Carg14411 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg14411
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor IIIA-like
Location	Carg_Chr18: 8855695 .. 8857013 (+)
RNA-Seq Expression	Carg14411
Synteny	Carg14411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAATGCAGAGGCCATATATTTGTACCGTAGATGGCTGTGACGCGAGTTATAGAAGAAAGGATCATTTAACTCGACACCTTCTCCAGCATCAAGGAATGATATTCAAGTGTCCTATCGAAAATTGTAGCCGTGAATTTGCATATCTATCCTGTCTGAATCGACACTTGAAAGTTTTCCATGATGGTGATACTCCTGAAGTTGAATGTCAGAAGCGTTTTGTTTGCCTGGAAGATGGATGTGGAAAGGAATTCAGATATGCCTCTCAACTGCAAAAACATGAAGATTCGCACGGTTGGTCCCGATCTTTTCTATAAGAACTTAATTTTGACTGTTTGACTCGAAGTATTGTGTATTAATTTCAATATTTACTGTACCGTAGCTAAGCTAGACTCGGTAGAGGCATGCTGTTCTGAACTGGGTTGCATGAAAACATTTACGAACAAGCAATGCCTTAAGGCTCATATGCAGTCCTGCCACCAATACATTGAATGTGAGATTTGTGGTGAAAAGAAATTGAGAAAGAACATCAAGCAACATCTCCGACAAAGGCATGAAAGTGACGGTCCGCAAACCACAATTCGATGCACGCACGAGGGCTGCAGTAATGTCTTTTCAACAGTAAGTAGCTCAAACTCTGCAAACATCTCCGAGCTTAGTTGTTCTTTAGATTGGAACGATCTTTGATATGCTACCTCGTTATTGATCTCCCAGAGTTCGAATCTCCGGCAACACGTAAAAGTCGTGCATCTAGGACAAAAACCTTTTGCTTGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTTAGAGACAATCACGAGAAAAGTGGCCAGCATGTCTACACCGATGTAAGTTAGCATTTAGCCATCGTTGCGTATTCGTATACTTTTGACCTTTAGATAGATGATTAACGGAGCGTTTTGCTCTGGAATCAGGGGGATTTTGAAGTAGCTGACGAGCGATTCCGCTCGAAGCCAAGGGGTGGGAGAAAAAGGGTTTGTCCAACTGTTGAAATGCTTATACGGAAGAGGGTTACCCCCCCAACTGAGCTGAATTTCATGATGGATGAGGACTGTTAGTATGTCCCTACTAGAAAAGTAGCCAAGCCAACCCAGCCAGACCCCTTGTTGATACTAATCCTACGCTCATTAGAAGTATTTTGATAGCTTATGACTGATAGAATCTGTATGTATAATCCCGCGTTCATATTAGAAGTATTTTGATAGCTTATGAATGATAGAATCATCTGTAAGTAATGTAATATATACTACACTTTCCCAGAATTAGAACAGTCATAGTATGTATTTT

mRNA sequence

ATGTTAATGCAGAGGCCATATATTTGTACCGTAGATGGCTGTGACGCGAGTTATAGAAGAAAGGATCATTTAACTCGACACCTTCTCCAGCATCAAGGAATGATATTCAAGTGTCCTATCGAAAATTGTAGCCGTGAATTTGCATATCTATCCTGTCTGAATCGACACTTGAAAGTTTTCCATGATGGTGATACTCCTGAAGTTGAATGTCAGAAGCGTTTTGTTTGCCTGGAAGATGGATGTGGAAAGGAATTCAGATATGCCTCTCAACTGCAAAAACATGAAGATTCGCACGCTAAGCTAGACTCGGTAGAGGCATGCTGTTCTGAACTGGGTTGCATGAAAACATTTACGAACAAGCAATGCCTTAAGGCTCATATGCAGTCCTGCCACCAATACATTGAATGTGAGATTTGTGGTGAAAAGAAATTGAGAAAGAACATCAAGCAACATCTCCGACAAAGGCATGAAAGTGACGGTCCGCAAACCACAATTCGATGCACGCACGAGGGCTGCAGTAATGTCTTTTCAACAAGTTCGAATCTCCGGCAACACGTAAAAGTCGTGCATCTAGGACAAAAACCTTTTGCTTGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTTAGAGACAATCACGAGAAAAGTGGCCAGCATGTCTACACCGATGGGGATTTTGAAGTAGCTGACGAGCGATTCCGCTCGAAGCCAAGGGGTGGGAGAAAAAGGGTTTGTCCAACTGTTGAAATGCTTATACGGAAGAGGGTTACCCCCCCAACTGAGCTGAATTTCATGATGGATGAGGACTGTTAGTATGTCCCTACTAGAAAAGTAGCCAAGCCAACCCAGCCAGACCCCTTGTTGATACTAATCCTACGCTCATTAGAAGTATTTTGATAGCTTATGACTGATAGAATCTGTATGTATAATCCCGCGTTCATATTAGAAGTATTTTGATAGCTTATGAATGATAGAATCATCTGTAAGTAATAATTAGAACAGTCATAGTATGTATTTT

Coding sequence (CDS)

ATGTTAATGCAGAGGCCATATATTTGTACCGTAGATGGCTGTGACGCGAGTTATAGAAGAAAGGATCATTTAACTCGACACCTTCTCCAGCATCAAGGAATGATATTCAAGTGTCCTATCGAAAATTGTAGCCGTGAATTTGCATATCTATCCTGTCTGAATCGACACTTGAAAGTTTTCCATGATGGTGATACTCCTGAAGTTGAATGTCAGAAGCGTTTTGTTTGCCTGGAAGATGGATGTGGAAAGGAATTCAGATATGCCTCTCAACTGCAAAAACATGAAGATTCGCACGCTAAGCTAGACTCGGTAGAGGCATGCTGTTCTGAACTGGGTTGCATGAAAACATTTACGAACAAGCAATGCCTTAAGGCTCATATGCAGTCCTGCCACCAATACATTGAATGTGAGATTTGTGGTGAAAAGAAATTGAGAAAGAACATCAAGCAACATCTCCGACAAAGGCATGAAAGTGACGGTCCGCAAACCACAATTCGATGCACGCACGAGGGCTGCAGTAATGTCTTTTCAACAAGTTCGAATCTCCGGCAACACGTAAAAGTCGTGCATCTAGGACAAAAACCTTTTGCTTGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTTAGAGACAATCACGAGAAAAGTGGCCAGCATGTCTACACCGATGGGGATTTTGAAGTAGCTGACGAGCGATTCCGCTCGAAGCCAAGGGGTGGGAGAAAAAGGGTTTGTCCAACTGTTGAAATGCTTATACGGAAGAGGGTTACCCCCCCAACTGAGCTGAATTTCATGATGGATGAGGACTGTTAG

Protein sequence

MLMQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHDGDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRKRVCPTVEMLIRKRVTPPTELNFMMDEDC

Homology

[Close]

BLAST of Carg14411 vs. NCBI nr
Match: KAG7012872.1 (Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 596.7 bits (1537), Expect = 1.0e-166
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MLMQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVF 60
           MLMQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVF
Sbjct: 1   MLMQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVF 60

Query: 61  HDGDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNK 120
           HDGDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNK
Sbjct: 61  HDGDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNK 120

Query: 121 QCLKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSS 180
           QCLKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSS
Sbjct: 121 QCLKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSS 180

Query: 181 NLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKP 240
           NLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKP
Sbjct: 181 NLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKP 240

Query: 241 RGGRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           RGGRKRVCPTVEMLIRKRVTPPTELNFMMDEDC
Sbjct: 241 RGGRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 273

[Close]

BLAST of Carg14411 vs. NCBI nr
Match: XP_022945877.1 (transcription factor IIIA-like [Cucurbita moschata])

HSP 1 Score: 582.4 bits (1500), Expect = 2.0e-162
Identity = 265/271 (97.79%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH+
Sbjct: 44  LERPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           GDTPEVECQKRFVC ED CGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC
Sbjct: 104 GDTPEVECQKRFVCPEDECGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQ+HESDGPQTTIRCTHEGCSNVFSTSSNL
Sbjct: 164 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGPQTTIRCTHEGCSNVFSTSSNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG
Sbjct: 224 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC
Sbjct: 284 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 314

[Close]

BLAST of Carg14411 vs. NCBI nr
Match: XP_023542929.1 (transcription factor IIIA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.9 bits (1483), Expect = 1.9e-160
Identity = 259/271 (95.57%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPYICTVDGC+ SYRRKDHLTRHLLQHQGMIFKCP+ENCSREFAYLSCLNRHLKVFH+
Sbjct: 44  LERPYICTVDGCEVSYRRKDHLTRHLLQHQGMIFKCPMENCSREFAYLSCLNRHLKVFHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           GDTPEVECQKRFVC EDGCGKEFRYASQLQKHEDSHAKLDS+EACCSELGCMKTFTNKQC
Sbjct: 104 GDTPEVECQKRFVCPEDGCGKEFRYASQLQKHEDSHAKLDSIEACCSELGCMKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQ+HESDGPQTTIRCT+EGCSNVFSTSSNL
Sbjct: 164 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGPQTTIRCTYEGCSNVFSTSSNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           RQHVKVVHLG+KPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG
Sbjct: 224 RQHVKVVHLGRKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           GRKRVCPTVEMLIRKRVTPPTELNFMMD+DC
Sbjct: 284 GRKRVCPTVEMLIRKRVTPPTELNFMMDDDC 314

[Close]

BLAST of Carg14411 vs. NCBI nr
Match: XP_022966871.1 (transcription factor IIIA-like [Cucurbita maxima])

HSP 1 Score: 572.0 bits (1473), Expect = 2.7e-159
Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPYICTVDGC+ASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH+
Sbjct: 44  LERPYICTVDGCEASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           G TPEVE QKRFVC EDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC
Sbjct: 104 GSTPEVEGQKRFVCSEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           LKAH+QSCHQYIECEICGEKKLRKNIKQHLRQ+HESDG QTTIRCTHEGCSNVFSTSSNL
Sbjct: 164 LKAHVQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGLQTTIRCTHEGCSNVFSTSSNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG
Sbjct: 224 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC
Sbjct: 284 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 314

[Close]

BLAST of Carg14411 vs. NCBI nr
Match: XP_038891321.1 (transcription factor IIIA-like [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136
Identity = 218/268 (81.34%), Postives = 247/268 (92.16%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPY+C+VDGC+ASYRRKDHLTRHLL HQG+IFKCPIE+C REF+Y+SC+NRHLK  H+
Sbjct: 43  LERPYVCSVDGCEASYRRKDHLTRHLLHHQGIIFKCPIESCCREFSYISCVNRHLKECHE 102

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
            +    ECQK+FVC EDGCGK FRYASQLQKHEDSH KLDS+EA C+E GCMKTFTNKQC
Sbjct: 103 DEASSEECQKQFVCPEDGCGKVFRYASQLQKHEDSHVKLDSIEAYCTEPGCMKTFTNKQC 162

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           L+AHMQSCHQY++CEICGEKKLRKN+KQHLRQ+HES+GP   I CT EGCS VFST+SNL
Sbjct: 163 LRAHMQSCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTFEGCSKVFSTASNL 222

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           +QH+KVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYT+GDFE ADE+FRSKPRG
Sbjct: 223 QQHMKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTNGDFEEADEQFRSKPRG 282

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMD 271
           GRKR+CPTVEMLIRKRVTPP+EL+FMMD
Sbjct: 283 GRKRICPTVEMLIRKRVTPPSELDFMMD 310

[Close]

BLAST of Carg14411 vs. ExPASy Swiss-Prot
Match: Q84MZ4 (Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 7.6e-88
Identity = 161/314 (51.27%), Postives = 194/314 (61.78%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH- 62
           ++R + C VD C ASYRRKDHL RHLL H+G +FKCP ENC  EF+    + RH+K +H 
Sbjct: 90  LERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHS 149

Query: 63  --------------------------------------------------DGDTPEVEC- 122
                                                             +GD+   EC 
Sbjct: 150 NDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECS 209

Query: 123 --QKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAHMQ 182
             QK+ VC E GCGK F+Y SQLQKH+DSH KLDSVEA CSE GCMK FTN++CLK+H++
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR 269

Query: 183 SCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNLRQHVKV 242
           SCHQ+I CEICG K L+KNIK+HLR  H+ D     I+C  EGCS+ FS +SNL++H+K 
Sbjct: 270 SCHQHINCEICGSKHLKKNIKRHLR-THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKA 329

Query: 243 VHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRKRVC 263
           VH   +PF C FPGCGMRF YKHVR+ HE SG HVYT GDF   DE F S+PRGG KR  
Sbjct: 330 VHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQ 389

[Close]

BLAST of Carg14411 vs. ExPASy Swiss-Prot
Match: Q8VHT7 (Transcription factor IIIA OS=Mus musculus OX=10090 GN=Gtf3a PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.5e-24
Identity = 78/273 (28.57%), Postives = 120/273 (43.96%), Query Frame = 0


Query: 4   QRPYICTVDGCDASYRRKDHLTRHLLQHQG-MIFKCPIENCSREFAYLSCLNRHLKVFHD 63
           +RP++C  +GC  ++ R  HL+RH+L H G   F C  + C+++F   S L +H++  H 
Sbjct: 65  ERPFVCDYEGCGKAFIRDYHLSRHVLIHTGEKPFVCADDGCNQKFNTKSNLKKHIERKHG 124

Query: 64  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 123
                   QK++VC  +GC K F+   QL+ H+  H         C+  GC K F +   
Sbjct: 125 NP------QKQYVCSYEGCKKAFKKHQQLRTHQCQHTSEPLFR--CTHEGCGKHFASPSR 184

Query: 124 LK--------------------------AHMQSCH-QYIECEICGEK-KLRKNIKQHLRQ 183
           LK                           HM+  H + I C +C    K R  +KQH++ 
Sbjct: 185 LKRHGKVHEGYLCQKGCSFMGKTWTELLKHMREAHKEDITCNVCQRMFKRRDYLKQHMK- 244

Query: 184 RHESDGPQTTI-RCTHEGCSNVFSTSSNLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVR 243
              +  P+  + RC  +GC   ++T  NL+ H+   H  ++PF C   GCG  F  K   
Sbjct: 245 ---THAPERDVYRCPRQGCGRTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMKQSL 304

Query: 244 DNHEKSGQHVYTDGDFEVADERFRSKPRGGRKR 247
             H      V  D D     +R + K R  R+R
Sbjct: 305 MRHS-----VVHDPD----KKRMKLKVRAPRER 316

[Close]

BLAST of Carg14411 vs. ExPASy Swiss-Prot
Match: P34695 (Transcription factor IIIA OS=Lithobates pipiens OX=8404 GN=gtf3a PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23
Identity = 70/241 (29.05%), Postives = 109/241 (45.23%), Query Frame = 0


Query: 4   QRPYICTVDGCDASYRRKDHLTRHLLQHQG-MIFKCPIENCSREFAYLSCLNRHLKVFHD 63
           +RP+ CTV+GC   +    HLTRH + H G    KC   +C   F  ++ L +H +  H 
Sbjct: 40  ERPFPCTVEGCGKGFVTLFHLTRHSMTHTGEKPCKCDAPDCDLSFTTMTNLRKHYQRAHL 99

Query: 64  GDTPEVEC------------------------QKRFVCLEDGCGKEFRYASQLQKHEDSH 123
             +   EC                        Q+ F C  +GC K F   S+L++HE  H
Sbjct: 100 SPSLIYECYFADCGQTFKKHNQLKLHQYIHTNQQPFKCNHEGCDKSFSSPSRLKRHEKVH 159

Query: 124 AKLD-SVEACCSELGCMKTFTNKQCLKAHMQSCH-QYIECEICGEK-KLRKNIKQHLRQR 183
           A      ++ CS +G  KT+T       H+ + H +   C++C  K K + ++K H ++ 
Sbjct: 160 AGYPCQKDSSCSFVG--KTWTE---YMKHLAASHSEPTICDVCNRKFKNKTHLKDH-KRT 219

Query: 184 HESDGPQTTIRCTHEGCSNVFSTSSNLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDN 217
           HE +  +   +C  +GC   ++    L+ H+   H   +PFAC  PGCG  F  K   D 
Sbjct: 220 HEVE--RVVYKCPRDGCDRTYTKKFGLQSHILSFHEDSRPFACGHPGCGKTFAMKQSLDR 272

[Close]

BLAST of Carg14411 vs. ExPASy Swiss-Prot
Match: P79797 (Transcription factor IIIA OS=Ictalurus punctatus OX=7998 GN=gtf3a PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 68/220 (30.91%), Postives = 100/220 (45.45%), Query Frame = 0


Query: 4   QRPYICTVDGCDASY----RRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKV 63
           ++PY C  DGC  S+      K+H+ R + QH+   + C  E C++EF     L  H K 
Sbjct: 67  KKPYQCLEDGCSESFISTAGLKNHVER-VHQHKEKHYVCDYEGCAKEFRKKKQLRSH-KC 126

Query: 64  FHDGDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTN 123
            H    P       F C  +GCGK++  + +LQKHE  H      E  C   G M T   
Sbjct: 127 EHMNQLP-------FECQYEGCGKKYTTSKKLQKHEKVHDVYPCAEEGCDFQGRMWTE-- 186

Query: 124 KQCLKAHMQSCH-QYIECEICGEKKLRKN--IKQHLRQRHESDGPQTTIRCTHEGCSNVF 183
               +AH ++ H + ++C+ C  K   K   +K+H    H   G +   +CT EGC   +
Sbjct: 187 ---YQAHRKAAHREALQCDSCA-KVFHKAWFLKKHKLFVHL--GVRRVFKCTKEGCQKTY 246

Query: 184 STSSNLRQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNH 217
           +T  NL+ H+   H G + F C   GCG  F  +     H
Sbjct: 247 TTHFNLQNHILSFHEGIRSFICPHDGCGKAFAMEGSLKRH 269

[Close]

BLAST of Carg14411 vs. ExPASy Swiss-Prot
Match: Q8VHT8 (Transcription factor IIIA OS=Rattus norvegicus OX=10116 GN=Gtf3a PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18
Identity = 66/215 (30.70%), Postives = 95/215 (44.19%), Query Frame = 0


Query: 7   YICTVDGCDASYRRKDHLTRHLLQHQG-MIFKCPIENCSREFAYLSCLNRHLKVFHDGDT 66
           +IC+   C ASY +   L  HL +H G   F C  E C + F     L+RH+ + H G+ 
Sbjct: 38  FICSFPDCSASYNKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHI-LIHTGEK 97

Query: 67  PEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKA 126
           P       FVC ++GC ++F   S L+KH +   +    +  C+  GC K F   Q L+ 
Sbjct: 98  P-------FVCADNGCNQKFSTKSNLKKHIERKHENPQKQYVCNFEGCKKAFKKHQQLRT 157

Query: 127 HMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNLRQH 186
           H        +C             QH          +   RCTHEGC   F++ S L++H
Sbjct: 158 H--------QC-------------QHTN--------EPLFRCTHEGCGKHFASPSRLKRH 213

Query: 187 VKV--VHLGQKPFACCFPGCGMRFGYKHVRDNHEK 219
            KV   +L QK   C F G       KH R+ H++
Sbjct: 218 GKVHEGYLCQK--GCSFVGKTWTELLKHTREAHKE 213

[Close]

BLAST of Carg14411 vs. ExPASy TrEMBL
Match: A0A6J1G248 (transcription factor IIIA-like OS=Cucurbita moschata OX=3662 GN=LOC111449986 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 9.8e-163
Identity = 265/271 (97.79%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH+
Sbjct: 44  LERPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           GDTPEVECQKRFVC ED CGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC
Sbjct: 104 GDTPEVECQKRFVCPEDECGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQ+HESDGPQTTIRCTHEGCSNVFSTSSNL
Sbjct: 164 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGPQTTIRCTHEGCSNVFSTSSNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG
Sbjct: 224 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC
Sbjct: 284 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 314

[Close]

BLAST of Carg14411 vs. ExPASy TrEMBL
Match: A0A6J1HQH9 (transcription factor IIIA-like OS=Cucurbita maxima OX=3661 GN=LOC111466445 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.3e-159
Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++RPYICTVDGC+ASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH+
Sbjct: 44  LERPYICTVDGCEASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           G TPEVE QKRFVC EDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC
Sbjct: 104 GSTPEVEGQKRFVCSEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           LKAH+QSCHQYIECEICGEKKLRKNIKQHLRQ+HESDG QTTIRCTHEGCSNVFSTSSNL
Sbjct: 164 LKAHVQSCHQYIECEICGEKKLRKNIKQHLRQKHESDGLQTTIRCTHEGCSNVFSTSSNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG
Sbjct: 224 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 274
           GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC
Sbjct: 284 GRKRVCPTVEMLIRKRVTPPTELNFMMDEDC 314

[Close]

BLAST of Carg14411 vs. ExPASy TrEMBL
Match: A0A5A7SY16 (Transcription factor IIIA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G007900 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.1e-135
Identity = 212/268 (79.10%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++R Y+C++DGC+ASYRRKDHLTRHLL HQG +FKCPIE+C REFAYLSC+ RHLK  H+
Sbjct: 138 LERSYVCSIDGCNASYRRKDHLTRHLLHHQGTMFKCPIESCCREFAYLSCVTRHLKECHE 197

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           G+ P  ECQK+FVC EDGCGK FRYAS+LQKHE SH KLDS+EACC+E GC+KTFTNKQC
Sbjct: 198 GEAPPEECQKQFVCPEDGCGKVFRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQC 257

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           L+AHMQ+CHQY++CEICGEKKLRKN+KQHLRQ+HES+GP   I CT+EGCS VFST+SNL
Sbjct: 258 LRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNL 317

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           +QH KVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSG HVYT+GDFE ADE+FRSKPRG
Sbjct: 318 QQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRG 377

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMD 271
           GRKR+CPTVEMLIRKRVTPP++L+FMM+
Sbjct: 378 GRKRICPTVEMLIRKRVTPPSDLDFMME 405

[Close]

BLAST of Carg14411 vs. ExPASy TrEMBL
Match: A0A1S3BH74 (transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.1e-135
Identity = 212/268 (79.10%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           ++R Y+C++DGC+ASYRRKDHLTRHLL HQG +FKCPIE+C REFAYLSC+ RHLK  H+
Sbjct: 44  LERSYVCSIDGCNASYRRKDHLTRHLLHHQGTMFKCPIESCCREFAYLSCVTRHLKECHE 103

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           G+ P  ECQK+FVC EDGCGK FRYAS+LQKHE SH KLDS+EACC+E GC+KTFTNKQC
Sbjct: 104 GEAPPEECQKQFVCPEDGCGKVFRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQC 163

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           L+AHMQ+CHQY++CEICGEKKLRKN+KQHLRQ+HES+GP   I CT+EGCS VFST+SNL
Sbjct: 164 LRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNL 223

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
           +QH KVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSG HVYT+GDFE ADE+FRSKPRG
Sbjct: 224 QQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRG 283

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFMMD 271
           GRKR+CPTVEMLIRKRVTPP++L+FMM+
Sbjct: 284 GRKRICPTVEMLIRKRVTPPSDLDFMME 311

[Close]

BLAST of Carg14411 vs. ExPASy TrEMBL
Match: A0A6J1GYZ5 (transcription factor IIIA isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458776 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 6.6e-135
Identity = 220/272 (80.88%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHD 62
           MQRPYIC++DGC+ASYRRKDHLTRHLL HQG+I KCPIE CSREFAY+SC+NRHLK  H+
Sbjct: 1   MQRPYICSIDGCEASYRRKDHLTRHLLHHQGLIIKCPIEGCSREFAYISCVNRHLKECHE 60

Query: 63  GDTPEVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQC 122
           G  P  ECQK+FVC EDGCGK FRYASQLQKHE SH KLDS+EACC+E GCMKTFTNK+C
Sbjct: 61  GGAPPEECQKQFVCPEDGCGKVFRYASQLQKHEHSHFKLDSIEACCAEPGCMKTFTNKKC 120

Query: 123 LKAHMQSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNL 182
           L+AHMQS HQYI CEICGEKKLRKN+KQHLRQ+HES+GP   I CTHEGCS VFST SNL
Sbjct: 121 LQAHMQSFHQYINCEICGEKKLRKNMKQHLRQKHESEGPPEAIPCTHEGCSKVFSTISNL 180

Query: 183 RQHVKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRG 242
            QH+KVVHLGQKPFAC FPGCGMRFGYKHVRDNHEK GQHVYT+GDFE ADE+FRSKPRG
Sbjct: 181 HQHMKVVHLGQKPFACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRG 240

Query: 243 GRKRVCPTVEMLIRKRVTPPTELNFM-MDEDC 274
           GRKR+ PTVEMLIRKR+TPP+EL+F+ MDE+C
Sbjct: 241 GRKRIRPTVEMLIRKRITPPSELDFITMDEEC 272

[Close]

BLAST of Carg14411 vs. TAIR 10
Match: AT1G72050.1 (transcription factor IIIA )

HSP 1 Score: 325.5 bits (833), Expect = 4.1e-89
Identity = 161/315 (51.11%), Postives = 194/315 (61.59%), Query Frame = 0


Query: 2   LMQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH 61
           + +R + C VD C ASYRRKDHL RHLL H+G +FKCP ENC  EF+    + RH+K +H
Sbjct: 1   MFERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYH 60

Query: 62  ---------------------------------------------------DGDTPEVEC 121
                                                              +GD+   EC
Sbjct: 61  SNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAEC 120

Query: 122 ---QKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAHM 181
              QK+ VC E GCGK F+Y SQLQKH+DSH KLDSVEA CSE GCMK FTN++CLK+H+
Sbjct: 121 STGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHI 180

Query: 182 QSCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNLRQHVK 241
           +SCHQ+I CEICG K L+KNIK+HLR  H+ D     I+C  EGCS+ FS +SNL++H+K
Sbjct: 181 RSCHQHINCEICGSKHLKKNIKRHLR-THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMK 240

Query: 242 VVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRKRV 263
            VH   +PF C FPGCGMRF YKHVR+ HE SG HVYT GDF   DE F S+PRGG KR 
Sbjct: 241 AVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRK 300

[Close]

BLAST of Carg14411 vs. TAIR 10
Match: AT1G72050.2 (transcription factor IIIA )

HSP 1 Score: 325.1 bits (832), Expect = 5.4e-89
Identity = 161/314 (51.27%), Postives = 194/314 (61.78%), Query Frame = 0


Query: 3   MQRPYICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFH- 62
           ++R + C VD C ASYRRKDHL RHLL H+G +FKCP ENC  EF+    + RH+K +H 
Sbjct: 90  LERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHS 149

Query: 63  --------------------------------------------------DGDTPEVEC- 122
                                                             +GD+   EC 
Sbjct: 150 NDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAECS 209

Query: 123 --QKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAHMQ 182
             QK+ VC E GCGK F+Y SQLQKH+DSH KLDSVEA CSE GCMK FTN++CLK+H++
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIR 269

Query: 183 SCHQYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSSNLRQHVKV 242
           SCHQ+I CEICG K L+KNIK+HLR  H+ D     I+C  EGCS+ FS +SNL++H+K 
Sbjct: 270 SCHQHINCEICGSKHLKKNIKRHLR-THDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKA 329

Query: 243 VHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTDGDFEVADERFRSKPRGGRKRVC 263
           VH   +PF C FPGCGMRF YKHVR+ HE SG HVYT GDF   DE F S+PRGG KR  
Sbjct: 330 VHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRKQ 389

[Close]

BLAST of Carg14411 vs. TAIR 10
Match: AT4G06634.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-12
Identity = 50/192 (26.04%), Postives = 82/192 (42.71%), Query Frame = 0


Query: 7   YICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHDGDTP 66
           ++C+ DGC  ++     L +H   H    + C  E C ++F   S L RH  + H G   
Sbjct: 79  FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHY-LIHTG--- 138

Query: 67  EVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAH 126
               ++ ++C  +GCGK F     L+ H  +H++ +     C   GC+K + ++  LK H
Sbjct: 139 ----ERNYICTYEGCGKAFSLDFNLRSHMKTHSQEN--YHICPYSGCVKRYAHEYKLKNH 198

Query: 127 MQSCH------QYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSS 186
           + + H      +  +     EK LR            SD P     C +EGC   +    
Sbjct: 199 VAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYA---CPYEGCEKAYIHEY 257

Query: 187 NLRQHVKVVHLG 193
            L+ H+K  H G
Sbjct: 259 KLKLHLKREHPG 257

[Close]

BLAST of Carg14411 vs. TAIR 10
Match: AT4G06634.2 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-12
Identity = 50/192 (26.04%), Postives = 82/192 (42.71%), Query Frame = 0


Query: 7   YICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHDGDTP 66
           ++C+ DGC  ++     L +H   H    + C  E C ++F   S L RH  + H G   
Sbjct: 41  FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHY-LIHTG--- 100

Query: 67  EVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVEACCSELGCMKTFTNKQCLKAH 126
               ++ ++C  +GCGK F     L+ H  +H++ +     C   GC+K + ++  LK H
Sbjct: 101 ----ERNYICTYEGCGKAFSLDFNLRSHMKTHSQEN--YHICPYSGCVKRYAHEYKLKNH 160

Query: 127 MQSCH------QYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFSTSS 186
           + + H      +  +     EK LR            SD P     C +EGC   +    
Sbjct: 161 VAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYA---CPYEGCEKAYIHEY 219

Query: 187 NLRQHVKVVHLG 193
            L+ H+K  H G
Sbjct: 221 KLKLHLKREHPG 219

[Close]

BLAST of Carg14411 vs. TAIR 10
Match: AT4G06634.3 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-12
Identity = 53/194 (27.32%), Postives = 82/194 (42.27%), Query Frame = 0


Query: 7   YICTVDGCDASYRRKDHLTRHLLQHQGMIFKCPIENCSREFAYLSCLNRHLKVFHDGDTP 66
           ++C+ DGC  ++     L +H   H    + C  E C ++F   S L RH  + H G   
Sbjct: 68  FLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHY-LIHTG--- 127

Query: 67  EVECQKRFVCLEDGCGKEFRYASQLQKHEDSHAKLDSVE--ACCSELGCMKTFTNKQCLK 126
               ++ ++C  +GCGK +  A  L  +  SH K  S E    C   GC+K + ++  LK
Sbjct: 128 ----ERNYICTYEGCGKLWMQAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLK 187

Query: 127 AHMQSCH------QYIECEICGEKKLRKNIKQHLRQRHESDGPQTTIRCTHEGCSNVFST 186
            H+ + H      +  +     EK LR            SD P     C +EGC   +  
Sbjct: 188 NHVAAYHEKNGGGETPKYTPPAEKVLRTVKTPATVCGPSSDRPYA---CPYEGCEKAYIH 247

Query: 187 SSNLRQHVKVVHLG 193
              L+ H+K  H G
Sbjct: 248 EYKLKLHLKREHPG 250

The following BLAST results are available for this feature:

BLAST of Carg14411 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012872.1	1.0e-166	100.00	Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945877.1	2.0e-162	97.79	transcription factor IIIA-like [Cucurbita moschata]	[more]
XP_023542929.1	1.9e-160	95.57	transcription factor IIIA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022966871.1	2.7e-159	96.31	transcription factor IIIA-like [Cucurbita maxima]	[more]
XP_038891321.1	1.5e-136	81.34	transcription factor IIIA-like [Benincasa hispida]	[more]

BLAST of Carg14411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84MZ4	7.6e-88	51.27	Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1	[more]
Q8VHT7	3.5e-24	28.57	Transcription factor IIIA OS=Mus musculus OX=10090 GN=Gtf3a PE=2 SV=2	[more]
P34695	1.0e-23	29.05	Transcription factor IIIA OS=Lithobates pipiens OX=8404 GN=gtf3a PE=2 SV=1	[more]
P79797	3.1e-20	30.91	Transcription factor IIIA OS=Ictalurus punctatus OX=7998 GN=gtf3a PE=2 SV=1	[more]
Q8VHT8	1.7e-18	30.70	Transcription factor IIIA OS=Rattus norvegicus OX=10116 GN=Gtf3a PE=2 SV=2	[more]

BLAST of Carg14411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G248	9.8e-163	97.79	transcription factor IIIA-like OS=Cucurbita moschata OX=3662 GN=LOC111449986 PE=...	[more]
A0A6J1HQH9	1.3e-159	96.31	transcription factor IIIA-like OS=Cucurbita maxima OX=3661 GN=LOC111466445 PE=4 ...	[more]
A0A5A7SY16	5.1e-135	79.10	Transcription factor IIIA OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BH74	5.1e-135	79.10	transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1	[more]
A0A6J1GYZ5	6.6e-135	80.88	transcription factor IIIA isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114587...	[more]

BLAST of Carg14411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72050.1	4.1e-89	51.11	transcription factor IIIA	[more]
AT1G72050.2	5.4e-89	51.27	transcription factor IIIA	[more]
AT4G06634.1	2.4e-12	26.04	zinc finger (C2H2 type) family protein	[more]
AT4G06634.2	2.4e-12	26.04	zinc finger (C2H2 type) family protein	[more]
AT4G06634.3	2.4e-12	27.32	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 134..156 e-value: 12.0 score: 12.5 coord: 7..31 e-value: 8.4E-4 score: 28.6 coord: 74..98 e-value: 0.0063 score: 25.7 coord: 106..131 e-value: 1.4 score: 17.9 coord: 196..222 e-value: 12.0 score: 12.6 coord: 165..190 e-value: 0.0029 score: 26.9 coord: 36..61 e-value: 0.024 score: 23.8
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 7..31 e-value: 0.0011 score: 19.3 coord: 36..61 e-value: 0.0067 score: 16.8 coord: 166..190 e-value: 0.0044 score: 17.4 coord: 74..98 e-value: 0.0039 score: 17.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..61
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 167..190
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 108..131
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 76..98
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 9..31
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 198..222
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 165..195 score: 13.214211
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 7..33 score: 9.286205
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..66 score: 12.777765
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 74..103 score: 10.782589
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 161..239 e-value: 4.2E-10 score: 41.7
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 3..33 e-value: 2.9E-9 score: 38.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 71..134 e-value: 2.0E-7 score: 32.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 35..70 e-value: 5.7E-6 score: 27.9
None	No IPR available	PANTHER	PTHR46179:SF15	SUBFAMILY NOT NAMED	coord: 4..267
None	No IPR available	PANTHER	PTHR46179	ZINC FINGER PROTEIN	coord: 4..267
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 71..99
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 175..218
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 4..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14411-RA	Carg14411-RA	mRNA