Carg13452 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCATCATAAAGAGACAGGATGCCAAGCTCCTCCAGAAGCTCCCAAACTCTGTGCAAACAACTGTGGGTTTTTTGGAAGTGCTGCAACTATGAACCTATGTTCAAAATGCCACAAAGACTTCATCATGAAGCAAGAACAGGTCAAGCTTGCAGCATCCTCTATCGGAAGCATTGTGAATGGTGGACCAAATGACCATGGGAAGAAGGCTGCTGTTGTCACTTCTCCAACCAAGCTAGAAATCGAACCAGCTATATCATCCATCATTCCAACACAACCATCTTGGACTTCTCCAAATGCAAGCAGCAGCACCAACATAGAGAAGGTAAAAGCGAGCCCAAACAGGTGCAGCAGCTGCAGGAAACGCGTTGGACTAACCGGGTTCAGCTGTCGTTGTGGAAGCCTCTTCTGTGCAGTTCATCGCTACTCCGACAAACACGACTGCACGTTTGATTATCAAGCTGTCGGTCGGGAGGCAATCGCAAAAGCCAACCCCGTGGTGAAAGCTGAAAAGCTGGACAAGATCTAAAGAGGGAAGAACACCATGGATCCAACAGTGGCCGAGTTGATGTTTTTTTTGTGAAAAGGGGTTGTGGGCGAAGGCTTGTGAGAGACAACGATCGGGGGCTGTGATTGTAGGTTTTGTTTGGCTGTTTGTGGGGTTGAGCCAAATTGTTGTTAAATGGACTGAAAAATTATCAAAATCCTTAATTTTATGTTTTTTTTTTATTTTTTATTGAAAAAAGATTAATTAGTTACCAAATAAGGTGATTAATTATCTTTAAATTAAACTTATTTAAATGAGATAATTAATTTCTACACTTAATTCATTTAATTAAGGTAATTAACTCATTAGCCTGAATGGATAATAAAAAGGAATTTTATTCAATAAATTTCAGAAAATAATTAAATAAAGAAATATTAAAAAATAAATAAAAAATAATTGGCAATTGTAAATTGTCCGGTTACCATAATGACGAAGAAGACACGTCACCAGCCGATTAAGAACAGAGCAAAACGAGGGAGGGTATAAAGGTAAATAAGGAAAAGAAGAGGGCTATTTTGGTAAAGTAGGTGAAAAATGTTCAATACGCGTCTCTATGAGGCCCGTAGGACATCGTCCTTACCGACCTTTCAATCCCTTCATATTCCTTATTTCCCCGTTTCTCTCTCATCCCCTCTAATAAACCCAACCTCTTCAATCAAATCTTCTCGTTCTTATCATCACGCTCTCTGAATCTCTGAGGATTTTTTTTTTGTTGTTGTTGAGGATCCGATCGGGAGATATGGCGCAGAGGACTGAGAAGGAGGAGACGGAGTTCAAAGTACCGGAGACGATCACGCTCTGCGTCAACAACTGCGGTCTGACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTGCTACGGCGGCGTCGGCGACGGCGTCGGCGACGGCGTCCATGGCTATGAAGTTTTCCGGTGAGAAAAGTCCGAGATCTACTACGTCTCGCTCGCCGGAGAAATTTCGGTTCGTTGCTGAGTCGAAGAGGATTACGACGGCGGCTGATCGTCCGAAGCCTGACGAATCGGCCAAGCGAGTGGTGAATCGGTGCTCCGGATGTAGAAAACGCGTCGGATTAACCGGATTTAGGTGCCGATGCGGAGATTTGTTCTGTGCGGAGCACCGTTATTCAGATCGCCACGATTGTAGCTTCGATTACAAGTCCGCTGGTCGTGAGGCGATCGCGAGGGAGAATCCAGTGGTGAAAGCGGCGAAGATCGTGAGAGTTTAA ATGGAGCATCATAAAGAGACAGGATGCCAAGCTCCTCCAGAAGCTCCCAAACTCTGTGCAAACAACTGTGGGTTTTTTGGAAGTGCTGCAACTATGAACCTATGTTCAAAATGCCACAAAGACTTCATCATGAAGCAAGAACAGGTCAAGCTTGCAGCATCCTCTATCGGAAGCATTGTGAATGGTGGACCAAATGACCATGGGAAGAAGGCTGCTGTTGTCACTTCTCCAACCAAGCTAGAAATCGAACCAGCTATATCATCCATCATTCCAACACAACCATCTTGGACTTCTCCAAATGCAAGCAGCAGCACCAACATAGAGAAGGTAAAAGCGAGCCCAAACAGGTGCAGCAGCTGCAGGAAACGCGTTGGACTAACCGGGTTCAGCTGTCGTTGTGGAAGCCTCTTCTGTGCAGTTCATCGCTACTCCGACAAACACGACTGCACGTTTGATTATCAAGCTGTCGGTCGGGAGGCAATCGCAAAAGCCAACCCCGTGAGGACTGAGAAGGAGGAGACGGAGTTCAAAGTACCGGAGACGATCACGCTCTGCGTCAACAACTGCGGTCTGACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTGCTACGGCGGCGTCGGCGACGGCGTCGGCGACGGCGTCCATGGCTATGAAGTTTTCCGGTGAGAAAAGTCCGAGATCTACTACGTCTCGCTCGCCGGAGAAATTTCGGTTCGTTGCTGAGTCGAAGAGGATTACGACGGCGGCTGATCGTCCGAAGCCTGACGAATCGGCCAAGCGAGTGGTGAATCGGTGCTCCGGATGTAGAAAACGCGTCGGATTAACCGGATTTAGGTGCCGATGCGGAGATTTGTTCTGTGCGGAGCACCGTTATTCAGATCGCCACGATTGTAGCTTCGATTACAAGTCCGCTGGTCGTGAGGCGATCGCGAGGGAGAATCCAGTGGTGAAAGCGGCGAAGATCGTGAGAGTTTAA ATGGAGCATCATAAAGAGACAGGATGCCAAGCTCCTCCAGAAGCTCCCAAACTCTGTGCAAACAACTGTGGGTTTTTTGGAAGTGCTGCAACTATGAACCTATGTTCAAAATGCCACAAAGACTTCATCATGAAGCAAGAACAGGTCAAGCTTGCAGCATCCTCTATCGGAAGCATTGTGAATGGTGGACCAAATGACCATGGGAAGAAGGCTGCTGTTGTCACTTCTCCAACCAAGCTAGAAATCGAACCAGCTATATCATCCATCATTCCAACACAACCATCTTGGACTTCTCCAAATGCAAGCAGCAGCACCAACATAGAGAAGGTAAAAGCGAGCCCAAACAGGTGCAGCAGCTGCAGGAAACGCGTTGGACTAACCGGGTTCAGCTGTCGTTGTGGAAGCCTCTTCTGTGCAGTTCATCGCTACTCCGACAAACACGACTGCACGTTTGATTATCAAGCTGTCGGTCGGGAGGCAATCGCAAAAGCCAACCCCGTGAGGACTGAGAAGGAGGAGACGGAGTTCAAAGTACCGGAGACGATCACGCTCTGCGTCAACAACTGCGGTCTGACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTGCTACGGCGGCGTCGGCGACGGCGTCGGCGACGGCGTCCATGGCTATGAAGTTTTCCGGTGAGAAAAGTCCGAGATCTACTACGTCTCGCTCGCCGGAGAAATTTCGGTTCGTTGCTGAGTCGAAGAGGATTACGACGGCGGCTGATCGTCCGAAGCCTGACGAATCGGCCAAGCGAGTGGTGAATCGGTGCTCCGGATGTAGAAAACGCGTCGGATTAACCGGATTTAGGTGCCGATGCGGAGATTTGTTCTGTGCGGAGCACCGTTATTCAGATCGCCACGATTGTAGCTTCGATTACAAGTCCGCTGGTCGTGAGGCGATCGCGAGGGAGAATCCAGTGGTGAAAGCGGCGAAGATCGTGAGAGTTTAA MEHHKETGCQAPPEAPKLCANNCGFFGSAATMNLCSKCHKDFIMKQEQVKLAASSIGSIVNGGPNDHGKKAAVVTSPTKLEIEPAISSIIPTQPSWTSPNASSSTNIEKVKASPNRCSSCRKRVGLTGFSCRCGSLFCAVHRYSDKHDCTFDYQAVGREAIAKANPVRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAATAASATASATASMAMKFSGEKSPRSTTSRSPEKFRFVAESKRITTAADRPKPDESAKRVVNRCSGCRKRVGLTGFRCRCGDLFCAEHRYSDRHDCSFDYKSAGREAIARENPVVKAAKIVRV Homology
BLAST of Carg13452 vs. NCBI nr
Match: KAG7025662.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 661.8 bits (1706), Expect = 3.2e-186 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0
BLAST of Carg13452 vs. NCBI nr
Match: RXI05438.1 (hypothetical protein DVH24_006695 [Malus domestica]) HSP 1 Score: 436.8 bits (1122), Expect = 1.7e-118 Identity = 225/330 (68.18%), Postives = 268/330 (81.21%), Query Frame = 0
BLAST of Carg13452 vs. NCBI nr
Match: KAF2319417.1 (hypothetical protein GH714_015635 [Hevea brasiliensis]) HSP 1 Score: 367.1 bits (941), Expect = 1.6e-97 Identity = 198/355 (55.77%), Postives = 240/355 (67.61%), Query Frame = 0
BLAST of Carg13452 vs. NCBI nr
Match: KAG6593312.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345.9 bits (886), Expect = 3.8e-91 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Carg13452 vs. NCBI nr
Match: BAO74165.1 (zinc finger protein [Cucurbita pepo subsp. ovifera]) HSP 1 Score: 344.4 bits (882), Expect = 1.1e-90 Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy Swiss-Prot
Match: A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2) HSP 1 Score: 199.9 bits (507), Expect = 4.5e-50 Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy Swiss-Prot
Match: A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 4.5e-50 Identity = 100/164 (60.98%), Postives = 120/164 (73.17%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy Swiss-Prot
Match: Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.3e-49 Identity = 99/166 (59.64%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy Swiss-Prot
Match: Q9LHJ8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.5e-45 Identity = 101/168 (60.12%), Postives = 121/168 (72.02%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy Swiss-Prot
Match: Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2) HSP 1 Score: 172.9 bits (437), Expect = 5.9e-42 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy TrEMBL
Match: A0A498KD19 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_006695 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 8.0e-119 Identity = 225/330 (68.18%), Postives = 268/330 (81.21%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy TrEMBL
Match: A0A6A6N1X4 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_015635 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 7.8e-98 Identity = 198/355 (55.77%), Postives = 240/355 (67.61%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy TrEMBL
Match: A0A024FCJ6 (Zinc finger protein OS=Cucurbita pepo subsp. ovifera OX=184141 GN=PBG PE=2 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 5.4e-91 Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy TrEMBL
Match: A0A024FBV1 (Zinc finger protein OS=Cucurbita pepo subsp. pepo OX=3664 GN=PBG PE=2 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 7.1e-91 Identity = 164/167 (98.20%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Carg13452 vs. ExPASy TrEMBL
Match: A0A024FBB2 (Zinc finger protein OS=Cucurbita pepo subsp. pepo OX=3664 GN=PBG PE=2 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 4.6e-90 Identity = 163/167 (97.60%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Carg13452 vs. TAIR 10
Match: AT3G12630.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 184.9 bits (468), Expect = 1.1e-46 Identity = 101/168 (60.12%), Postives = 121/168 (72.02%), Query Frame = 0
BLAST of Carg13452 vs. TAIR 10
Match: AT1G51200.1 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-43 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Carg13452 vs. TAIR 10
Match: AT1G51200.2 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-43 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Carg13452 vs. TAIR 10
Match: AT1G51200.3 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-43 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 0
BLAST of Carg13452 vs. TAIR 10
Match: AT1G51200.4 (A20/AN1-like zinc finger family protein ) HSP 1 Score: 172.9 bits (437), Expect = 4.2e-43 Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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