGGTGA
mRNA sequence
ATGGGTCCATATTTTGGTGCAATACTAGAATGGGATAGGTCTGCAGCCATGGCTGACTTAGTACTCATCAGACCCAGTGGTGCACCAAGGGCTGGTTCTGTCAGGTTTAATGTAGCTTTGGAGGCATTGAAATCTTGTGCTGAGATAGCTATGAGCTTGAAGAACATAGGGGAAAAGGCAGAGTTTGCTTGGAAGAGAATCAAATCAATGCTTCATTCAGGCAGGGAAACAACAGAGAACAGCAATAGTTTAGGAGAAAAAACATCAACAGCAGCTGAGAAAAGCAATGAAGGGAAAGAAAATGTTACCCCCACAAATGGGAATGGGAAAGTGGCGGCAGCTGCAGCAAAGTTGTTTGTGATGTCAATGGGAAAACATAAGTTTCTTGAAGCTCATGGATTGGAACAATGGTGGTCTGATGATTTGCAGCATCAGCTAGCTCTCCATGACAGCAAGCAGCTTAAATCCTTGTACACCCTTGCATCAGCACAACAACCAACACCGGGGCGTCCCAGCCGGTGA
Coding sequence (CDS)
ATGGGTCCATATTTTGGTGCAATACTAGAATGGGATAGGTCTGCAGCCATGGCTGACTTAGTACTCATCAGACCCAGTGGTGCACCAAGGGCTGGTTCTGTCAGGTTTAATGTAGCTTTGGAGGCATTGAAATCTTGTGCTGAGATAGCTATGAGCTTGAAGAACATAGGGGAAAAGGCAGAGTTTGCTTGGAAGAGAATCAAATCAATGCTTCATTCAGGCAGGGAAACAACAGAGAACAGCAATAGTTTAGGAGAAAAAACATCAACAGCAGCTGAGAAAAGCAATGAAGGGAAAGAAAATGTTACCCCCACAAATGGGAATGGGAAAGTGGCGGCAGCTGCAGCAAAGTTGTTTGTGATGTCAATGGGAAAACATAAGTTTCTTGAAGCTCATGGATTGGAACAATGGTGGTCTGATGATTTGCAGCATCAGCTAGCTCTCCATGACAGCAAGCAGCTTAAATCCTTGTACACCCTTGCATCAGCACAACAACCAACACCGGGGCGTCCCAGCCGGTGA
Protein sequence
MGPYFGAILEWDRSAAMADLVLIRPSGAPRAGSVRFNVALEALKSCAEIAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAAEKSNEGKENVTPTNGNGKVAAAAAKLFVMSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPGRPSR
Homology
BLAST of Carg14782 vs. NCBI nr
Match:
KAG7037490.1 (hypothetical protein SDJN02_01117, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 338.2 bits (866), Expect = 4.2e-89
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 1 MGPYFGAILEWDRSAAMADLVLIRPSGAPRAGSVRFNVALEALKSCAEIAMSLKNIGEKA 60
MGPYFGAILEWDRSAAMADLVLIRPSGAPRAGSVRFNVALEALKSCAEIAMSLKNIGEKA
Sbjct: 1 MGPYFGAILEWDRSAAMADLVLIRPSGAPRAGSVRFNVALEALKSCAEIAMSLKNIGEKA 60
Query: 61 EFAWKRIKSMLHSGRETTENSNSLGEKTSTAAEKSNEGKENVTPTNGNGKVAAAAAKLFV 120
EFAWKRIKSMLHSGRETTENSNSLGEKTSTAAEKSNEGKENVTPTNGNGKVAAAAAKLFV
Sbjct: 61 EFAWKRIKSMLHSGRETTENSNSLGEKTSTAAEKSNEGKENVTPTNGNGKVAAAAAKLFV 120
Query: 121 MSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPGRPSR 174
MSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPGRPSR
Sbjct: 121 MSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPGRPSR 173
BLAST of Carg14782 vs. NCBI nr
Match:
KAG6607976.1 (hypothetical protein SDJN03_01318, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0
Query: 51 MSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAA-EKSNEGKENVTPTNGNG 110
MSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAA EKSNEGKENVTPTNGNG
Sbjct: 1 MSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAAVEKSNEGKENVTPTNGNG 60
Query: 111 KVAAAAAKLFVMSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPG 170
KVAAAAAKLFVMSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPG
Sbjct: 61 KVAAAAAKLFVMSMGKHKFLEAHGLEQWWSDDLQHQLALHDSKQLKSLYTLASAQQPTPG 120
Query: 171 RPSR 174
RPSR
Sbjct: 121 RPSR 124
BLAST of Carg14782 vs. NCBI nr
Match:
XP_038897095.1 (LOW QUALITY PROTEIN: GDSL esterase/lipase At4g10955 [Benincasa hispida])
HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 141/296 (47.64%), Postives = 147/296 (49.66%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 104 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 163
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVALEALKS AE
Sbjct: 164 KGSVRFNVALEALKSVAESYGSNNVCVAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 223
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKT------------------ 174
+AMSL+NIGEKAEFAWKRIKSML SG ETTENSN EK
Sbjct: 224 VSVAMSLRNIGEKAEFAWKRIKSMLPSGNETTENSNIEEEKAYGGAGLKSWVSNLNRLKN 283
BLAST of Carg14782 vs. NCBI nr
Match:
XP_022132245.1 (GDSL esterase/lipase At4g10955 [Momordica charantia])
HSP 1 Score: 193.0 bits (489), Expect = 2.2e-45
Identity = 139/295 (47.12%), Postives = 146/295 (49.49%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 103 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLVLRGTLLKSPTIRRDIEDDLRFFAWESL 162
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRF VALEALKS AE
Sbjct: 163 KGSVRFKVALEALKSVAESYGSNNVCIAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 222
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAA-------------- 174
+AMSL+NIGEKAEFAWKR+KSML SG ETTE SN GEK AA
Sbjct: 223 VSVAMSLRNIGEKAEFAWKRLKSMLPSGSETTEASNIEGEKPPGAAGLKSWVSNLNRKNP 282
BLAST of Carg14782 vs. NCBI nr
Match:
XP_022936957.1 (GDSL esterase/lipase At4g10955 isoform X2 [Cucurbita moschata])
HSP 1 Score: 191.0 bits (484), Expect = 8.3e-45
Identity = 138/296 (46.62%), Postives = 144/296 (48.65%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 102 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 161
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVAL+ALKS AE
Sbjct: 162 KGSVRFNVALKALKSVAESYGSSNVCIAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 221
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKT------------------ 174
+AMSL+NIGEKAEFAWKRIKSML SG ETT NS+ GEK
Sbjct: 222 VSVAMSLRNIGEKAEFAWKRIKSMLPSGSETTGNSSMEGEKASGGGAGFKNWVANLNRLK 281
BLAST of Carg14782 vs. ExPASy TrEMBL
Match:
A0A6J1BRX2 (GDSL esterase/lipase At4g10955 OS=Momordica charantia OX=3673 GN=LOC111005145 PE=4 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 139/295 (47.12%), Postives = 146/295 (49.49%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 103 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLVLRGTLLKSPTIRRDIEDDLRFFAWESL 162
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRF VALEALKS AE
Sbjct: 163 KGSVRFKVALEALKSVAESYGSNNVCIAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 222
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKTSTAA-------------- 174
+AMSL+NIGEKAEFAWKR+KSML SG ETTE SN GEK AA
Sbjct: 223 VSVAMSLRNIGEKAEFAWKRLKSMLPSGSETTEASNIEGEKPPGAAGLKSWVSNLNRKNP 282
BLAST of Carg14782 vs. ExPASy TrEMBL
Match:
A0A6J1F9S8 (GDSL esterase/lipase At4g10955 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443389 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 4.0e-45
Identity = 138/296 (46.62%), Postives = 144/296 (48.65%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 102 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 161
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVAL+ALKS AE
Sbjct: 162 KGSVRFNVALKALKSVAESYGSSNVCIAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 221
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGEKT------------------ 174
+AMSL+NIGEKAEFAWKRIKSML SG ETT NS+ GEK
Sbjct: 222 VSVAMSLRNIGEKAEFAWKRIKSMLPSGSETTGNSSMEGEKASGGGAGFKNWVANLNRLK 281
BLAST of Carg14782 vs. ExPASy TrEMBL
Match:
A0A5D3CGI8 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00550 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 9.0e-45
Identity = 134/291 (46.05%), Postives = 144/291 (49.48%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 106 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 165
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVALEALKS AE
Sbjct: 166 KGSVRFNVALEALKSVAESYGSNNVCVAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 225
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGE-------------------- 168
+AMSL+NIGEKAEFAWKRIKSM+ SG ETTENS+++ E
Sbjct: 226 VSVAMSLRNIGEKAEFAWKRIKSMIPSGSETTENSSNIEEEKSYGVTGLKSWVSNLNRLK 285
BLAST of Carg14782 vs. ExPASy TrEMBL
Match:
A0A1S4E575 (GDSL esterase/lipase At4g10955 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103503049 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 9.0e-45
Identity = 134/291 (46.05%), Postives = 144/291 (49.48%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 48 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 107
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVALEALKS AE
Sbjct: 108 KGSVRFNVALEALKSVAESYGSNNVCVAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 167
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGE-------------------- 168
+AMSL+NIGEKAEFAWKRIKSM+ SG ETTENS+++ E
Sbjct: 168 VSVAMSLRNIGEKAEFAWKRIKSMIPSGSETTENSSNIEEEKSYGVTGLKSWVSNLNRLK 227
BLAST of Carg14782 vs. ExPASy TrEMBL
Match:
A0A1S3CNX1 (GDSL esterase/lipase At4g10955 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103503049 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 9.0e-45
Identity = 134/291 (46.05%), Postives = 144/291 (49.48%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGAILEWDRSAAMADLVLIRPSGAPRA
Sbjct: 85 GSIFGAILEWDRSAAMADLVLIRPSGAPRAVLALRGTLLKSPTIRRDIEDDLRFLAWESL 144
Query: 62 -GSVRFNVALEALKSCAE------------------------------------------ 121
GSVRFNVALEALKS AE
Sbjct: 145 KGSVRFNVALEALKSVAESYGSNNVCVAGHSLGAGFALQVGKALAKEGIYVETHLFNPPS 204
Query: 122 --IAMSLKNIGEKAEFAWKRIKSMLHSGRETTENSNSLGE-------------------- 168
+AMSL+NIGEKAEFAWKRIKSM+ SG ETTENS+++ E
Sbjct: 205 VSVAMSLRNIGEKAEFAWKRIKSMIPSGSETTENSSNIEEEKSYGVTGLKSWVSNLNRLK 264
BLAST of Carg14782 vs. TAIR 10
Match:
AT5G50890.1 (alpha/beta-Hydrolases superfamily protein )
HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 100/288 (34.72%), Postives = 121/288 (42.01%), Query Frame = 0
Query: 2 GPYFGAILEWDRSAAMADLVLIRPSGAPRA------------------------------ 61
G FGA+LEWDR+AAMADLV+IRPSGAP+A
Sbjct: 123 GSIFGAVLEWDRAAAMADLVVIRPSGAPKAVLALRGTILKSLTMRRDIEDDLRFLAWESL 182
Query: 62 -GSVRFNVALEALKSCA------------------------------------------- 121
GSVRFNVALEAL+S A
Sbjct: 183 KGSVRFNVALEALQSVATRYGSSNVCVVGHSLGAGFALQVGKSLAKEGLFVDAHLFNPPS 242
Query: 122 -EIAMSLKNIGEKAEFAWKRIKSMLHSGRE-TTENSNS---------------------- 161
+AMSL+NI EKA AWKR+ SML E +NSN
Sbjct: 243 ISVAMSLRNISEKAGVAWKRLMSMLPPKHEPLIQNSNEGQVSPSNVSSGFRNWVPSFYGS 302
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7037490.1 | 4.2e-89 | 100.00 | hypothetical protein SDJN02_01117, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6607976.1 | 2.3e-58 | 99.19 | hypothetical protein SDJN03_01318, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038897095.1 | 1.8e-47 | 47.64 | LOW QUALITY PROTEIN: GDSL esterase/lipase At4g10955 [Benincasa hispida] | [more] |
XP_022132245.1 | 2.2e-45 | 47.12 | GDSL esterase/lipase At4g10955 [Momordica charantia] | [more] |
XP_022936957.1 | 8.3e-45 | 46.62 | GDSL esterase/lipase At4g10955 isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BRX2 | 1.1e-45 | 47.12 | GDSL esterase/lipase At4g10955 OS=Momordica charantia OX=3673 GN=LOC111005145 PE... | [more] |
A0A6J1F9S8 | 4.0e-45 | 46.62 | GDSL esterase/lipase At4g10955 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A5D3CGI8 | 9.0e-45 | 46.05 | GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504... | [more] |
A0A1S4E575 | 9.0e-45 | 46.05 | GDSL esterase/lipase At4g10955 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10350304... | [more] |
A0A1S3CNX1 | 9.0e-45 | 46.05 | GDSL esterase/lipase At4g10955 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10350304... | [more] |
Match Name | E-value | Identity | Description | |
AT5G50890.1 | 2.1e-25 | 34.72 | alpha/beta-Hydrolases superfamily protein | [more] |