Carg12519 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATTTGCATCTCTTGGTGAGGAGAAACGAAAATACGCTGCGATTTCTTCCCCTCTTTTCTATTGAGGTCCAAATTTGAATTGCCTTCTCTATAGTCTCAAGAAGTTTCAGAGGCCAAAAGTTTCCTTCCTTCATTCTTTTAGGGTTTACGCTCTCATTTGCAACTCAGAATCAGATCACCTCCCCAATTTGCTAAGTTGAGATAGGCAGCCATGGATTGGGGCAACGTTACTGCTGAGGATCTGATCGATGCGCTTCGAGAGGTCGATTGGTCATCGCCTCCTCGGCCTATCTCCGAGTTCTTCGCCAGGTTCACTTTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAGTGCAATCTCTATTAGTACGATGACTTTCTCCTACAATTTATTCGAGTTAATCATTTCTTTATGTATACATATATATATGAAATTTTGACATCAATTTTCGCTGAGAGTCATGGTTGCTTAAGTGAGGCTGATTCACACTACGAGGTGCTTCTGATTGTAACGTATTACATATCGGTTTAGTTCGGCTTTCACGAATCCAGTCCACACGGAGCTATATGCTCTGAAAGCGAAATGGAACATGATTACGCGATGTTCAATTTGTAAAGGGAAAATCAAGTTATATGTCTGACGTTGTAGGCTCGACTGTTTGAGTTAGTGAATTTACATGTTATGCAAACAAGTTGAAATCTATATATGCGTTGCTTCTTTTATTTCTTTCAGTTTTCCTAGGAAATCATGTCGTAATGTGTCCCAAATAGTTGATCATGGATTATTTTAATTTACTTGTTAGGCAAACAAGCTGAAATCTATTCACGTCATTTCATTTATAATCTGGTTGCGATGCAGTGCCTCGTTCATCCTACTAATTTGGAATCTTAATATCTTGCATTTGCAGTTACCGAACCAACTATTTCATTATGATTGTTTTCATTCTTGGTGAGTAAAGTTTCTTATATCTGCATTTATTTGTGTACATTTCTTTTTATTGTTTTAAAATTCGTACAGTTTTTCATCAAGTGTGTATTCTTGATCACAGCCTTGGGTTTTCTACGAAGGCCACTTGCTATTGTTGCTGCTTCTCTCACAGCACTTAGCATTGCTTTTCTGAATGACAGGTGAGCTGATAGCCACACACTGTAGATGACAATAAATATTATTAGCCTTTCTTGTGATGGGAATGTTGTTTATTCTTTGGCCTTAAGTTTCCTTACACGGAATTAGCTATCTTTATACTTCGTGTTGTTTTCACGATTATAGTTACTTCTAAAGTTGCTCTTTTGACCTTCCTACAACTAGCATAAGGGTTTAATAAAATAGTTCATAAAAACATTTAACTAATAATATCAACAATACTTTTTGTTAATTTTCATTATTTATTTTCACAGAAGGTCTGAATATTGATATCTCTTTCCATCTTACTTTGAAATATCAATTGTTCCTCATACCTTTCCATATATTTGCAATTGGGATTTTCCTGTCCAATCATTTGTTCCTAAATGCATCAACAAATTCAAGCTTCAAAACTCTAAAAATAGTAGATGTAGCTTGTTAATAACCTCAACTTGTTAATGGACATTTTAGACTTCTTAATTACACTTGTTATCCAGAGTTGCAAGATATGCAGATACAAAATTTATGCTAATGTATTATTATTTTCTTTGTATCCTTTGATCAAGGAATCACGTGTTAGAATGTAGATAATATAGTGAGGTGCATGGATCCTTTGTTTTAATTCCAGGAGAAATTTGTTGGGACTGCCAAGTTTTTTTCATCGTTTTTTTACCACAGTTTTGCAGGCACATTCAGTGAGAAAGTAACCAGAACTGTTCGACAATTCTCTCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGTATGTATCTTCCTCAGTTTCCATGAATACAATTAGTCATCACTATAGATTCCATATTTGTTAAATAATTTTTCAGGCCTGTTATCCGTGGACGCCCATCAGCTAAAAGAGCAATATACATATGCGGACGTCCTCGATGGGTTTTTGTCTTGGTGTTCTCTTCTGGTAAAGATACTTTTTACCTATTGTCGGTGTACTTTCGCATATGAATTTAGAGGGCCCACTTCATCTATGTTTTAAGTACTGCTATTATCTTGGAGTGCATCTTTCAATCAAACTTTTTATTTTCTTTTGAATTTGATTTTTAGCATGAAATATCTTTTGTGCTCTACGTTTTCTGAGTTTTTTCCTCATCTGATGTAGTGAGTTTCATGCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGGTATGTAGGCTTTATATAAAAATCTGTTTTTTTTTTCCGTCTTATACTTTATGGTTGATTTTCTCAACCCCCCAACAAAATTTTCAGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTGTAGTCACCTTTTTCAATGTGAGTATATTCTGCCTTCGTTCTTATACGTGTCATACTGATGTCCTACCCTTTTTCTTTTGTTACTTCTAATGCATCTCCAAGGGTGCATGTTATTAATTTTATGTTGTTAATTTCTACAAGAAATTGTTCTCGGGTTTCTTGTATTGAGGGGTGATTATGGGAATTTGAACACCGGGAAGTCTAGGGTGTATTTGCTTTGTGATACAAAATCAATAAAATAAAATAAAATAAACTAGGGATTCAATGGAAAAGGAGGGGAAAAAAAAAGTTGTATTCTATGTTTTAAGTGTTTCTGAACATGTTTTTTAGGGTTGATATAGAAATTGAATCTCAATTTAAGAAGTTGGTCCAAGTGTGTTTAGCAATAGATTTATAAATGGTAAAAAAATGGTAGTTGCTAATTTTTGTATTGCTCATATGGTTAAGACATATATCCTCGACCAAAAGGTTATATGTTCAATTATCTACCCTCACATGTTGAACTCAAAAATAAAAACTATTTAGTTGAATCTTAAATACTATTAATTAATAAATAACATTTTAATGTTATAAATTTGGTAAAAAAAGTTGTAGTTCCGGACTAACTATTTAGTTGAATCTTAAATACTATTAATTAATAAATAACATTTTCATGTTATAAATTTTGTAAAATAAATGTCATAATTTATATTATGTTATACCATACGTGTTTTAATTTTCACAAAAATGAAACGGTTTTGTAGTATGGATTAGTATATTTATAAATCTTTGTTTTTGTTTTTGTTTTTTTTTTTTCCCATTTTTATTGTAATTCTGAATTTTTTAATTCCAAATGTCACAATATTTTCTATCGTTTGTATCACATAATTCAAAACTAGTTTTCTGAAAAAAAATCTACCAAACAAAGACCCAATGAACTGGAAACAAGTAATCGAATCTGAATTTTATACTATATATGCGCTCAGAGCTTTTGATCCAAACACTGTCAATTTGTAGGATGTGATATTCGTTATTATTCTCCCTTTGAAGGTTTTTATTTTTATTTTTTGAGTGATCTCTGCTCAGTAGCATGGATATCACATCTTTTTATCGACAGAAGTTTTGTGGCCATTTAAAAGAAATGGTTTCGTCTGTGCTTTTTAATTTATGGCTTCCTTTTGGTAATTATTTTTGTTAGAACTAGAATATGCTATGACCCTTGTTATCCTCTTCCTCATAGGATATAACATCTAATTGTTAGAAACCTAATGTCGATACGTTAACAAATGTTGTAGGTAAACTGTATTTGCTAATAATTGTCGTGTAGAAGATAGATGTGATAGTCTGAAATTTTGAGGCACTAAAAAGGAAGCTTGAATTCGTATTTCTGTTACCTCAATTGGTGTATTATATTTAATTGATTAAATCTAACCCACTCAAACTTCGTACTAAATTTTTCTTATAGATGTTGCGTACAACGATTCCCACCTCTCTTAGTTGGAGAATTGATCATTTATGAAGCCTTAGAAAGGCTTCTTCTAAAGAAAAAACTATCTATAAATCCCCCACCCACCCACACCCATATTTTTCACTGCTACAGTGCTACTTCAATTGTATGTGGATGAATGGCTGATAAAATTCACTTATCAAGTAAGGATTCGTCTTTAATGTATCCTCCATTGCTCTCGACTGTTATGCTTGCATATGAAATTGGTGACCTGCAGTCAGCAAATTGTGATTAAACCTGTATGTATGGCTAGACCATTCACCTGAGATGTCTCTCGTCCTGCCAATAATGTATTCTGTCGTTATGTTTTGTATGAAGTGATAACATAGCAGTATGCCAATTTGAGCATATTTCCTCAGTTAAGTATCATAGTAATAGATCAATAATGTATTTTGCCGTTTCTTCAGAGATTCGTTTGGGACTATAGTGCTTTCACTGGTTGAATAAACCTGATGTAAGCTCGCTACTACTAAGATTGATATTATTTCTGTACAGGCGTCCTCTGTTAATTATGGTGTTCATACTGTAAATCTGTGCTCCACCAGACTGCTTTGCTGCTGCCTCTGAAGAACAATATGCTGGGATGGAAAGTCTCAAGTGACGACTGCCAAAATATGCCAGATTTTGCAACTTATGTAAACTGTGGCTCCTGTTTCTGGGATGTAATTGTTTCATTTGTCATCTGTATTGTGAAGACTGAGGATAGATACAATGGAAGACTTTCAGTGAAGCAGACTGAGTTTCTTAGAATATATAGCACTCCAATGGCCCATTTAGTTATGAATTTTATTACTTTCTTATTTCTTCACGAAAAGAAAAGGAACAATTCATTTCGTGAGCGGATTGTGGTTGAATAACATGTGTGCCTTTCATGTGCCTTCCGTATCTATTTGTTAGGAGCTCTGTTCTTTTGATTGAAGCTCGGAGGCTTTTAGCTATTAAAACTCAAAACCGCTGAGGAGATTATATTTGATTGGATAGTTCCTTTGATCTCCCAGCGTATTAAGGTACAACTACAT TTTCATTTGCATCTCTTGGTGAGGAGAAACGAAAATACGCTGCGATTTCTTCCCCTCTTTTCTATTGAGGTCCAAATTTGAATTGCCTTCTCTATAGTCTCAAGAAGTTTCAGAGGCCAAAAGTTTCCTTCCTTCATTCTTTTAGGGTTTACGCTCTCATTTGCAACTCAGAATCAGATCACCTCCCCAATTTGCTAAGTTGAGATAGGCAGCCATGGATTGGGGCAACGTTACTGCTGAGGATCTGATCGATGCGCTTCGAGAGGTCGATTGGTCATCGCCTCCTCGGCCTATCTCCGAGTTCTTCGCCAGGTTCACTTTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAGTGCAATCTCTATTATTACCGAACCAACTATTTCATTATGATTGTTTTCATTCTTGCCTTGGGTTTTCTACGAAGGCCACTTGCTATTGTTGCTGCTTCTCTCACAGCACTTAGCATTGCTTTTCTGAATGACAGTTTTGCAGGCACATTCAGTGAGAAAGTAACCAGAACTGTTCGACAATTCTCTCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGCCTGTTATCCGTGGACGCCCATCAGCTAAAAGAGCAATATACATATGCGGACGTCCTCGATGGGTTTTTGTCTTGGTGTTCTCTTCTGTGAGTTTCATGCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTGTAGTCACCTTTTTCAATGCGTCCTCTGTTAATTATGGTGTTCATACTGTAAATCTGTGCTCCACCAGACTGCTTTGCTGCTGCCTCTGAAGAACAATATGCTGGGATGGAAAGTCTCAAGTGACGACTGCCAAAATATGCCAGATTTTGCAACTTATGTAAACTGTGGCTCCTGTTTCTGGGATGTAATTGTTTCATTTGTCATCTGTATTGTGAAGACTGAGGATAGATACAATGGAAGACTTTCAGTGAAGCAGACTGAGTTTCTTAGAATATATAGCACTCCAATGGCCCATTTAGTTATGAATTTTATTACTTTCTTATTTCTTCACGAAAAGAAAAGGAACAATTCATTTCGTGAGCGGATTGTGGTTGAATAACATGTGTGCCTTTCATGTGCCTTCCGTATCTATTTGTTAGGAGCTCTGTTCTTTTGATTGAAGCTCGGAGGCTTTTAGCTATTAAAACTCAAAACCGCTGAGGAGATTATATTTGATTGGATAGTTCCTTTGATCTCCCAGCGTATTAAGGTACAACTACAT ATGGATTGGGGCAACGTTACTGCTGAGGATCTGATCGATGCGCTTCGAGAGGTCGATTGGTCATCGCCTCCTCGGCCTATCTCCGAGTTCTTCGCCAGGTTCACTTTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAGTGCAATCTCTATTATTACCGAACCAACTATTTCATTATGATTGTTTTCATTCTTGCCTTGGGTTTTCTACGAAGGCCACTTGCTATTGTTGCTGCTTCTCTCACAGCACTTAGCATTGCTTTTCTGAATGACAGTTTTGCAGGCACATTCAGTGAGAAAGTAACCAGAACTGTTCGACAATTCTCTCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGCCTGTTATCCGTGGACGCCCATCAGCTAAAAGAGCAATATACATATGCGGACGTCCTCGATGGGTTTTTGTCTTGGTGTTCTCTTCTGTGAGTTTCATGCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCACGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTGTAG MDWGNVTAEDLIDALREVDWSSPPRPISEFFARFTFPRSSAKWNSRLKCNLYYYRTNYFIMIVFILALGFLRRPLAIVAASLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLVFSSVSFMLWFISCGLLTVLWSLAFGLLATLLHASFRTPNLKARLNTFREEFRAVWRNYSEL Homology
BLAST of Carg12519 vs. NCBI nr
Match: XP_022935494.1 (PRA1 family protein A1-like [Cucurbita moschata] >XP_022983443.1 PRA1 family protein A1-like [Cucurbita maxima] >XP_023528486.1 PRA1 family protein A1-like [Cucurbita pepo subsp. pepo] >KAG7017266.1 PRA1 family protein A2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 414.1 bits (1063), Expect = 7.3e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg12519 vs. NCBI nr
Match: XP_008442509.1 (PREDICTED: PRA1 family protein A1-like [Cucumis melo] >KAA0044118.1 PRA1 family protein A1-like [Cucumis melo var. makuwa]) HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109 Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg12519 vs. NCBI nr
Match: XP_022934951.1 (PRA1 family protein A1-like [Cucurbita moschata] >KAG7027936.1 PRA1 family protein A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404.4 bits (1038), Expect = 5.8e-109 Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg12519 vs. NCBI nr
Match: XP_011651881.1 (PRA1 family protein A1 [Cucumis sativus] >KGN58836.1 hypothetical protein Csa_001670 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 5.8e-109 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Carg12519 vs. NCBI nr
Match: XP_038906252.1 (PRA1 family protein A1-like [Benincasa hispida]) HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy Swiss-Prot
Match: Q9LZM7 (PRA1 family protein A1 OS=Arabidopsis thaliana OX=3702 GN=PRA1A1 PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 3.4e-88 Identity = 164/209 (78.47%), Postives = 180/209 (86.12%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy Swiss-Prot
Match: Q8GWC3 (PRA1 family protein A2 OS=Arabidopsis thaliana OX=3702 GN=PRA1A2 PE=2 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 7.4e-83 Identity = 145/209 (69.38%), Postives = 175/209 (83.73%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy Swiss-Prot
Match: Q8W115 (PRA1 family protein A3 OS=Arabidopsis thaliana OX=3702 GN=PRA1A3 PE=2 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.9e-81 Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy TrEMBL
Match: A0A6J1J7S7 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111482045 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy TrEMBL
Match: A0A6J1F5K4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442351 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy TrEMBL
Match: A0A5A7TML8 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004700 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy TrEMBL
Match: A0A1S3B6M0 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486359 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 203/209 (97.13%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg12519 vs. ExPASy TrEMBL
Match: A0A0A0LFH8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G733900 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 2.8e-109 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Carg12519 vs. TAIR 10
Match: AT5G02040.1 (prenylated RAB acceptor 1.A1 ) HSP 1 Score: 325.9 bits (834), Expect = 2.4e-89 Identity = 164/209 (78.47%), Postives = 180/209 (86.12%), Query Frame = 0
BLAST of Carg12519 vs. TAIR 10
Match: AT5G02040.2 (prenylated RAB acceptor 1.A1 ) HSP 1 Score: 325.9 bits (834), Expect = 2.4e-89 Identity = 164/209 (78.47%), Postives = 180/209 (86.12%), Query Frame = 0
BLAST of Carg12519 vs. TAIR 10
Match: AT5G05987.1 (prenylated RAB acceptor 1.A2 ) HSP 1 Score: 308.1 bits (788), Expect = 5.2e-84 Identity = 145/209 (69.38%), Postives = 175/209 (83.73%), Query Frame = 0
BLAST of Carg12519 vs. TAIR 10
Match: AT3G11397.1 (prenylated RAB acceptor 1.A3 ) HSP 1 Score: 301.6 bits (771), Expect = 4.9e-82 Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of Carg12519 vs. TAIR 10
Match: AT3G11402.2 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 301.6 bits (771), Expect = 4.9e-82 Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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