Carg13806 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg13806
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cyclin-dependent protein kinase inhibitor SMR2-like
Location	Carg_Chr03: 4567239 .. 4567691 (+)
RNA-Seq Expression	Carg13806
Synteny	Carg13806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAGGATTCCAAGAAATCTCCCCCCTCACGCACCCTCGCATTTCCTTCACCGCCATTACTACGCCACAATCCTTCCGCGTCAATTTGAACGACGCCACGAACCAGATCGATTTCATTTTCGCTCTAAACGATGATCCTCCACTCGCTTCCGATTCCGTTTCCGTTTCTCTCGATCGTTCCGCTCCACCAGACTCGATCTCCGACGACGACGACGGTTTCAGAACGCCGACGTCTTCCGATCATAAGATTCCGGTGGTTCAACAGTGTCCGCCGGCTCCTAGACGACCGAAGCCGATCTCCTGCTCCAGAACCTTGCCGAGAACTTCAGGTGTTCGTAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGCGGACTCGATCTTCTGCCCCGATTTGCTGCACCAGAAGACTAAGAAAGCTCGGAAGAACGGTAATGGCGGTGAATGA

mRNA sequence

ATGGCCTCAGGATTCCAAGAAATCTCCCCCCTCACGCACCCTCGCATTTCCTTCACCGCCATTACTACGCCACAATCCTTCCGCGTCAATTTGAACGACGCCACGAACCAGATCGATTTCATTTTCGCTCTAAACGATGATCCTCCACTCGCTTCCGATTCCGTTTCCGTTTCTCTCGATCGTTCCGCTCCACCAGACTCGATCTCCGACGACGACGACGGTTTCAGAACGCCGACGTCTTCCGATCATAAGATTCCGGTGGTTCAACAGTGTCCGCCGGCTCCTAGACGACCGAAGCCGATCTCCTGCTCCAGAACCTTGCCGAGAACTTCAGGTGTTCGTAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGCGGACTCGATCTTCTGCCCCGATTTGCTGCACCAGAAGACTAAGAAAGCTCGGAAGAACGGTAATGGCGGTGAATGA

Coding sequence (CDS)

ATGGCCTCAGGATTCCAAGAAATCTCCCCCCTCACGCACCCTCGCATTTCCTTCACCGCCATTACTACGCCACAATCCTTCCGCGTCAATTTGAACGACGCCACGAACCAGATCGATTTCATTTTCGCTCTAAACGATGATCCTCCACTCGCTTCCGATTCCGTTTCCGTTTCTCTCGATCGTTCCGCTCCACCAGACTCGATCTCCGACGACGACGACGGTTTCAGAACGCCGACGTCTTCCGATCATAAGATTCCGGTGGTTCAACAGTGTCCGCCGGCTCCTAGACGACCGAAGCCGATCTCCTGCTCCAGAACCTTGCCGAGAACTTCAGGTGTTCGTAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGCGGACTCGATCTTCTGCCCCGATTTGCTGCACCAGAAGACTAAGAAAGCTCGGAAGAACGGTAATGGCGGTGAATGA

Protein sequence

MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARKNGNGGE

Homology

[Close]

BLAST of Carg13806 vs. NCBI nr
Match: XP_022950456.1 (uncharacterized protein LOC111453550 [Cucurbita moschata])

HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD
Sbjct: 65  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 124

Query: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 120
           RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY
Sbjct: 125 RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 184

Query: 121 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 151
           ISDEIADSIFCPDLLHQKTKKARKNGNGGE
Sbjct: 185 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 214

[Close]

BLAST of Carg13806 vs. NCBI nr
Match: KAG6603657.1 (Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033839.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD
Sbjct: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60

Query: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 120
           RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY
Sbjct: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 120

Query: 121 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 151
           ISDEIADSIFCPDLLHQKTKKARKNGNGGE
Sbjct: 121 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 150

[Close]

BLAST of Carg13806 vs. NCBI nr
Match: XP_038877666.1 (cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 101/157 (64.33%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MAS FQEIS     +ISF+AIT   +FR+      NQIDFIF+LN++P           D
Sbjct: 1   MASEFQEISLTLPDQISFSAITPQPTFRL------NQIDFIFSLNNEP-----------D 60

Query: 61  RSAPPDSIS---DDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLP-RTSGVRRG 120
           R AP +SIS   DDDDGFRTP SSDHKIPVV+ CPPAP+RPKPIS SRT   R SGVRRG
Sbjct: 61  RLAPAESISAVDDDDDGFRTPVSSDHKIPVVRHCPPAPKRPKPISLSRTSSMRASGVRRG 120

Query: 121 FRVYISDEIADSIFCPDLLHQKT-KKARK--NGNGGE 151
           FRVYISDEI DSIFC DLLHQK+ KKARK  + NGGE
Sbjct: 121 FRVYISDEIVDSIFCSDLLHQKSKKKARKDDDDNGGE 140

[Close]

BLAST of Carg13806 vs. NCBI nr
Match: XP_022143885.1 (cyclin-dependent protein kinase inhibitor SMR2-like [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 3.6e-36
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MAS FQEIS    P+IS  +I +P+SF +NL DA NQIDF+FALN            +  
Sbjct: 1   MASHFQEISLSPSPQISLPSI-SPESFLLNLEDANNQIDFLFALN-----------TNQQ 60

Query: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISC--SRTLPR-TSGVRRGF 120
           ++   DSIS DDDGFRTPTSSDHKIPV++QCPPAPRRPKPISC   R+ PR  SGVRRGF
Sbjct: 61  QARRDDSISADDDGFRTPTSSDHKIPVIKQCPPAPRRPKPISCRSRRSSPRLASGVRRGF 120

Query: 121 RVYISDEIADSIFCPDLLHQKTKKARKNGNGGE 151
           RVYISDEI +SIF     HQK KKAR++ +  E
Sbjct: 121 RVYISDEIVESIFSSSFAHQKMKKARRDDHEDE 141

[Close]

BLAST of Carg13806 vs. NCBI nr
Match: XP_023518540.1 (uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-33
Identity = 93/158 (58.86%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MAS F+EIS             TP+SFRV L DA +QI+FIFA+ ++ PLA +S     D
Sbjct: 62  MASQFREIS------------LTPESFRVKLEDA-DQIEFIFAV-ENRPLALES-QQRCD 121

Query: 61  RSAPPDSI----SDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRG 120
            SAP +S+     DD+DGFRTPTSSD+KIP+V+ CPPAPRRPKPIS SRT PR SGVRRG
Sbjct: 122 SSAPEESLLISAVDDEDGFRTPTSSDYKIPLVEHCPPAPRRPKPISLSRTSPRVSGVRRG 181

Query: 121 FRVYISDEIADSIFC----PDLLHQKTKKARKNGNGGE 151
           FRVYISDEI DSIF      D L  K KKARK+ +GG+
Sbjct: 182 FRVYISDEIVDSIFSSSFGSDFLQHKNKKARKDDHGGK 204

[Close]

BLAST of Carg13806 vs. ExPASy Swiss-Prot
Match: Q9LZ60 (Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 66  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISD 125
           D   ++++G +TPTSSDHKIP V+   CPPAPR+PKP   S T  + + V    R+ I  
Sbjct: 35  DPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTPVNVVNRIPIDL 94

Query: 126 EIADSIFCPDLLHQKTKKARK 145
                +F  D L ++ KK+RK
Sbjct: 95  SREIEMFFED-LDRRIKKSRK 114

[Close]

BLAST of Carg13806 vs. ExPASy Swiss-Prot
Match: Q9SGE2 (Cyclin-dependent protein kinase inhibitor SMR2 OS=Arabidopsis thaliana OX=3702 GN=SMR2 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 77  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLL 136
           TPTSSDHKIP V+ CPP PR RP+ IS ++    +  +R      +  +  +++F  +  
Sbjct: 41  TPTSSDHKIPEVETCPPPPRKRPREISLTKKTRLSKDLRFFEATDVGSQEVETLFVHEPN 100

Query: 137 HQKTKKARKN 146
           H + KK R N
Sbjct: 101 HVR-KKRRSN 109

[Close]

BLAST of Carg13806 vs. ExPASy TrEMBL
Match: A0A6J1GEW0 (uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC111453550 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.3e-79
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD
Sbjct: 65  MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 124

Query: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 120
           RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY
Sbjct: 125 RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTLPRTSGVRRGFRVY 184

Query: 121 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 151
           ISDEIADSIFCPDLLHQKTKKARKNGNGGE
Sbjct: 185 ISDEIADSIFCPDLLHQKTKKARKNGNGGE 214

[Close]

BLAST of Carg13806 vs. ExPASy TrEMBL
Match: A0A6J1CQ22 (cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=3673 GN=LOC111013692 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 92/153 (60.13%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIFALNDDPPLASDSVSVSLD 60
           MAS FQEIS    P+IS  +I +P+SF +NL DA NQIDF+FALN            +  
Sbjct: 1   MASHFQEISLSPSPQISLPSI-SPESFLLNLEDANNQIDFLFALN-----------TNQQ 60

Query: 61  RSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISC--SRTLPR-TSGVRRGF 120
           ++   DSIS DDDGFRTPTSSDHKIPV++QCPPAPRRPKPISC   R+ PR  SGVRRGF
Sbjct: 61  QARRDDSISADDDGFRTPTSSDHKIPVIKQCPPAPRRPKPISCRSRRSSPRLASGVRRGF 120

Query: 121 RVYISDEIADSIFCPDLLHQKTKKARKNGNGGE 151
           RVYISDEI +SIF     HQK KKAR++ +  E
Sbjct: 121 RVYISDEIVESIFSSSFAHQKMKKARRDDHEDE 141

[Close]

BLAST of Carg13806 vs. ExPASy TrEMBL
Match: A0A0A0KZJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-25
Identity = 90/162 (55.56%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFI---FALNDDPPLASDSVSV 60
           MAS FQEISP   P      +   Q   + L    + IDF+   F+    PP +  S S 
Sbjct: 1   MASEFQEISPGPLP------LPDHQISLIRL----DHIDFLFDSFSSISTPPNSLPSPSR 60

Query: 61  SLDRSAPPDSIS---DDD---DGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-PRT 120
           S+ +  PP SIS   DDD   DGF TP SS HKIPV+  CPPAP RPKPIS SRTL PR 
Sbjct: 61  SV-QDQPPVSISAVDDDDEHNDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSPRA 120

Query: 121 SGVRRGFRVYISDEIADSIFCPDLLHQKT-KKARK-NGNGGE 151
           SGVRRGF VYISD+I DSIF  DLLHQK+ KKARK + NGGE
Sbjct: 121 SGVRRGFLVYISDQIVDSIFSDDLLHQKSKKKARKDDDNGGE 151

[Close]

BLAST of Carg13806 vs. ExPASy TrEMBL
Match: A0A5A7SN91 (Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00290 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 87/163 (53.37%), Postives = 99/163 (60.74%), Query Frame = 0


Query: 1   MASGFQEISPLTHPRISFTAITTPQSFRVNLNDATNQIDFIF-----ALNDDPPLASDSV 60
           M S FQEISP   P +    +   Q   + L    + IDF+F     ++   P L S S 
Sbjct: 1   MTSEFQEISP--RPPL---PLPDHQISLIRL----DHIDFLFDSFSSSITTPPSLPSPSD 60

Query: 61  SVSLDRSAPPDSIS--DDD----DGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSRTL-P 120
           S+   +  PP SIS  DDD    DGF TP SS HKIPV+  CPPAP RPKPIS SRTL  
Sbjct: 61  SI---QDQPPVSISAVDDDEEHSDGFTTPISSHHKIPVIPHCPPAPSRPKPISLSRTLSA 120

Query: 121 RTSGVRRGFRVYISDEIADSIFCPDLLHQKTKKARK-NGNGGE 151
           R S VRRGF VYISDEI DSIF  DLLH K+KKARK + NGGE
Sbjct: 121 RASAVRRGFLVYISDEIVDSIFSDDLLHHKSKKARKDDDNGGE 151

[Close]

BLAST of Carg13806 vs. ExPASy TrEMBL
Match: A0A5D3AH22 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.0e-12
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0


Query: 57  VSLDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRRPKPISCSR----TLPRTSG 116
           +SL      D   DDDDGF+TPTS DHKIPV++QCPPAPR+PKP+S  +    + P + G
Sbjct: 94  ISLGELKANDDGDDDDDGFKTPTSLDHKIPVMKQCPPAPRKPKPLSSKKRKPSSPPSSGG 153

Query: 117 VRRGFRVYISDEIADSIFCPDLL---HQKTKKARK 145
            R   ++  + E+ +S+F  D+L   H+K KKARK
Sbjct: 154 DRNLLKIDFAKEV-ESLFPSDVLADIHRKVKKARK 187

[Close]

BLAST of Carg13806 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 66  DSISDDDDGFRTPTSSDHKIPVVQQ--CPPAPRRPKPISCSRTLPRTSGVRRGFRVYISD 125
           D   ++++G +TPTSSDHKIP V+   CPPAPR+PKP   S T  + + V    R+ I  
Sbjct: 35  DPTVNEEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTPVNVVNRIPIDL 94

Query: 126 EIADSIFCPDLLHQKTKKARK 145
                +F  D L ++ KK+RK
Sbjct: 95  SREIEMFFED-LDRRIKKSRK 114

[Close]

BLAST of Carg13806 vs. TAIR 10
Match: AT1G08180.1 (unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 77  TPTSSDHKIPVVQQCPPAPR-RPKPISCSRTLPRTSGVRRGFRVYISDEIADSIFCPDLL 136
           TPTSSDHKIP V+ CPP PR RP+ IS ++    +  +R      +  +  +++F  +  
Sbjct: 41  TPTSSDHKIPEVETCPPPPRKRPREISLTKKTRLSKDLRFFEATDVGSQEVETLFVHEPN 100

Query: 137 HQKTKKARKN 146
           H + KK R N
Sbjct: 101 HVR-KKRRSN 109

[Close]

BLAST of Carg13806 vs. TAIR 10
Match: AT2G37610.1 (unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.0e-04
Identity = 16/39 (41.03%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 59  LDRSAPPDSISDDDDGFRTPTSSDHKIPVVQQCPPAPRR 98
           LD     + + +++DGF+TPT  +++IP+V++CPPAP +
Sbjct: 80  LDEEEEEEVVEEENDGFKTPTRPENRIPIVRECPPAPMK 118

The following BLAST results are available for this feature:

BLAST of Carg13806 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950456.1	1.3e-78	100.00	uncharacterized protein LOC111453550 [Cucurbita moschata]	[more]
KAG6603657.1	1.3e-78	100.00	Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma ...	[more]
XP_038877666.1	1.1e-37	64.33	cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]	[more]
XP_022143885.1	3.6e-36	60.13	cyclin-dependent protein kinase inhibitor SMR2-like [Momordica charantia]	[more]
XP_023518540.1	3.7e-33	58.86	uncharacterized protein LOC111782016 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg13806 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ60	1.8e-06	41.98	Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SGE2	1.7e-04	38.57	Cyclin-dependent protein kinase inhibitor SMR2 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Carg13806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GEW0	6.3e-79	100.00	uncharacterized protein LOC111453550 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]
A0A6J1CQ22	1.7e-36	60.13	cyclin-dependent protein kinase inhibitor SMR2-like OS=Momordica charantia OX=36...	[more]
A0A0A0KZJ9	3.1e-25	55.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295530 PE=4 SV=1	[more]
A0A5A7SN91	1.2e-24	53.37	Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa ...	[more]
A0A5D3AH22	3.0e-12	47.37	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A01G241600v1 P...	[more]

BLAST of Carg13806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02420.1	1.3e-07	41.98	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G08180.1	1.2e-05	38.57	unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bact...	[more]
AT2G37610.1	3.0e-04	41.03	unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..79
None	No IPR available	PANTHER	PTHR33142:SF79	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR3	coord: 61..146
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 61..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13806-RA	Carg13806-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication