Carg14738 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg14738
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin domain-containing protein
LocationCarg_Chr01: 10046518 .. 10049859 (-)
RNA-Seq ExpressionCarg14738
SyntenyCarg14738
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGGCGCTGTAAACTCAGCTTCGACTTTTGACTTTTTTGGACTCTCAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTCCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTTTCTTCTTGTAATTTTGCGCTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGTGAGATTGTCCTATTACTTCCCTTTTCATATTCTGATTCTTTTCTGAGATTCTTCTTCTGGGAATTGAACGATTTTGCGCTCTTTCTGATGCTTGATTTTGGGATTTTATTGTTTTCGATTCTTCGATGAATTTGGCTTGATCCTACTTTGATGAAAGTGGTTAATCGTGTTGGGTTTGTTGTGTGTGGAATGTGAGATGAGAATTTGTGGATTTGAATCGGATTTGTTGTCGAGCGAATTGATTGTTGGCATTTTGGTATTTGTGATTCACTGATGGGATTTTAAGCTTAGAACTGATGATTGGTTTTGTTCTTAGTGTAATTTACGTTTTTATTGCGCTTTTCGTTTTAGGACAACTGGTTTGGAGGTTCTTAAGCATGCAATTGTTGGTATTGAAGAGATGAGATTGATTAGTTTCTTGTTTTGTTGTAGTACTTGATTTGATTGCTAAAGCTTTTAATTGGGGCTGCTAATTTAGGGAGGTTAATTGTTTGCATCTCATACACCCCTGCTATTAGATGCTAATTCGGCTGAACCCCTTGTGTTATCGTGTTTCGAAAGCCGATATGATACTATTGTGCCTCATGTAATCGAGTTTCAAAGGCCAATATGATACTGTTGTGCCTTGTGTAGTCGAGTTTCAAAAGCCAATATGATACTATTGTGGCTCGTGTAGTCGAGTTTCAGAGGCTGATATGATACTATTGTGCCTCGTATTATCAAGTTTCAAAAGCCAATATGATACTGTTGTGCCTCATGCAATCGAGTTTCATAAGCCAATATGATACTGTTGTGCCTCATGTAATCGAGTTTCAAAAGCCGATATGATACTATTGTGCCTCGTGTAATCGAGTTTCAAAACCCGATAAGATACTATTGTTCAATGAGATGATGGAAATGTTTGGAGAAATTCTCATGGTAACGGGGAATTTAATGTTAATAATCTTAGCAAGACAGCAAGCACGGTGGTTTACTGTGTTGTAATGTCGATGTGATTAGTTCTATCATTGATCATACCGTTAATCCACGCACTTCAACTTCTTTTCTGCAATCATAGTTCATCAGCTGCTAATATCTAGAGTTATAAGGAACTTATGGCATCCTTTTTAGTCACTTGAAGAATTTTTGTGATTCAGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGGTATTGCTGTAATCTTGAACTTTTTTTTGGGTCTTGCACAATATTTCTGGTTACAGGTGTTATTAAATTCAAGCTAATTCATTGATTTGGATATCATATTTGATGACCACAACTGAGATTATTATTACTGAAAGAAGTTCTTAATGCTCATGCAAATATATGATTTAAGGTAATGTGTCAAGAATTCATTGCATAGTTAGTCATGACTAATGAGAAGTAATCTTCTATATTTAGCATGTCAGAACGGTGAGATCCCACGTCGGTTGGGGAGGAGAACAAAACATTCTTTATAAAGGTGTAGAAACCTCTCTCTATCATACGCTTTTTAAAATCCTGAAGGAAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGCTATTACAATAACAGTAAAGGAAATTGATTTTGTATTATGGATCTCTAAAGGTGATCTCTATTTAAGACTATGCTATTGAGTATCTTCCATCACCTCATTTGTTAGAACATGCGTTAGAACATTCGTTCGTTAGTGATGATTAAATCTGTCAAAAATACTTACTAGTTAGGTGTATTAGTTAGTGAGTTCTTACGTATCTCCGTTTTGAAATGGAGACAGAATCGTGCACAAAATCAAAATACATACCTCTAGATAGATTAGAATATGTTTAGCAGAGTGTACATCGTGAATGGAGTATAACTATCCAATGTATGCCTATCTTCTTTCGTGTATGGATGTCTCTAATGGTAGAACGAAAGTTGGAAAAGCACGACATTACAATATTTTGGCTTTTAAGATGATGAAAGAGATCTTAAATTAGCCGATATTGTCTTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGAGAGAGATTTCCTTACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAATTAATGTGAGATCTCGCAATCCACCCCCTTTGGGGGACGCTAGCACACCGCCAGTTTCTGGCTCTGATACCATTTATAACGACCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCGTTCTTTCTCGAGCTTCCCCTCAAGGATTTAAAAATGCGTATGCTAGAGAGAGGTTTCCTCATGCTTCATTCTCCTCCCCAACCGATGTGGTATCTCACAAATTCAGCAGAATTTTAGGCTTTTAAGTTCAGTTCAGCTTCAAATTTCGTTTCATACATTTTGCATATGAAGCTGCACACCTTCCTATGCAAAATTCATATGCACACATTGATGTTAAGCATGATTCAAGGTTGTGGAGTGTCACATGTTGTACAAAAGAATTCATTAGACCAAAGTTAAGCTCCATCTAATTTGCAAATGGCTGAATACCGGCATGAAAGTAGAGAGAGAAGTTTTAGTTTGATTTGATGAAGAGTTGATATTAAGTAGAAGATGAAAGAAGCAAATCCAGAGTGTGTTTAATAACAATAAAAGTTTTGTGTATTTTGTGGAGAACAGAGATATGGGATGCACTACGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGCGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTATTTACATTGACACCCTCCATCCCTCTACTTCGGTTGATTCCAATTTACAAGAATAAAACTGATGCAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGAAGTAATAAGCAATGAGGAATTGTATGTTTTGCGTGCTACCTAAATTGATTGTAAATCATCATGTATATTACAACCAACACTGTTTCATACCGTCTCTCACATTGATGGATTGGATTGGGCTTATTATTATTATGCTAACTCACTGTAGCTTCCTTTTGATCGAATCAAGTGTCTATTTGGAATTGTC

mRNA sequence

AAAAGGCGCTGTAAACTCAGCTTCGACTTTTGACTTTTTTGGACTCTCAGCGAAGCTTCTTCGCTCTCTTCCCAAATCTCCCATTCCCTCTTCCATCTCTTCTCATCCTTCCTTCTTTCTTTCTTCTTGTAATTTTGCGCTCTTTAATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTACGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGCGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGAAGTAATAAGCAATGAGGAATTGTATGTTTTGCGTGCTACCTAAATTGATTGTAAATCATCATGTATATTACAACCAACACTGTTTCATACCGTCTCTCACATTGATGGATTGGATTGGGCTTATTATTATTATGCTAACTCACTGTAGCTTCCTTTTGATCGAATCAAGTGTCTATTTGGAATTGTC

Coding sequence (CDS)

ATGGGTTGTGCCGGATCGTCGCAGGCCAAAGGCGACGGGCCTGTGAAAAAAATTCGGAAGCCTAAAGCTTGGAAGCATCCCCAGCCAATAACAAAGACAGATCTTGCGCGGATGCGTGATGAATTTTGGGATACTGCTCCTCATTATGGTGGCACAAAAGAGATATGGGATGCACTACGAGCTGCTGCAGAAGCTGATCTGACACTAGCACAAGCAATAGTGGATAGTGCAGGCGTCATTGTACAAAGTGCTGATTTAACAATTTGTTACGATGAAAGAGGTGCAAGATACGAACTGCCCAAGTATGTTTTGAGCGAGCCAACCAACTTGATTTGA

Protein sequence

MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI
Homology
[Close]
BLAST of Carg14738 vs. NCBI nr
Match: XP_022941497.1 (ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022981235.1 ubiquitin domain-containing protein 1-like [Cucurbita maxima] >XP_023525955.1 ubiquitin domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >KAG6607920.1 Ubiquitin domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037447.1 Ubiquitin domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607927.1 Ubiquitin domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.7 bits (587), Expect = 6.1e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. NCBI nr
Match: XP_022144511.1 (ubiquitin domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. NCBI nr
Match: XP_038898666.1 (ubiquitin domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 8.2e-54
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKG+GPVKKIRKPK WKHPQPI+KTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGNGPVKKIRKPKPWKHPQPISKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. NCBI nr
Match: XP_008463752.1 (PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 5.3e-53
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. NCBI nr
Match: XP_004146021.1 (ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN55055.1 hypothetical protein Csa_012079 [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 6.9e-53
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 58/111 (52.25%), Postives = 68/111 (61.26%), Query Frame = 0 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA+
Sbjct: 21  GTGVALGRNQPLKREKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAQ 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y LS P N+I
Sbjct: 81  AFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMI 130

[Close]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-22
Identity = 63/128 (49.22%), Postives = 74/128 (57.81%), Query Frame = 0 

Query: 2   GCAGSSQAKGDG--------------PVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAP 61
           GC G  +A+  G              P+KK  KPK WK   P+T+  L   RDEFWDTAP
Sbjct: 3   GCVGRERAETRGRGSRTQRKRGGRNEPLKK-DKPK-WKSDYPMTEGQLRSKRDEFWDTAP 62

Query: 62  HYGGTKEIWDALRAAAEA----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYV 112
            + G KEIWDAL+AAA A    D  LAQAIVD A + +    LT CYDE G RY+LP Y 
Sbjct: 63  AFEGRKEIWDALKAAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYC 122

[Close]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match: Q5EAE3 (Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match: Q8WUN7 (Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match: Q6PGH0 (Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 5   GSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALRAAAE 64
           G+  A G     K  KPK WK   P+T   L   RDEFWDTAP + G KEIWDAL+AAA 
Sbjct: 21  GTGVALGRNQPLKKEKPK-WKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAH 80

Query: 65  A----DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           A    D  LAQAI+D A + +    LT CYDE G RY+LP Y L+ P N+I
Sbjct: 81  AFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMI 130

[Close]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match: A0A6J1IYX4 (ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480432 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.9e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match: A0A6J1FML0 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446780 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.9e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match: A0A6J1CTM1 (ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014152 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 8.0e-55
Identity = 106/111 (95.50%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKT+L +MRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTELVQMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match: A0A1S3CJZ5 (ubiquitin domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501821 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53
Identity = 104/111 (93.69%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNLI
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLI 111

[Close]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match: A0A0A0KZH7 (UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G626080 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.4e-53
Identity = 103/111 (92.79%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGSSQAKGDG VKKIRKPK WK+PQPITKTDL RMRDEFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSSQAKGDGSVKKIRKPKPWKNPQPITKTDLVRMRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAEADLTLAQAIVDSAG+IVQSADLTICYDERGA+YELPKYVLSEPTNL+
Sbjct: 61  AAAEADLTLAQAIVDSAGIIVQSADLTICYDERGAKYELPKYVLSEPTNLV 111

[Close]
BLAST of Carg14738 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 196.8 bits (499), Expect = 9.0e-51
Identity = 90/110 (81.82%), Postives = 102/110 (92.73%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGCAGS+Q++ DG VKKIRKPK WKH QPITK +L ++R+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNL 111
           AAAEAD++LAQAIVDSAGVIVQ+ DLT+CYDERGA+YELPKYVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]
BLAST of Carg14738 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.2e-44
Identity = 83/113 (73.45%), Postives = 95/113 (84.07%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPV--KKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDA 60
           MGC GSSQA+ +G    KKI KPK W H +PIT+  L  MR+EFWDT+PHYGG +EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LRAAAEADLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           LRAAAEADL LAQ IVDSAGVIVQ+ DLT+C+DERGARYELP+YVLSEPTNLI
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLI 113

[Close]
BLAST of Carg14738 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.0e-41
Identity = 78/112 (69.64%), Postives = 97/112 (86.61%), Query Frame = 0 

Query: 1   MGCAGSSQAKGDGPVKKIRKPKAWKHPQPITKTDLARMRDEFWDTAPHYGGTKEIWDALR 60
           MGC+ SS+   +G  +KIR+PK WKHPQPI++ +L +MR+EFWDTAPHYGG KEIWDALR
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-DLTLAQAIVDSAGVIVQSADLTICYDERGARYELPKYVLSEPTNLI 112
           AAAE  DL+LAQ I++SAGVIVQ+ DLTICYDE+G++YELPKYVL +P+NLI
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

The following BLAST results are available for this feature:
BLAST of Carg14738 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941497.16.1e-57100.00ubiquitin domain-containing protein 1-like [Cucurbita moschata] >XP_022981235.1 ... [more]
XP_022144511.11.7e-5495.50ubiquitin domain-containing protein 1-like [Momordica charantia][more]
XP_038898666.18.2e-5494.59ubiquitin domain-containing protein 1-like [Benincasa hispida][more]
XP_008463752.15.3e-5393.69PREDICTED: ubiquitin domain-containing protein 1-like [Cucumis melo][more]
XP_004146021.16.9e-5392.79ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN55055.1 hypothetical... [more]
BLAST of Carg14738 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DG432.3e-2252.25Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1[more]
Q4V8W75.0e-2249.22Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1[more]
Q5EAE31.1e-2151.35Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1[more]
Q8WUN71.1e-2151.35Ubiquitin domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBTD2 PE=1 SV=2[more]
Q6PGH01.1e-2151.35Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=... [more]
BLAST of Carg14738 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IYX42.9e-57100.00ubiquitin domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1FML02.9e-57100.00ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1CTM18.0e-5595.50ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A1S3CJZ52.6e-5393.69ubiquitin domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1035018... [more]
A0A0A0KZH73.4e-5392.79UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G626080 PE=4 SV... [more]
BLAST of Carg14738 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53400.19.0e-5181.82Ubiquitin domain-containing protein [more]
AT5G45740.12.2e-4473.45Ubiquitin domain-containing protein [more]
AT1G16960.11.0e-4169.64Ubiquitin domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 16..111
e-value: 4.7E-34
score: 116.6
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 31..104
e-value: 1.6E-27
score: 97.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR13609:SF25BINDING PROTEIN, PUTATIVE-RELATEDcoord: 1..110
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14738-RACarg14738-RAmRNA