Carg12145 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTTTATTCCTGTTTTTTCTCCGATGGGCAGAGAAGGGTAAGGTAAAAAGGGAAGGGAAAGTAAAAGTTAGGAGGTTTTCTTTCTAGATTTTCAAGTTCAGATTCATTCAGGAAAGATATTCTTGCGAGAAAAGAAAAGAAAAAAAAAATTGAAGATGGGAGCAGAGAGCACCTCGGAAACGACCCCCGTAAGTGGAGATTGGAACGAGAAATACGAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCTTATTGGTTTGGTTTTGGGATTTTTCATTCGGGTATTGAAGGTGATTTTCGTATCTGCTTCTGCCCTCTCCCCCTTTTCTTATCTTCCTGATTTTGTTTGGTGTTTGGTGCATTCTTTATGTTTGTTAAAATGCATCTGATGCTCTGAAGAAAGATTGTTCAAACCCTTCCTCCTTTTCTTTTGGAATTTCTTCAAGTATTTGGTCTACAATGGAACTGAATCAAAACTACATGAGATTGATTTTAAACATCTTGTGTTGATGAATGAACTCCGAATCATCTTCCATTGTCTGGATTGGTTGATCTGAAGCTGGTTCTGGATGTGTGGAACGTTTTCAACGAGGTGTTGCAAAATCTTTTCTTGTAGTTGCCATTGAAATATCCGAATCATCAGGGTCGGCGAAATCAGATTTTGTAATGTGGGTTGTTCTTAGAATCTTCGAACTGTTGTAGATCTTGTTTTCTTCTCTGATTAGCCATTGAATATTTGGAGAGAAATAGAATCTCTTAAGTTCTGTGTGTTTGTGTTTGTGTTTGTGTTTATGTTTGTTTTAGAGATAAGAGAGGGTTTGGTGTGATCTCATCATGTTTCTAAGATTGAAGCATTTTTGGATCAAAAGAAAGGCTTCCAACTGATGTAAAACTTAACTTATGTATGAAAATTCTTGATTATAAGTCAGAATTTTCAAGTCAATGTTATGGCTATTGTGAACCTAACGTGTGAATTCATTTAAGTGTGTTTGGTGTTGCTCACAGTCCACGGTAAAGAGTATGGGTTTGGAGCTCACGACTTCCCTGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCGGGTTTTATATACCGATGTTCTGTCACGTTGGGAAAACTTGATATGCCTCCCTCTGAATTTAGAACGTTCATTGAAACTGTTGCCTCTGAATATCATGGAGATACATATCATCTTATTTCCAAAAACTGTAATCATTTTACTGATGATGTCTCCAGCAGATTGACTGGGAAACGGATACCTGGATGGATCAATCGGCTCGCTCGGATGGGTAGCAGTTTTATCCCTTGAGCTCTCTTTGATTTCTTCCCAGCACACCATTTTTCACTTCCTTTGCATTCATCTTTTCATTGAATTCCTCTTGCCATTATGTTGATGCCATTGAAACCTATATACTGCTCCTTTTCTAAGAAAACTTGAATAGAAACTTCGTTTTTTGCATACTTGTCTGCTTGAATTGATTTTCCTTCCAAATATGTAAAAGAAAAGTGATGATGGTTTGTTCCTTAATTGTTCCATCCTCAGTCATTACTATGATGCAAATAAAAGAAGGAATGATGATAGTTTACTGTTGTAACTTCACTCGAACACGTTTGATGGGCATGGATGTCGCCCGTTTGACATCGAACTCGGTCTCTGCATGCATTTGCAAGCGTAAAAGTGAATTCTGCTAACTTACTCTAGTGAAAACTTCAGGTGCTTTGTGCAGTTGTTTGCTACCTGAAAGTCTTCAAGTAACTACTGTGAAACAACTGCCCGAATACCACGAATACTCAGGTTTGTGGTCTTTTACTTGAATGTTTTATTTTTCCTCCTTGGGTTGATCTAGAACTTGTGGTCTGATGCAATACGTATGTAGTTAAAAACTTGAATCCAACGAAGTATGCTGTTATAAGCATTACCATTTGGGGTTTGTTTCCTCCAGAGGAAGAATGTACGACCGGGTCTCCACGGCTCGACACTCGACTGGTCTTGGCAGAAATTGTGGAAGATGAAGATAAGCGGCTGCTGACAGTATCAACTGGAATCACAGATGTTGCTTTCGTCCCAGAATCTCACAAGTGAAAGAGAGCAGAGAGGCAGGTGTCTTCTATTGCTTGCAAATCGCATCTCCCATGCCCGCGCCTAATGATCTTGTCTCCATTGCAAAAGTAAGAACTGTTTGGCTTCTTTGTATTAAATGTTTGGGAGTAGAATTGTTTTTATTCCGTAGATAGTGGTACTTCGGCTTTAATTGGCCCAAAGAGACATAGAGATCACTTTGAATGTTGTTTTGCTTCCATATCCTTTGAAATGATCGCAGTATTGCCTCGATTTGCAGAACAACTCTCAGTTTCAATGTTATATTATGAGTTAAGTTACATATTTGATCTCTGATACATTCTT TTCTTTTATTCCTGTTTTTTCTCCGATGGGCAGAGAAGGGTAAGGTAAAAAGGGAAGGGAAAGTAAAAGTTAGGAGGTTTTCTTTCTAGATTTTCAAGTTCAGATTCATTCAGGAAAGATATTCTTGCGAGAAAAGAAAAGAAAAAAAAAATTGAAGATGGGAGCAGAGAGCACCTCGGAAACGACCCCCGTAAGTGGAGATTGGAACGAGAAATACGAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCTTATTGGTTTGGTTTTGGGATTTTTCATTCGGGTATTGAAGTCCACGGTAAAGAGTATGGGTTTGGAGCTCACGACTTCCCTGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCGGGTTTTATATACCGATGTTCTGTCACGTTGGGAAAACTTGATATGCCTCCCTCTGAATTTAGAACGTTCATTGAAACTGTTGCCTCTGAATATCATGGAGATACATATCATCTTATTTCCAAAAACTGTAATCATTTTACTGATGATGTCTCCAGCAGATTGACTGGGAAACGGATACCTGGATGGATCAATCGGCTCGCTCGGATGGGTGCTTTGTGCAGTTGTTTGCTACCTGAAAGTCTTCAAGTAACTACTGTGAAACAACTGCCCGAATACCACGAATACTCAGAGGAAGAATGTACGACCGGGTCTCCACGGCTCGACACTCGACTGGTCTTGGCAGAAATTGTGGAAGATGAAGATAAGCGGCTGCTGACAGTATCAACTGGAATCACAGATGTTGCTTTCGTCCCAGAATCTCACAAGTGAAAGAGAGCAGAGAGGCAGGTGTCTTCTATTGCTTGCAAATCGCATCTCCCATGCCCGCGCCTAATGATCTTGTCTCCATTGCAAAAGTAAGAACTGTTTGGCTTCTTTGTATTAAATGTTTGGGAGTAGAATTGTTTTTATTCCGTAGATAGTGGTACTTCGGCTTTAATTGGCCCAAAGAGACATAGAGATCACTTTGAATGTTGTTTTGCTTCCATATCCTTTGAAATGATCGCAGTATTGCCTCGATTTGCAGAACAACTCTCAGTTTCAATGTTATATTATGAGTTAAGTTACATATTTGATCTCTGATACATTCTT ATGGGAGCAGAGAGCACCTCGGAAACGACCCCCGTAAGTGGAGATTGGAACGAGAAATACGAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCTTATTGGTTTGGTTTTGGGATTTTTCATTCGGGTATTGAAGTCCACGGTAAAGAGTATGGGTTTGGAGCTCACGACTTCCCTGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCGGGTTTTATATACCGATGTTCTGTCACGTTGGGAAAACTTGATATGCCTCCCTCTGAATTTAGAACGTTCATTGAAACTGTTGCCTCTGAATATCATGGAGATACATATCATCTTATTTCCAAAAACTGTAATCATTTTACTGATGATGTCTCCAGCAGATTGACTGGGAAACGGATACCTGGATGGATCAATCGGCTCGCTCGGATGGGTGCTTTGTGCAGTTGTTTGCTACCTGAAAGTCTTCAAGTAACTACTGTGAAACAACTGCCCGAATACCACGAATACTCAGAGGAAGAATGTACGACCGGGTCTCCACGGCTCGACACTCGACTGGTCTTGGCAGAAATTGTGGAAGATGAAGATAAGCGGCTGCTGACAGTATCAACTGGAATCACAGATGTTGCTTTCGTCCCAGAATCTCACAAGTGA MGAESTSETTPVSGDWNEKYETQVVLNVYDLTPANNYSYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRSCPGFIYRCSVTLGKLDMPPSEFRTFIETVASEYHGDTYHLISKNCNHFTDDVSSRLTGKRIPGWINRLARMGALCSCLLPESLQVTTVKQLPEYHEYSEEECTTGSPRLDTRLVLAEIVEDEDKRLLTVSTGITDVAFVPESHK Homology
BLAST of Carg12145 vs. NCBI nr
Match: KAG7021799.1 (DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 461.5 bits (1186), Expect = 4.2e-126 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of Carg12145 vs. NCBI nr
Match: KAG6587913.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 459.1 bits (1180), Expect = 2.1e-125 Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Carg12145 vs. NCBI nr
Match: XP_022931676.1 (deSI-like protein At4g17486 isoform X2 [Cucurbita moschata] >XP_023004226.1 deSI-like protein At4g17486 isoform X2 [Cucurbita maxima]) HSP 1 Score: 456.8 bits (1174), Expect = 1.0e-124 Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg12145 vs. NCBI nr
Match: XP_023530537.1 (deSI-like protein At4g17486 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.4 bits (1173), Expect = 1.3e-124 Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg12145 vs. NCBI nr
Match: XP_022931671.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita moschata] >XP_023004216.1 deSI-like protein At4g17486 isoform X1 [Cucurbita maxima]) HSP 1 Score: 444.1 bits (1141), Expect = 6.9e-121 Identity = 218/242 (90.08%), Postives = 218/242 (90.08%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60 Identity = 103/156 (66.03%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.8e-30 Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy Swiss-Prot
Match: A3QRX8 (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.8e-30 Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy Swiss-Prot
Match: Q5R456 (Deubiquitinase DESI2 OS=Pongo abelii OX=9601 GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.8e-30 Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy Swiss-Prot
Match: Q9D291 (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-29 Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy TrEMBL
Match: A0A6J1KRJ2 (deSI-like protein At4g17486 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497613 PE=3 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 5.0e-125 Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy TrEMBL
Match: A0A6J1EUB3 (deSI-like protein At4g17486 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437807 PE=3 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 5.0e-125 Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy TrEMBL
Match: A0A6J1KRI1 (deSI-like protein At4g17486 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497613 PE=3 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121 Identity = 218/242 (90.08%), Postives = 218/242 (90.08%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy TrEMBL
Match: A0A6J1EUA9 (deSI-like protein At4g17486 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437807 PE=3 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 3.4e-121 Identity = 218/242 (90.08%), Postives = 218/242 (90.08%), Query Frame = 0
BLAST of Carg12145 vs. ExPASy TrEMBL
Match: A0A5D3CSX0 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00370 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.5e-110 Identity = 190/219 (86.76%), Postives = 205/219 (93.61%), Query Frame = 0
BLAST of Carg12145 vs. TAIR 10
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 234.6 bits (597), Expect = 7.8e-62 Identity = 103/156 (66.03%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of Carg12145 vs. TAIR 10
Match: AT5G47310.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60 Identity = 111/197 (56.35%), Postives = 145/197 (73.60%), Query Frame = 0
BLAST of Carg12145 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 204.5 bits (519), Expect = 8.6e-53 Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 0
BLAST of Carg12145 vs. TAIR 10
Match: AT1G47740.2 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 204.5 bits (519), Expect = 8.6e-53 Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 0
BLAST of Carg12145 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 201.8 bits (512), Expect = 5.6e-52 Identity = 87/161 (54.04%), Postives = 113/161 (70.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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