Carg13937 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13937
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr08: 4357529 .. 4361799 (-)
RNA-Seq Expression	Carg13937
Synteny	Carg13937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGTCGAAATTTGATGAATAATATTAACCAACCACTGCGACGGTGGTGGATTGCTCGAAGAAAAATTCCCTCCACTGCGCTACCCGTTTTCCCAAATTCTGCAGTTCTCCTCCGAATTGGCCTGCGTTATCTCCCGCCATTTGCCGGCAAATCGCCGCCGCACTGACTCGGCGGTTGTGCTGGTCGCCATCTACAACGCATTCAAGGAGGGAACTGTTTTCACCGCCACAGAGACGCGGAATTCACTGATGTCCTCATCGGAGCAAGCCCTCGTCTCTTTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGGGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCTGTGATTATTCAGCGTACGCAAATGGTAAAATCTCCTATGGTATTTTTGCTAGGCACTGCGTGACTGTGTTAAGATGTTGTTTTTGGGGCTGCAGTTCTTCTGGGGAGGATAAGTGAAAACTGAGCTATGCAGTTTAGAGGATTGCCCGATTAAATTCAATATTATTCCGTTTGTTAGAATCATACGAATGCAGAGTTTTGTGTTAGTATTTGAGTTACTTGATAGCACTACTAAAAGTTGCCATTGAAGTCTAACCGATTAATCAATAACTCGTGAACTCGTGCATTGTTAAATTCTTTTCACATTATGAGGTCTCTAGTAACGTCCTTAAGTTCAGGAGCAATAATGATATGATTCTAGTCTGGATGAACAATGAAATGAGAAGAATCATGGGTGAAATTATATGATTCTAGTCTGCATAGGTCTTCTGGCTTGCCTGAATTTGTTCCATCATCATATATAATATATAACTACGATATGCGGATTAAACATTTGGGAAACCTTGAACTCTTAAATCAATTGTAAAATCTTGGGGAAAACGAATTTCTATTTTCTCAGACGAACTATCATAACCTAATTGGTTCTGCAAGTGTCTGTTTTTGTTCCCCTTTGCTATTCAGTATTGTGAATGTGTTGTGTGTGTACATAATATCCAGTTTTATAAACTAAAGCTTATTGGGTTGTAACTTGTGGCGTTGTTTAGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCGTTCAGAACGGTAAAATCAAGCTTCTCTCTGTTATTGCTATGGTTGGTTCACTCTTTTTGTCCTTAGTAATAAAAGATCTTTGTATTCAATACCTTTTAAGCTTGAATAATATGGAACTTTGTTATTCTGTCTGTGAATAAAGAGCAAATTGAAGTTGAATGATTTTTTTCTGAGGGCATCTCTTATATGTGGCCCTTCTGTTAGGTCCTTTTCCTGTGATTGTCTATTGGATCTTCTTTTTCCCTTGCTTGTGGCGCGTGCAAGTAGGTTTGTAAGTGCTATCTCTTCAGAAAGGGGTCCAAACCGAGTAGGCTTGAAGGTATACCCCATAGTGTCAAGAAATAAGGAATTTATTGTAGCTAACTTTTTGTTTATAAAAACTAAATGTACTTCATATGAGATTGATGTGTGGCAGTTGTGATTTGTGAAGACTGAAGGTAAAATATATATTTTAGATATCTGGTTGAGCAGCAGGGAGCTATATTCCTGTGGTGATTGTACCAGAATTGAGTGCAATTTACATATTACGTCTTATCTTATGTGATGCTGATATTTGTGAAAAAATTTTACAGGTTCCTTTTGTCCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCATTTGCGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCATGAGTACCCTGTGAGTTAGGCAATCTATATTGAATTAAAACATCTTTTTCTTTCTTTTTATTAATGGATTTTATCTAAAAATTCTTTATCATGTTCTACTTTGAAGGTTGGGGTGCTTGATGAGGAGAAAATACTTTCATTAGGGAAAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCAAGCAAGGATTTTCCCCACTTCCTGTAAGTTTATGCATTTTGAAGTAGAAATAACGTTGAGAAGGTCAAGATTATGTAATGTAATTTATGAAGAAGGTAAACCATTGATGCATATAATTAATTCTTTCCCTTGACTCATCCACATAAAATTTGACAATAAATGTGTTCTGTCTGTCAATAGTGAGCCCCATTAATTCGGCTTTAGTGCTCTGTTTGGGATTTTAACTAGGTCCTAGGATCAAGTCAATGAGTAGAAAGCTTTCGTTGTCTGTTGGAGTGATGCTAGCAAATGCTAGTCTCTCCCACATCCACTCGAAGTAACCCTCGCATGAGTGACTATGGGGAACAGTGTCTAATTGGACAAAAATTATTCGTGTTTGTCCTTTGAGATAATCTTCGTTGAAAAAACGGGTACTATGATGACTTACTTTTCCTTGCAGATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTCGGTTCGTTGTCAGTTGGCGTTCTTGGCTGTTCTGTTATGAGGTATGTTATCTTTCTTTCTTTCTGATACGTGGAAATCACTACAAGTGGAGTAAGATTCGGATTACCTTGTTGATCAAATATCTCAAGGCAAGAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCTAGTTTGAATGATTCTTGTTGATCAAATATCTCAACGCAAGAACCACTTGTTTGGGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAACCTAACTACATAGAATTGCAAAGAAACTTAGCCATTGGCTAAAGAAAGCACTACATTTTTCAAGTCTACTTACAAATACAATATACATGGCTTTATATAGCCTCATAATGAAACTATTAAAGGCATTCCAAGAGTTGTAACATTCATACTTCATTATGTATATTGTAACCTAGAGTAAATAAAAAGTCCTAAAATATATTAATGAAATACAATAACTCTAAATTATTCTAAATTGTAATTTACCCAAAATTTATAACATGAAATTTCATTTTTCTTGAATGCAGCAATATTTTCTTCCTATCTTCATTAAAGTATATTGTATGATTGATGTCTCTTGGTTCATATCACTGTCTTTCTTTTATTTTATTGTCAAACTGTAGCAAGGTATCTTAATGTTCGGTAACTTTTTTAGGCAACGCAATGCACTCGTAATATATGCCATCCATGAAATGTTTATTTGCTTGGCACTCTGCTTTCTGCAAATTGGTAGGGTAAGGGATGAAGTAGAAGAGTAGCAATGATTTGTAGCAATGATTCTTCAATCTTTATTTTTCTAGTGGTGAATTTCTCCTGCTTTTATGAACTAACTAATGTTCTTATTTGGTCCTCGAATGGAATGAATAAAAGCTTAGCTCTACTGCGTAGTGAGTGAGTGATGAATGATGAGATTTGATGAATGTTTGAACTTATTAGCGCCCATTCTCTTTCAGAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTGCAGGATTCAGGGAATGATTCCACCATGTCACAACTGGATTCAAGCAATAATATCCCCATCTATGGTGATTTTGGAACTGCATCAGACGACGAAGTAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTTGTCTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCGTGAGAAGAAGCAAATTATTTCTCAGGTTCGAACTCATCTATCTGGGAATCTCATTCATCTGGGTGGCCTTTTTTTTTTTTT

mRNA sequence

CTGGGTCGAAATTTGATGAATAATATTAACCAACCACTGCGACGGTGGTGGATTGCTCGAAGAAAAATTCCCTCCACTGCGCTACCCGTTTTCCCAAATTCTGCAGTTCTCCTCCGAATTGGCCTGCGTTATCTCCCGCCATTTGCCGGCAAATCGCCGCCGCACTGACTCGGCGGTTGTGCTGGTCGCCATCTACAACGCATTCAAGGAGGGAACTGTTTTCACCGCCACAGAGACGCGGAATTCACTGATGTCCTCATCGGAGCAAGCCCTCGTCTCTTTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGGGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCTGTGATTATTCAGCGTACGCAAATGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCGTTCAGAACGGTTCCTTTTGTCCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCATTTGCGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCATGAGTACCCTGTTGGGGTGCTTGATGAGGAGAAAATACTTTCATTAGGGAAAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCAAGCAAGGATTTTCCCCACTTCCTATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTCGGTTCGTTGTCAGTTGGCGTTCTTGGCTGTTCTGTTATGAGAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTGCAGGATTCAGGGAATGATTCCACCATGTCACAACTGGATTCAAGCAATAATATCCCCATCTATGGTGATTTTGGAACTGCATCAGACGACGAAGTAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTTGTCTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCGTGAGAAGAAGCAAATTATTTCTCAGGTTCGAACTCATCTATCTGGGAATCTCATTCATCTGGGTGGCCTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTCCTCATCGGAGCAAGCCCTCGTCTCTTTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGGGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCTGTGATTATTCAGCGTACGCAAATGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCGTTCAGAACGGTTCCTTTTGTCCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCATTTGCGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCATGAGTACCCTGTTGGGGTGCTTGATGAGGAGAAAATACTTTCATTAGGGAAAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCAAGCAAGGATTTTCCCCACTTCCTATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTCGGTTCGTTGTCAGTTGGCGTTCTTGGCTGTTCTGTTATGAGAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTGCAGGATTCAGGGAATGATTCCACCATGTCACAACTGGATTCAAGCAATAATATCCCCATCTATGGTGATTTTGGAACTGCATCAGACGACGAAGTAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTTGTCTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCGTGA

Protein sequence

MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDLRHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPEIKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS

Homology

[Close]

BLAST of Carg13937 vs. NCBI nr
Match: KAG7025892.1 (E3 ubiquitin-protein ligase SPL2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 816.2 bits (2107), Expect = 1.2e-232
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. NCBI nr
Match: KAG6593550.1 (E3 ubiquitin-protein ligase SPL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 812.8 bits (2098), Expect = 1.4e-231
Identity = 405/407 (99.51%), Postives = 405/407 (99.51%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 90  MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 149

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 150 RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 209

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 210 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 269

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE
Sbjct: 270 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 329

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 330 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 389

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 390 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 449

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 450 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 496

[Close]

BLAST of Carg13937 vs. NCBI nr
Match: XP_023000260.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 803.1 bits (2073), Expect = 1.1e-228
Identity = 399/407 (98.03%), Postives = 402/407 (98.77%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHM SDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQP+CATPYTFLQALFGH+YPVGVLDEEKIL LGKNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDST+SQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. NCBI nr
Match: XP_022964220.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 802.4 bits (2071), Expect = 1.9e-228
Identity = 399/407 (98.03%), Postives = 401/407 (98.53%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDF VVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFAVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQP+CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. NCBI nr
Match: XP_023514152.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 799.7 bits (2064), Expect = 1.2e-227
Identity = 398/407 (97.79%), Postives = 401/407 (98.53%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQP+CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDST+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. ExPASy Swiss-Prot
Match: Q9SYH3 (E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.0e-96
Identity = 200/414 (48.31%), Postives = 268/414 (64.73%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSS E+AL++LL+  ALSFDGA LG  LA +A  + LK  ++ +AL +++ AP V +SDL
Sbjct: 1   MSSPERALLNLLTDIALSFDGAILGLTLAVSAVGSALKYASTNAALKKIKDAPEVSISDL 60

Query: 61  RHMI------SDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVI 120
           R ++      S+ +  +  +DQ++VVVRG V+ +  + G+      NVLIS E+GD+A+I
Sbjct: 61  RSLLPASEDKSETNDNRKSNDQRIVVVRGVVKPK--ISGDEGYKNNNVLISPETGDKALI 120

Query: 121 IQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVN 180
           IQRTQ  +++ WK     T   R +  R+ RK  +   RTVPFV+V +     S FV VN
Sbjct: 121 IQRTQTYVYSGWKRLFQSTGH-RFMLERSLRKHGADFTRTVPFVIVGKDQQSNSSFVAVN 180

Query: 181 MDGSRHRLPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCS 240
           MDGSR  LPLTTVY +LQPI +   +FLQA    +YPVG+LD EKIL  GK+I+ VG+ S
Sbjct: 181 MDGSRQPLPLTTVYNRLQPINS---SFLQAFLYPDYPVGLLDIEKILPPGKDITAVGIYS 240

Query: 241 FKNGVPEIKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNW 300
           F NGVPEIKS +D P+FL EMTKD+M+ DL+ +T F+F  S++LG +SVG+L  + +R W
Sbjct: 241 FNNGVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNFIFLGSVILGIVSVGILSYAAVRTW 300

Query: 301 NRWKQWRQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQ 360
           N+WKQW  QR L    NDS +                   DDE    P+D  +  +PDG+
Sbjct: 301 NKWKQWNHQRELPQRPNDSVV-------------------DDE----PED--ADEIPDGE 360

Query: 361 LCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           LCVIC+ RRR  AFIPCGH VCC RCA +VER+  PKCPVC Q IR S+R+Y S
Sbjct: 361 LCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSMRVYYS 383

[Close]

BLAST of Carg13937 vs. ExPASy Swiss-Prot
Match: O08863 (Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 5.2e-08
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 322 NIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAI 381
           +I +  D  +   D++A++P +E    + + ++C +C+ R     FIPCGH V C+ CA 
Sbjct: 520 DIFVQQDIRSLPTDDIAALPMEEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVCKDCAP 579

Query: 382 SVERDSAPKCPVCRQQIRSSVRIY 406
           S+      KCP+CR  I+ +VR +
Sbjct: 580 SLR-----KCPICRGTIKGTVRTF 598

[Close]

BLAST of Carg13937 vs. ExPASy Swiss-Prot
Match: Q94HV7 (E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07
Identity = 59/240 (24.58%), Postives = 113/240 (47.08%), Query Frame = 0


Query: 172 VNMDGSRHRLPLTTVYRQLQPICATPYTFLQALFGHEYP---VGVLDEEKILSLGKNISV 231
           VN+D S+  L L           A P + +Q   G+      +GV   E+++ +G  ++V
Sbjct: 120 VNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPLTV 179

Query: 232 VGVCSFKNGVPEIKSSK--DFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLG 291
           VG  + ++G+  ++  K    P ++  +  DQ++  L   ++   ++S+ L  L V ++ 
Sbjct: 180 VGE-AVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILIS 239

Query: 292 CSVMRN-WNRWKQWRQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDEL 351
             V+     R +   ++RR Q +     +    +    P+ G  GT+ D           
Sbjct: 240 KPVIEYILKRIEDTLERRRRQFA--LKRVVDAAARRAKPVTGG-GTSRD----------- 299

Query: 352 SSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 406
             + PD  LCV+CL ++  +AF+ CGH  CC  C++ +       CP+CR++I+  ++IY
Sbjct: 300 -GDTPD--LCVVCLDQKYNTAFVECGHMCCCTPCSLQLR-----TCPLCRERIQQVLKIY 336

[Close]

BLAST of Carg13937 vs. ExPASy Swiss-Prot
Match: Q24306 (Death-associated inhibitor of apoptosis 1 OS=Drosophila melanogaster OX=7227 GN=Diap1 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 346 SSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 405
           S+++P+ +LC IC      +AF+PCGH V C +CA SV      KCP+CR+     +R+Y
Sbjct: 382 STSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSV-----TKCPLCRKPFTDVMRVY 438

Query: 406 DS 408
            S
Sbjct: 442 FS 438

[Close]

BLAST of Carg13937 vs. ExPASy Swiss-Prot
Match: P41436 (Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus (isolate Mexico/1963) OX=654905 GN=IAP PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.0e-07
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 344 ELSSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVR 403
           E    V D +LC IC +      F+PCGH V C +CA+SV+     KCP+CR+ + S ++
Sbjct: 217 EKEPQVEDSKLCKICYVEECIVCFVPCGHVVACAKCALSVD-----KCPMCRKIVTSVLK 275

Query: 404 IYDS 408
           +Y S
Sbjct: 277 VYFS 275

[Close]

BLAST of Carg13937 vs. ExPASy TrEMBL
Match: A0A6J1KHU7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 PE=4 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 5.3e-229
Identity = 399/407 (98.03%), Postives = 402/407 (98.77%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHM SDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQP+CATPYTFLQALFGH+YPVGVLDEEKIL LGKNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDST+SQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. ExPASy TrEMBL
Match: A0A6J1HK84 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304 PE=4 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 9.0e-229
Identity = 399/407 (98.03%), Postives = 401/407 (98.53%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDF VVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFAVVNMDGSRHR 180

Query: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240
           LPLTTVYRQLQP+CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360
           QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. ExPASy TrEMBL
Match: A0A6J1KJE8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 PE=4 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 4.8e-222
Identity = 399/456 (87.50%), Postives = 402/456 (88.16%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHM SDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRT-------------------------- 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRT                          
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVKSSFSLLLLWSFSCDSLLDLLFPLL 180

Query: 181 -----------------------VPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 240
                                  VPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ
Sbjct: 181 VARASRFVSAISSERGPNRVGLKVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 240

Query: 241 PICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPEIKSSKDFPHFL 300
           P+CATPYTFLQALFGH+YPVGVLDEEKIL LGKNISVVGVCSFKNGVPEIKS KDFPHFL
Sbjct: 241 PVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPEIKSCKDFPHFL 300

Query: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360
           CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND
Sbjct: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360

Query: 361 STMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 408
           ST+SQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG
Sbjct: 361 STISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 420

[Close]

BLAST of Carg13937 vs. ExPASy TrEMBL
Match: A0A6J1HH89 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304 PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 8.1e-222
Identity = 399/456 (87.50%), Postives = 401/456 (87.94%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RHMISDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRT-------------------------- 180
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRT                          
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVKFSFSLLLLWSFSCDSYWIFFFPLL 180

Query: 181 -----------------------VPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 240
                                  VPFVLVEGHSPYSDF VVNMDGSRHRLPLTTVYRQLQ
Sbjct: 181 VARASRFVSAISSERGPNRVGLKVPFVLVEGHSPYSDFAVVNMDGSRHRLPLTTVYRQLQ 240

Query: 241 PICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPEIKSSKDFPHFL 300
           P+CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPEIKS KDFPHFL
Sbjct: 241 PVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFL 300

Query: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360
           CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND
Sbjct: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360

Query: 361 STMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 408
           STMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG
Sbjct: 361 STMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 420

[Close]

BLAST of Carg13937 vs. ExPASy TrEMBL
Match: A0A6J1JT39 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488642 PE=4 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 1.3e-211
Identity = 374/408 (91.67%), Postives = 388/408 (95.10%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSSSEQALVSLLS+FALSFDGA LGAALAYAA RTVLKLTASCSALDELRKAP V VSDL
Sbjct: 1   MSSSEQALVSLLSQFALSFDGAVLGAALAYAAVRTVLKLTASCSALDELRKAPYVSVSDL 60

Query: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120
           RH+ISDGDSG+SESD KLVVVRGTVEARS VEGNWKS+QPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHIISDGDSGKSESDHKLVVVRGTVEARSSVEGNWKSVQPNVLISQESGDRAVIIQRTQM 120

Query: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVNMDGSRH 180
           CIFNEWKGF GWTSDLRAIFGRTFRKQESTSFRTVPFVLV EGHSPYSDFVVVNMDGSRH
Sbjct: 121 CIFNEWKGFFGWTSDLRAIFGRTFRKQESTSFRTVPFVLVDEGHSPYSDFVVVNMDGSRH 180

Query: 181 RLPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVP 240
            LPLTTVY QLQP+ ATPYTFLQALFGHEYPVGVLDEEKIL LGKNIS VG+CSFKNGVP
Sbjct: 181 PLPLTTVYHQLQPVSATPYTFLQALFGHEYPVGVLDEEKILPLGKNISAVGICSFKNGVP 240

Query: 241 EIKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQW 300
            IKS KDFPHFLCEMTKDQM+LDLVFKTKFLFWSS+VLGSLSVGVLG SV+RNWNRWKQW
Sbjct: 241 VIKSCKDFPHFLCEMTKDQMILDLVFKTKFLFWSSVVLGSLSVGVLGYSVVRNWNRWKQW 300

Query: 301 RQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICL 360
           RQQRRLQDSGNDSTMSQLD SNNIPIYGDFGTASD+E A  P+DE+SSNVPDGQLCVICL
Sbjct: 301 RQQRRLQDSGNDSTMSQLD-SNNIPIYGDFGTASDNEEAVDPEDEVSSNVPDGQLCVICL 360

Query: 361 MRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           MRR+RSAFIPCGHFVCCERCA+SVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 MRRKRSAFIPCGHFVCCERCAMSVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Carg13937 vs. TAIR 10
Match: AT1G54150.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 355.1 bits (910), Expect = 7.3e-98
Identity = 200/414 (48.31%), Postives = 268/414 (64.73%), Query Frame = 0


Query: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60
           MSS E+AL++LL+  ALSFDGA LG  LA +A  + LK  ++ +AL +++ AP V +SDL
Sbjct: 1   MSSPERALLNLLTDIALSFDGAILGLTLAVSAVGSALKYASTNAALKKIKDAPEVSISDL 60

Query: 61  RHMI------SDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVI 120
           R ++      S+ +  +  +DQ++VVVRG V+ +  + G+      NVLIS E+GD+A+I
Sbjct: 61  RSLLPASEDKSETNDNRKSNDQRIVVVRGVVKPK--ISGDEGYKNNNVLISPETGDKALI 120

Query: 121 IQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVN 180
           IQRTQ  +++ WK     T   R +  R+ RK  +   RTVPFV+V +     S FV VN
Sbjct: 121 IQRTQTYVYSGWKRLFQSTGH-RFMLERSLRKHGADFTRTVPFVIVGKDQQSNSSFVAVN 180

Query: 181 MDGSRHRLPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCS 240
           MDGSR  LPLTTVY +LQPI +   +FLQA    +YPVG+LD EKIL  GK+I+ VG+ S
Sbjct: 181 MDGSRQPLPLTTVYNRLQPINS---SFLQAFLYPDYPVGLLDIEKILPPGKDITAVGIYS 240

Query: 241 FKNGVPEIKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNW 300
           F NGVPEIKS +D P+FL EMTKD+M+ DL+ +T F+F  S++LG +SVG+L  + +R W
Sbjct: 241 FNNGVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNFIFLGSVILGIVSVGILSYAAVRTW 300

Query: 301 NRWKQWRQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQ 360
           N+WKQW  QR L    NDS +                   DDE    P+D  +  +PDG+
Sbjct: 301 NKWKQWNHQRELPQRPNDSVV-------------------DDE----PED--ADEIPDGE 360

Query: 361 LCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 408
           LCVIC+ RRR  AFIPCGH VCC RCA +VER+  PKCPVC Q IR S+R+Y S
Sbjct: 361 LCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSMRVYYS 383

[Close]

BLAST of Carg13937 vs. TAIR 10
Match: AT1G59560.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 59.3 bits (142), Expect = 8.3e-09
Identity = 59/240 (24.58%), Postives = 113/240 (47.08%), Query Frame = 0


Query: 172 VNMDGSRHRLPLTTVYRQLQPICATPYTFLQALFGHEYP---VGVLDEEKILSLGKNISV 231
           VN+D S+  L L           A P + +Q   G+      +GV   E+++ +G  ++V
Sbjct: 120 VNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPLTV 179

Query: 232 VGVCSFKNGVPEIKSSK--DFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLG 291
           VG  + ++G+  ++  K    P ++  +  DQ++  L   ++   ++S+ L  L V ++ 
Sbjct: 180 VGE-AVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILIS 239

Query: 292 CSVMRN-WNRWKQWRQQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDEL 351
             V+     R +   ++RR Q +     +    +    P+ G  GT+ D           
Sbjct: 240 KPVIEYILKRIEDTLERRRRQFA--LKRVVDAAARRAKPVTGG-GTSRD----------- 299

Query: 352 SSNVPDGQLCVICLMRRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 406
             + PD  LCV+CL ++  +AF+ CGH  CC  C++ +       CP+CR++I+  ++IY
Sbjct: 300 -GDTPD--LCVVCLDQKYNTAFVECGHMCCCTPCSLQLR-----TCPLCRERIQQVLKIY 336

[Close]

BLAST of Carg13937 vs. TAIR 10
Match: AT4G24204.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.4e-08
Identity = 33/94 (35.11%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 311 DSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPC 370
           D T   ++ S  +   GD  TAS            S +V    LCVIC   RR   F+PC
Sbjct: 34  DWTPPLINESLEVTGKGDVETASFSS---------SDDVDYSTLCVICFEERRNCFFVPC 93

Query: 371 GHFVCCERCAISVERDSAPKCPVCRQQIRSSVRI 405
           GH   C  CA  +  + +  CP+CR+ IR S R+
Sbjct: 94  GHSATCRGCAQRILSEESKVCPICRRVIRKSKRL 118

[Close]

BLAST of Carg13937 vs. TAIR 10
Match: AT4G24204.2 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.4e-08
Identity = 33/94 (35.11%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 311 DSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPC 370
           D T   ++ S  +   GD  TAS            S +V    LCVIC   RR   F+PC
Sbjct: 68  DWTPPLINESLEVTGKGDVETASFSS---------SDDVDYSTLCVICFEERRNCFFVPC 127

Query: 371 GHFVCCERCAISVERDSAPKCPVCRQQIRSSVRI 405
           GH   C  CA  +  + +  CP+CR+ IR S R+
Sbjct: 128 GHSATCRGCAQRILSEESKVCPICRRVIRKSKRL 152

[Close]

BLAST of Carg13937 vs. TAIR 10
Match: AT4G24204.3 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 5.4e-08
Identity = 33/94 (35.11%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 311 DSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPC 370
           D T   ++ S  +   GD  TAS            S +V    LCVIC   RR   F+PC
Sbjct: 89  DWTPPLINESLEVTGKGDVETASFSS---------SDDVDYSTLCVICFEERRNCFFVPC 148

Query: 371 GHFVCCERCAISVERDSAPKCPVCRQQIRSSVRI 405
           GH   C  CA  +  + +  CP+CR+ IR S R+
Sbjct: 149 GHSATCRGCAQRILSEESKVCPICRRVIRKSKRL 173

The following BLAST results are available for this feature:

BLAST of Carg13937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025892.1	1.2e-232	100.00	E3 ubiquitin-protein ligase SPL2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593550.1	1.4e-231	99.51	E3 ubiquitin-protein ligase SPL2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023000260.1	1.1e-228	98.03	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita maxima]	[more]
XP_022964220.1	1.9e-228	98.03	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita moschata]	[more]
XP_023514152.1	1.2e-227	97.79	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg13937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYH3	1.0e-96	48.31	E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV...	[more]
O08863	5.2e-08	33.33	Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE...	[more]
Q94HV7	1.2e-07	24.58	E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV...	[more]
Q24306	2.0e-07	41.94	Death-associated inhibitor of apoptosis 1 OS=Drosophila melanogaster OX=7227 GN=...	[more]
P41436	2.0e-07	40.63	Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus (isolate Mexico/1963...	[more]

BLAST of Carg13937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHU7	5.3e-229	98.03	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 P...	[more]
A0A6J1HK84	9.0e-229	98.03	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304...	[more]
A0A6J1KJE8	4.8e-222	87.50	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 P...	[more]
A0A6J1HH89	8.1e-222	87.50	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304...	[more]
A0A6J1JT39	1.3e-211	91.67	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488642 P...	[more]

BLAST of Carg13937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54150.1	7.3e-98	48.31	E3 Ubiquitin ligase family protein	[more]
AT1G59560.1	8.3e-09	24.58	E3 Ubiquitin ligase family protein	[more]
AT4G24204.1	5.4e-08	35.11	RING/U-box superfamily protein	[more]
AT4G24204.2	5.4e-08	35.11	RING/U-box superfamily protein	[more]
AT4G24204.3	5.4e-08	35.11	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 405..407
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 353..400 e-value: 3.7E-14 score: 52.3
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 349..401
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 355..394 e-value: 0.0033 score: 26.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 355..395 score: 10.704165
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 330..406 e-value: 5.4E-17 score: 63.0
IPR022170	E3 Ubiquitin ligase MUL1-like	PFAM	PF12483	GIDE	coord: 142..285 e-value: 5.6E-33 score: 113.6
IPR044247	E3 ubiquitin-protein ligase SPL2-like	PANTHER	PTHR47355	E3 UBIQUITIN-PROTEIN LIGASE SPL2	coord: 1..407

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13937-RA	Carg13937-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity