Carg12107 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATCTTCGTTCGGAGAGCCTTTCAATCGCGCTCATTATCGCCATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGGTTACTCTTCAAATCCCTTTTGGCTTCATCTTTTGGTTCTAGGTTTTGATGATTTTTGCGTTTCGTGTTGATGCGTTCTTATGTGGGTTGTTGTAGAGCAGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGGTTCGTTTCGTTGCGATTTTCTTCTTTTTCTTATCGTTTTTAGCGTGCATTTATGCCATTATCAGTGTTTTTCTTTTCTTTTTCTTTTCTTGTTGTGATTTAGCTTCTCTATTTAGTAATGGAGTTTCGCGCATAGGGGTTTTGTTGTTTTCTGGTAATTTAGATGGTTAATGCGTGAAAACATAAATCTTCTCCTTGGATGTTACTTCACAGTTTTATTTACCATTGACTGTTATGACGAACTCTTAGGGTTTATTATGGCCCCTTTCGTTACGAATTTGAATTATGTTTTATATTTTTTTGAAAACTGTTTTGGGATTCTTTGATTCAAATTGTGAATATTCTAAAATTTTTTTAACGTTTTCAATGTAGAATTTGGAATCTTAAAATGAAGAATTATATACTATTATAGTCTGATGATTAGTTTTAATTTGGTACTTTTAGGTGTTTTTTTTTTTTTTTTTTTTTTTGGATGCCAATTCAATGCCTCCAAGAAATGGGTTGAGTAAATGTTCTTTGAAAGTCGTTTTTCTTATTTCGGTTAGTGTTTTCTTTACTATTTTGGAAAATTTTCTTTCTTTAATTATCATGGACTTGTGGTTAGTGTTCTTATGTGCAAAGTAATCTTAATTTTTACAAATTACTCGACAATTCTGAAGAATAATCTTCTTTTCACAAAAAAAGAAAAAGAAACACTGACCCCAAGTTTCAAGATGTGATTGATACTAACAAAACAAATACTAGTGGCTAGCTAAAGAAGAAAATTTTGTTGCCATTGATGTCTTCATAATCATTTTCGAGCATTTATTGATAGTTTATACTATTGTTGTACAATGAATAAACTGTTCTAGAATTATATATCTTATGTTTTAAGTGATCTGGACTGTTCATTCATTCCTATCTATTGATTTTTTTTTCTTTTTTCTATTGCCAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGTACGTTACTAAGCCACCCCCTCCCTTCGAAGAATGTGGGGCTTTTTTAAATGATTTTTCAAGTGTTTGATACCATGGATGGTTCCATCTTGTGCATTTGATACCATGGATGGTTCCATCTTGTGCATTTGAGACCATGGATGGTTCCATCTTGTGCGTAATTTTTCCATTCTATGTTTTGATAAAGTTCACTTGCATTACATGTTGTATTTTACTATGCTGTTATCATGTATGGATTGCGGGCTCAAGATATCCATATTCACATGGTGCAGGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATGTAGGTTGGATCATGATGTAAATCTTAAGTGGCTTGTTTATTAAACTAGAAGTTTTGGATGTTCGCATTCAACTACTGCGTTTTGTTTTGTGCGCTGACTTTTCAGATTGGGATTATAATGTTTGAGTTGTTGATTTTCAGCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGAGTAAGTACTGTCCTCATTCCTCTTTCTGGATCTAATGCTCTGTTTATTTTCAAAGAATGAACGACTGCGTTGTGTTATATGTTCTTATGTGCATCCTATCCTGTTTATGCTTGGTTTTAAGCAATTTTGAGTTGGAAAATGAGCTGACAATGTGATCCATCAGTTTTATTCCTCTTGCTATGAGTTCATTCTTAACTTCATGTTTCAAAAAAAAACTTTGCAAGGAATTGGTCAATGCCAGCAGCTTTATGCTCAATTTCTTAAGCTTTTTTAGGAATTCCAAAACAAACAACTTCAACATAATCTTTCTGTAACACCGATCCAAGCCCACCACTAGCAGATATTGTCTTCTTTGGGCTTTCCCTCAAGATTTTTAAAACGTCTATGTTAGGGAGTGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCCCCCAACCGATATGGGATCTCACAATCCACCCTCTTTCAAGGCTCAGTGTCCTTGTTGACAATTGTTCCCTTTTCCAATCAATGTGGGACCCCCAATCCACCCCCTTTGGGACCCGGCGTCCTTACTGGTACACTGCCTTGTGTCTACCTTCTTTCGAGGCTCAGCATCTTCCTCGCACATCTGCTTCCCTTAAGGTTTTTAAAGAATGTTTCCTTTCGAGGCTCAGCATTTGTAACGGCCCAAGTCCACCGCTTCCCTTAATCTTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCATTCCACACCCTTACAAAGAATGCTTTATTCTCCTTCCCAACCTTCATCTTGTGATATTTTGAGAAGGTACTGTGGAAATAATTCATGTCTAACCTCATGAAGATTTCTTTCCAGATAGTCATTCGTTACTTCATTCTCTCCCTATGTGATTGTACTTTGGCATGATATTCCTTCAAGTTGTATGCTTACAATATTAGGGGATGTTGTACTTTCTTTTTCGATTCGTACTCTGCTCTTCCAGCTCCTATTTGCTCTTTCTCGACTGTTTTAGGGAAGTTTTTTTTTAATATACTTCGGGCACGTTTGGGAATGATTTTGAAACGGCGACAAATCACTTTTGTCATGTCTTTTAGTTATTTTGGGCTGTCTTAAAATCACTCCGAACATATCCTTATGGAATTCTAACGTGTGCTGTTAACCATTTTGGTATGAATGTGTATTCCAGCTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAGTGCCAAATTTAGCAATGCTTCCTTGCATTCTCAGCGTTAGGTAATGAAATCTTCTTTCTCCACCTAAAATAATAATAACTTCGAAGATCTACCCCTTGATCTTTTGTGCTTTTCTAGAGTTTGATTTTCAAGAAATTCATTTTCCATGTAATTTCATTTTTATGTTGATTAGGAAGTTGTATTTGCAATGCATAAAACAGATCAGTGCCATTATTTGTATGTTATTTGTTTTCGGTAACATTCTATACTCTAATAAATTTAGAGTTAAAAAGACAGCCACTCACCTTGTTGAGCGTTTAGGTATATATATTCCTTATTATGAGGTCAAAGTTTCGAATCTTTTCACGAAACCTTATTTTATAAGTAATATTTTGATTACTATATTCTTTTTAGAAGTAAAACATTATACTTCATCTTCATCAGTCTCATTTATTTGGATAACTAGAGGTTTTCAAGGAGTTGAGTTGGCATATA TCAAATCTTCGTTCGGAGAGCCTTTCAATCGCGCTCATTATCGCCATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGACTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAGTGCCAAATTTAGCAATGCTTCCTTGCATTCTCAGCGTTAGGTAATGAAATCTTCTTTCTCCACCTAAAATAATAATAACTTCGAAGATCTACCCCTTGATCTTTTGTGCTTTTCTAGAGTTTGATTTTCAAGAAATTCATTTTCCATGTAATTTCATTTTTATGTTGATTAGGAAGTTGTATTTGCAATGCATAAAACAGATCAGTGCCATTATTTGTATGTTATTTGTTTTCGGTAACATTCTATACTCTAATAAATTTAGAGTTAAAAAGACAGCCACTCACCTTGTTGAGCGTTTAGGTATATATATTCCTTATTATGAGGTCAAAGTTTCGAATCTTTTCACGAAACCTTATTTTATAAGTAATATTTTGATTACTATATTCTTTTTAGAAGTAAAACATTATACTTCATCTTCATCAGTCTCATTTATTTGGATAACTAGAGGTTTTCAAGGAGTTGAGTTGGCATATA ATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGACTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAG MGVFFHSSDFLLPSSTSSPAGHPPSSTYALVLLNQSLPKFTPLLWKHAKLRLCADGGANRVFDELPLLFPHQDATDIRNSYKPDVIRGDMDSIRTEVLDFYAKQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESNLCILVAGALGGRFDHEMGNINVLCRFSTTRIILLSDDCLIHLLPRTHHHEIHVHSSVEGPHCGLIPIGMPSGRTTTTGLQWDLTDTEMKFGGLVSTSNIVKGEKVTVQSDSDLLWTLSLKGNETRHSST Homology
BLAST of Carg12107 vs. NCBI nr
Match: KAG7030224.1 (Thiamine pyrophosphokinase 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 550.4 bits (1417), Expect = 8.3e-153 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: KAG6593191.1 (Thiamine pyrophosphokinase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 544.3 bits (1401), Expect = 6.0e-151 Identity = 266/268 (99.25%), Postives = 267/268 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_023515266.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.9 bits (1400), Expect = 7.8e-151 Identity = 262/267 (98.13%), Postives = 266/267 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_022960072.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149 Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_023004625.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 535.4 bits (1378), Expect = 2.8e-148 Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy Swiss-Prot
Match: B9DGU7 (Thiamine pyrophosphokinase 1 OS=Arabidopsis thaliana OX=3702 GN=TPK1 PE=2 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.0e-105 Identity = 182/258 (70.54%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy Swiss-Prot
Match: F4IV16 (Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana OX=3702 GN=TPK2 PE=2 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.7e-103 Identity = 178/258 (68.99%), Postives = 210/258 (81.40%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy Swiss-Prot
Match: Q5JK24 (Thiamine pyrophosphokinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK1 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 8.2e-95 Identity = 168/258 (65.12%), Postives = 202/258 (78.29%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy Swiss-Prot
Match: Q60DX1 (Thiamine pyrophosphokinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK3 PE=2 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.6e-93 Identity = 165/256 (64.45%), Postives = 199/256 (77.73%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy Swiss-Prot
Match: Q0JMW0 (Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK2 PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 4.2e-91 Identity = 160/258 (62.02%), Postives = 200/258 (77.52%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy TrEMBL
Match: A0A6J1H6C2 (Thiamine pyrophosphokinase OS=Cucurbita moschata OX=3662 GN=LOC111460928 PE=3 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 5.4e-150 Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy TrEMBL
Match: A0A6J1KV43 (Thiamine pyrophosphokinase OS=Cucurbita maxima OX=3661 GN=LOC111497866 PE=3 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.3e-148 Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy TrEMBL
Match: A0A1S3BSZ4 (Thiamine pyrophosphokinase OS=Cucumis melo OX=3656 GN=LOC103492826 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.3e-131 Identity = 232/258 (89.92%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy TrEMBL
Match: A0A6J1GPJ2 (Thiamine pyrophosphokinase OS=Cucurbita moschata OX=3662 GN=LOC111455967 PE=3 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129 Identity = 227/258 (87.98%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Carg12107 vs. ExPASy TrEMBL
Match: A0A6J1D8K1 (Thiamine pyrophosphokinase OS=Momordica charantia OX=3673 GN=LOC111017915 PE=3 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.9e-129 Identity = 231/267 (86.52%), Postives = 245/267 (91.76%), Query Frame = 0
BLAST of Carg12107 vs. TAIR 10
Match: AT1G02880.2 (thiamin pyrophosphokinase1 ) HSP 1 Score: 382.9 bits (982), Expect = 2.1e-106 Identity = 182/258 (70.54%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Carg12107 vs. TAIR 10
Match: AT1G02880.3 (thiamin pyrophosphokinase1 ) HSP 1 Score: 382.9 bits (982), Expect = 2.1e-106 Identity = 182/258 (70.54%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Carg12107 vs. TAIR 10
Match: AT2G44750.2 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 377.1 bits (967), Expect = 1.2e-104 Identity = 178/258 (68.99%), Postives = 210/258 (81.40%), Query Frame = 0
BLAST of Carg12107 vs. TAIR 10
Match: AT2G44750.1 (thiamin pyrophosphokinase 2 ) HSP 1 Score: 371.7 bits (953), Expect = 4.9e-103 Identity = 177/258 (68.60%), Postives = 209/258 (81.01%), Query Frame = 0
BLAST of Carg12107 vs. TAIR 10
Match: AT1G02880.1 (thiamin pyrophosphokinase1 ) HSP 1 Score: 279.6 bits (714), Expect = 2.6e-75 Identity = 130/178 (73.03%), Postives = 151/178 (84.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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