Carg12189 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12189
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	mucin-17
Location	Carg_Chr11: 2622242 .. 2623144 (-)
RNA-Seq Expression	Carg12189
Synteny	Carg12189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAGCATTTCCCAGTCTCTGCCTTCAGCCGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAGCAATGTAGATGTTGTTGAAGCAAAGAGCCAAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCATCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTTATCTCAGCCTCGCCTGACCTCTCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTCCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGTGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGGTAA

mRNA sequence

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAGCATTTCCCAGTCTCTGCCTTCAGCCGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAGCAATGTAGATGTTGTTGAAGCAAAGAGCCAAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCATCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTTATCTCAGCCTCGCCTGACCTCTCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTCCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGTGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGGTAA

Coding sequence (CDS)

ATGCAGGGAAGTTCCAAGGTGATATTGGGAGCTACACTGATAATGGTGGTGAGCCTTGCCTTTGTGTTGGGCCTTATTCTTGTGTTGCTTGCCGAGCTCTACTGCTCTCTGTTACTCCGACGCCGTAGGCTTCGTGTTGCACCGCCCACCACCACTTCCACCACCTCCTCCGCTCATCCTGTTGTAGCCGCCACCAGCATTTCCCAGTCTCTGCCTTCAGCCGCTCCCAGGGACAACAACCGACCAGCTATTTCACTTAGCAGCTTGTATGCTCATGGGGTTCTTAGTGCTCCAAGAAACTTTCTTTTCCCCTCTGTCCCCTGTATCAAAGACAGCAATGTAGATGTTGTTGAAGCAAAGAGCCAAAGCACTCAACTTCATCGAGTTATCGACATTGATGCCCATGAATCATCCCTTAGCCCTCACCGAATCGGCCTCATTTCAACTCCATCCCGCCCGCCGTCACCCTTTATCTCAGCCTCGCCTGACCTCTCTGTTTCTAAAGTTTGTGCTCAGAGTAAATTAAGCCCTGCCATTGCTTGTAATGACAGTTCTTCCATTGGCAGTGACCATTTTATGTACATTTCAAATCCGATTTATGACAATGATGCAATCAGGCCAAGCAGAGGAGACACCCCATTCGAAACACCAAATTCCTCTCCTTCAAGATTGGAAACATGTGGTTCTTCTGAAGAAGACGAGATTGTAGCTTCTCCTCCAAGTACTCTCCGTTCCCTCCCAAATACACCACCTTTAACGCCAATGAAGAAGCTCCCAGCCGAGGCTTGTTCGGTTACATTGAGAGACGCCACGTCTCTGAGGAATTCTGGAAGTGATTCTAACACTAACAATGGTCTATCATCTTCCTCCTCTGGTTCTCCCTGTACTTCACCTTCATGGTAA

Protein sequence

MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHPVVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAKSQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW

Homology

[Close]

BLAST of Carg12189 vs. NCBI nr
Match: KAG7021842.1 (hypothetical protein SDJN02_15570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 554.3 bits (1427), Expect = 6.5e-154
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK
Sbjct: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. NCBI nr
Match: KAG6587952.1 (hypothetical protein SDJN03_16517, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.1 bits (1424), Expect = 1.4e-153
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. NCBI nr
Match: XP_022931558.1 (uncharacterized protein LOC111437716 [Cucurbita moschata])

HSP 1 Score: 550.4 bits (1417), Expect = 9.4e-153
Identity = 297/300 (99.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. NCBI nr
Match: XP_023004116.1 (uncharacterized protein LOC111497542 [Cucurbita maxima])

HSP 1 Score: 545.0 bits (1403), Expect = 3.9e-151
Identity = 294/300 (98.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRR RLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRCRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDND IRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDGIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. NCBI nr
Match: XP_023530777.1 (uncharacterized protein LOC111793226 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 537.3 bits (1383), Expect = 8.2e-149
Identity = 292/300 (97.33%), Postives = 296/300 (98.67%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPP   STTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPP---STTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPP PFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPPPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 297

[Close]

BLAST of Carg12189 vs. ExPASy TrEMBL
Match: A0A6J1EZ13 (uncharacterized protein LOC111437716 OS=Cucurbita moschata OX=3662 GN=LOC111437716 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.5e-153
Identity = 297/300 (99.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. ExPASy TrEMBL
Match: A0A6J1KR73 (uncharacterized protein LOC111497542 OS=Cucurbita maxima OX=3661 GN=LOC111497542 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151
Identity = 294/300 (98.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRR RLRVAPPTTTSTTSSAHP
Sbjct: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRCRLRVAPPTTTSTTSSAHP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAK 120
           VVAAT+ISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKD+NVDVVEAK
Sbjct: 61  VVAATNISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDNNVDVVEAK 120

Query: 121 SQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180
           S+STQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA
Sbjct: 121 SRSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSPAIA 180

Query: 181 CNDSSSIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240
           CNDSSSIGSDHFMYISNPIYDND IRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP
Sbjct: 181 CNDSSSIGSDHFMYISNPIYDNDGIRPSRGDTPFETPNSSPSRLETCGSSEEDEIVASPP 240

Query: 241 STLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300
           ST+RSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW
Sbjct: 241 STIRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSPSW 300

[Close]

BLAST of Carg12189 vs. ExPASy TrEMBL
Match: A0A5A7TU56 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001330 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126
Identity = 259/304 (85.20%), Postives = 273/304 (89.80%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVV--- 120
           V  AT+ISQSLPSA   DNNR AISLSSLYAHGVLSAPRNFLFP+VPC+KD+NVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKSQ++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of Carg12189 vs. ExPASy TrEMBL
Match: A0A1S3CJ56 (uncharacterized protein LOC103501549 OS=Cucumis melo OX=3656 GN=LOC103501549 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126
Identity = 259/304 (85.20%), Postives = 273/304 (89.80%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVV--- 120
           V  AT+ISQSLPSA   DNNR AISLSSLYAHGVLSAPRNFLFP+VPC+KD+NVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNFLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKSQ++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of Carg12189 vs. ExPASy TrEMBL
Match: A0A5D3BN01 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00580 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.7e-126
Identity = 258/304 (84.87%), Postives = 273/304 (89.80%), Query Frame = 0


Query: 1   MQGSSKVILGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHP 60
           MQG+SKVILGATLIMVVSLA VLGLILVLLAELYCSLLLRRRRLRVAPPTTTS+  S  P
Sbjct: 1   MQGTSKVILGATLIMVVSLAIVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSSNLSGDP 60

Query: 61  VVAATSISQSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVV--- 120
           V  AT+ISQSLPSA   DNNR AISLSSLYAHGVLSAPRN+LFP+VPC+KD+NVD V   
Sbjct: 61  VATATNISQSLPSAPRGDNNRSAISLSSLYAHGVLSAPRNYLFPTVPCVKDNNVDDVAEP 120

Query: 121 EAKSQSTQLHRVIDIDAHESSLSPHRIGLISTPSRPPSPFISASPDLSVSKVCAQSKLSP 180
           EAKSQ++QLHR+IDID  ESSLSP RIGLISTPS P SP ISASPD+S+ K CAQSKLSP
Sbjct: 121 EAKSQNSQLHRIIDIDTLESSLSPRRIGLISTPSLPSSPIISASPDVSILKACAQSKLSP 180

Query: 181 AIACNDSSSIGSDHFMYISNPIYDNDAIRPSRGD-TPFETPNSSPSRLETCGSSEEDEIV 240
           AIACNDSSS GSDHFMYISNPIYDNDAIRPSRGD TPFETP+SSPSRLE C SSEEDEIV
Sbjct: 181 AIACNDSSSNGSDHFMYISNPIYDNDAIRPSRGDNTPFETPSSSPSRLERCSSSEEDEIV 240

Query: 241 ASPPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCT 300
           ASP ST+ SLPNTPPLTPMKKLPAEACSVTLRDA SL NSGSDSNT+NGLSSSSSGSPCT
Sbjct: 241 ASPSSTIHSLPNTPPLTPMKKLPAEACSVTLRDARSLGNSGSDSNTHNGLSSSSSGSPCT 300

[Close]

BLAST of Carg12189 vs. TAIR 10
Match: AT3G29300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to 349 proteins in 91 species: Archae - 0; Bacteria - 85; Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 5.7e-23
Identity = 112/302 (37.09%), Postives = 144/302 (47.68%), Query Frame = 0


Query: 9   LGATLIMVVSLAFVLGLILVLLAELYCSLLLRRRRLRVAPPTTTSTTSSAHPVVAATSIS 68
           + ATL+MVVSL  VL L+LVLLAELYCSLLLRRRR        T+T S+A      T+++
Sbjct: 1   MAATLVMVVSLVMVLSLVLVLLAELYCSLLLRRRRHNSLNLPITTTVSTA--ARTTTTLN 60

Query: 69  QSLPSAAPRDNNRPAISLSSLYAHGVLSAPRNFLFPSVPCIKDSNVDVVEAKSQSTQLHR 128
           Q++ S    DN  P                             SN+              
Sbjct: 61  QAI-STTSNDNTSP-----------------------------SNI-------------- 120

Query: 129 VIDIDAHESSLSPHRIGLISTPSRP---PSPFISASPDLSVSKVCAQSKLSPAIACNDSS 188
                 + SS +P   G+I TP++      P++ AS DL    +            NDS 
Sbjct: 121 ------NSSSPNPLYTGVIQTPTKTHYNHEPYLQASLDLIQETI-----------VNDS- 180

Query: 189 SIGSDHFMYISNPIYDNDAIRPSRGDTPFETPNSSPSRLET-------CGSSEEDEIVAS 248
               D+F+YISNP+Y NDA   S+  TPFETP SSPSRLET        G  + D I+  
Sbjct: 181 ---VDNFIYISNPMYSNDA--TSKPTTPFETPESSPSRLETGESSSSSSGEEDNDHIIE- 213

Query: 249 PPSTLRSLPNTPPLTPMKKLPAEACSVTLRDATSLRNSGSDSNTNNGLSSSSSGSPCTSP 301
                    +TP LTPMK LP +ACSV+L+   ++  S S+SN        SSGSP TSP
Sbjct: 241 --------VSTPTLTPMKDLPEKACSVSLK---NVETSASESN--------SSGSPYTSP 213

The following BLAST results are available for this feature:

BLAST of Carg12189 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021842.1	6.5e-154	100.00	hypothetical protein SDJN02_15570, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587952.1	1.4e-153	99.67	hypothetical protein SDJN03_16517, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022931558.1	9.4e-153	99.00	uncharacterized protein LOC111437716 [Cucurbita moschata]	[more]
XP_023004116.1	3.9e-151	98.00	uncharacterized protein LOC111497542 [Cucurbita maxima]	[more]
XP_023530777.1	8.2e-149	97.33	uncharacterized protein LOC111793226 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12189 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ13	4.5e-153	99.00	uncharacterized protein LOC111437716 OS=Cucurbita moschata OX=3662 GN=LOC1114377...	[more]
A0A6J1KR73	1.9e-151	98.00	uncharacterized protein LOC111497542 OS=Cucurbita maxima OX=3661 GN=LOC111497542...	[more]
A0A5A7TU56	2.1e-126	85.20	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3CJ56	2.1e-126	85.20	uncharacterized protein LOC103501549 OS=Cucumis melo OX=3656 GN=LOC103501549 PE=...	[more]
A0A5D3BN01	4.7e-126	84.87	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Carg12189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29300.1	5.7e-23	37.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12189-RA	Carg12189-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane