Carg12523 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGGCCAATATAGCACTCAGCCGCTCCATTTTCTCATACGAACTGTTTGCTATTTTTCTCTGCACAAAGAAAAAGAAAGAGACAGGCCATGGAATCTACCGAGTTTGAACACACTCGAATTGTCTGGTTCTGAAGCTAAACTTTCATCAAACCGGTAACTCTCTCTCTCTCTCTCTCTGAACTGTTGATTGGTTTCCCAGAAAACGGGAGGCTAATAAAAAGTAGAGAATTCTTCTGTATTTCAAGCGTATGTGTTGAACTCGGTCATAATGACGAACTCTGCGGGCCATTGTTGTGTTCTACTGAAAACTACGCAATTCTTTTGGCGAATAATCTGATCATCTGTTTTTTCATCCTCCCAGATCGCCACAAGTTGAGAATTCTTCTGTCCGTTGGATCTGCTTCATTTTCCTTCTCATTGCTGATGAAGAGTGAATTCCAAATTGTGAATGAAACTGAGCCTTTGTCTGCTTCCTGTAGCTTTTAACTGTATTAGAGTCGGTAATATTTGATAGTGCCAAGAATAGAGGGGAGCGGGGGGTTTTCTTCAGCGATGGGATTATGGCTATTAGCTTCAACTGGGCCACCAATTAAACGAAGAGCGGGTTTAAGAATAAAACAGGCGGGTCGAAGTTCATATAGCGGCAGCTAG ATGGAAAAGGCCAATATAGCACTCAGCCGCTCCATTTTCTCATACGAACTGTTTGCTATTTTTCTCTGCACAAAGAAAAAGAAAGAGACAGGCCATGGAATCTACCGAGGGAGCGGGGGGTTTTCTTCAGCGATGGGATTATGGCTATTAGCTTCAACTGGGCCACCAATTAAACGAAGAGCGGGTTTAAGAATAAAACAGGCGGGTCGAAGTTCATATAGCGGCAGCTAG ATGGAAAAGGCCAATATAGCACTCAGCCGCTCCATTTTCTCATACGAACTGTTTGCTATTTTTCTCTGCACAAAGAAAAAGAAAGAGACAGGCCATGGAATCTACCGAGGGAGCGGGGGGTTTTCTTCAGCGATGGGATTATGGCTATTAGCTTCAACTGGGCCACCAATTAAACGAAGAGCGGGTTTAAGAATAAAACAGGCGGGTCGAAGTTCATATAGCGGCAGCTAG MEKANIALSRSIFSYELFAIFLCTKKKKETGHGIYRGSGGFSSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS Homology
BLAST of Carg12523 vs. NCBI nr
Match: KAG7017270.1 (hypothetical protein SDJN02_19133, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 153.7 bits (387), Expect = 6.5e-34 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of Carg12523 vs. NCBI nr
Match: KAG7027939.1 (hypothetical protein SDJN02_09118, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 77.8 bits (190), Expect = 4.5e-11 Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Carg12523 vs. NCBI nr
Match: KAG2690634.1 (hypothetical protein I3760_09G197200 [Carya illinoinensis] >KAG6697443.1 hypothetical protein I3842_09G199700 [Carya illinoinensis] >KAG7964878.1 hypothetical protein I3843_09G193900 [Carya illinoinensis]) HSP 1 Score: 57.0 bits (136), Expect = 8.2e-05 Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of Carg12523 vs. NCBI nr
Match: KAG8647666.1 (hypothetical protein MANES_09G095750v8 [Manihot esculenta]) HSP 1 Score: 57.0 bits (136), Expect = 8.2e-05 Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0
BLAST of Carg12523 vs. ExPASy TrEMBL
Match: A0A5J5Q3W3 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G163600v1 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.8e-04 Identity = 26/32 (81.25%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of Carg12523 vs. ExPASy TrEMBL
Match: A0A5D2XZ33 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A09G165200v1 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.8e-04 Identity = 26/32 (81.25%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of Carg12523 vs. ExPASy TrEMBL
Match: A0A5D2P4H2 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G181400v1 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.8e-04 Identity = 26/32 (81.25%), Postives = 26/32 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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