Carg12078 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12078
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin-like domain-containing protein
Location	Carg_Chr05: 9747899 .. 9753329 (+)
RNA-Seq Expression	Carg12078
Synteny	Carg12078

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGGATTGCAGACTCGGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTACGGAAACCTTTCTTCTTCTTCTTCTTCTTCTTCTTCGATATTGATTGATTTTGTTTCATCAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGGTATAATTGCGGTATTCTGCTGATTGCGGGATATTTCATTCTGTTGTTTGTATCACGGTCGTCTGAAATACTATATGTAGTCTAGGTTTATACTTTCTCTATTGCTTTTCCGTATACACCGCCCTTTTCATGGTGATGCTGGCCCCTTTGATGACTATACATGCTTCAGCTTTCAAAATGTCGTTGTGATGCATGTTTCTCCATATTACACATTTCTTGCTTCGATCTTCTAGGTTCTGGACTATCATTTTTCATATGCTAGTACCTGCTTGGATTCTAGTTACAAATAAAAGCAAGAAAATGTCCCACCGCTGAAAATTGAATCATGATTCTTGCTTATTGATCTTGTTTTTTTTTTTTTTTTTTTTTTTTTCTAATCGACCTGTCTTGTGTTGTTCGTGGTACTTTGGCTTCTTGTTGCACAGTATCTGTTTCTTTGTTGTTCTGCATGCTTTCTATACTGTTCTGAATGGTTTGAGTTTCTATGGGCTTATCATTTGACAATTCAGTTTGAAATCAGTAATTGGATGCCTCCGTTTCTTGTGTAGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGGTATGAACCATTAAGTATTTCAATTGTTGTTCTTAGACAGGAAGCTTAGCTTGAAGCTGTTCTCAATTATCTGTTTCGCATCAATGGTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGGTAATAATCATATGCTAAATTATGCCAAGAAGTTCTATGTACGAATTTTCTAATTTCATTTTGGTTCTTTGTTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATGTAAGTAATAATGTTCTGTTAGTTACTAGATTTTGAATTTTGGTGCCATTATTTTCGGTAGTTATTTTATGGCAACCTTAGGAGCTGTTTCTTAAACAGTTGTGCAAATCAGTTTTTCAAAAATATTTTTAGTATTGCAACATAATTAACAAGTGTCTTAGAATATGGTTTCACTGTGTTTGATCATTGTTATCCAATTGTGTGGTCTGAGAAAACCAATTTCAATTGTTCTTAAAAAATCAACACATTTTGCAGATAATAAAGCAAGAGAAAACAATTTTTAGCACACAATTACTTCAAAATGTTATCAAATTAGAGTATTTGGTGCGGAAAATTACTGTTTTTCAATTTGACTCTCGTAAATCCTCTCATTTTTTTGAGTAGTGTCTCTCTCAGCACGTGACAATTTCTATTCTCCATATACTTTTTTGAAGCTGAAGTACCTTATTCTAGTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATGTTTGAGTATTTTTTGCAGATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGGTAAGTAGTATTTGAGAGAAACTCTCATCCCATTCATGTCCAGCTGAGTTGTAGGACTTTTGTATGCTTTAGATAAACTAAGTCAAGGCATGATTGTGTGTTTATACATTCTCCGATCTCATGGCTTGTCCAGTTGTTTGTTCTTAAATGTGTTAGGTCCCTATACATTTGTGGAAAAGGAAAAGTACGCGGTTAAAGGGTAACAATAAGAATGGGTGACGATGCAAATTGATTAGTAGAGGTGGGAATTAGAAAGAATAAGAACCTAGGAAGCTGGTGAGAACTATAGCATAATGAAATACTTATAGCTAGGGGTGTCAAAAGAGAAGATGTTATTCTTTAGGTGGTGCTCGGAAGTCTCAATTTCTCCCTCTTGTTTGTGCAACTTTCCACTATTTTTTCAATTACATATCTACTGAGTAGTGGTACTCGAACAATCGGTTCCTAGGACTTGATGGTTGCAAATAGGAAAATAGAGAATCGCTTGGAAGCAATTGAGGAGAAGTTACTATAATGTTTAAATAGACTTGTCGGTAATGCATTGGGCAGGGGATGCAGGAAATGCCCAAGGAGATGAGCCATTTGATGGAATACTATATGGAAAATATAATGAATATTGAGTTTGGGGCTAATCTTGTGCCAACCTCAGAAAATAAGGATAAGGTTCCAATCATACAAGCAAAGTATGGCATCAATTAAGTGCTAGATTAAGGAAGGGGGAAGGCTTCGATAGGATCATCATCTAGACCAAGGGGGAAGGGCATCATAGAGAACTAATGAGGATCCAAAGTGGAGATTTGAAATGGAAATTTCTAGTGACCCGCTGTGGCCTGCTAACCTTAGCTGAGTGATACTTGAACGATCATAAATTGATTGAGGAGAAGCTTGTGGTAGCAACACTTGAATGTTAATAAATTGGTTGAGGAGAAGCTTGAGCGGGCAGCAATGTATATGAAAGGAGAGGCATTGAAATGGTTTTAGCTGGAGGAAAGATGCAAGTCTTTCAAAAATTGGATTGGGTAGCAAGGAAAAAGATAGTTGCTAAAGTTACTTTTGCAATTGCAAGAGGAATCACACTCGAGAGATTTCAAGCTGTGTAATGAGAGACTACCATGAGGGAGTATGAAAGGCATTTCAGCATCATTGATTGGCATAAATGATGGGTTCTGGATGGTGAAGTAAGAATTATTCCGTAGGCACTTGTGTCAGCTGCCAGTGATGCTCATCTATGATCAAGAACCTGGCATAGAGGAAGAATAATATCTAACAGAGGAGGATTTGGTGGTACATACAGAATATCTAATAGCTGATATGGTGCCATAGATACAATAAAAAAGAGATTCGTTAAAAAATGGAGTGGAGTAGAGAGGTGAGTTGTGATTGAATTGTTGATGGGGTTGTCTTTGATTTCAGTGGTGGGCTTTGATACATACATACATATATATTAGTTCAATAACGGTGGAGTGGAGATTCGAATCTATGATGGTAGAAGATATAATATCTTAACTAGTTGAGCTAAGTTTAGATTGGATGGGTTTGATATATATTTTAGGATGATGAAGAACTAAGGGATGGATATGAGGAGAGGTGATAAATATAGTACTTTAATCAGCCGAGTTATGCTCACATTGGTCGGACTTCGATATATTTTCTAGGACGATAGAGATCGAGGGATAACTATGAGCAAAGGTGATTGATATAATATATTAACCAGATGAGTTATACTCAGGTTGGTTGGGTTTGATATATTTTCTAGGAGGTTGAAGATCAAGGGACGGATATAAGGATAGGTGATAGCGTTAATTGTCTGTGGTGAGACACAATTTTATTTCAAAGAAATTGTAGAAGCCTTAGCATTGCCAACGACCAAAACTTCAAGTTATGGAGTAGTAATGAATGGACAGAATATTTGTTCAAGGGGGTAATACAAATGTGTGACAAGAGGAGCTGATGCTTTCAGATTCAAGACTGGGGGTTTTCTTGAGGGTCATTAACGATAAGTTAAGTATTATGACACAAGTCTTTGACAAAAGCAGATAGATGAGGAAATTGATAAATAATGTATCAAGGAGAAGCTGTGACAAGGTACCTCTTCCATTTCAGGTACTTGATGCATCATGCTTCATTATGTCACAATAATAATTGCATGATCTCAAGCTGAGAATGTAGCCAATATTTTCTTTCGTGGAGTTGCTTGTTTACGTGGGATTCCTGGAAGTACTGTCCCCGATCATGATCGTAGTTAGACTAGTAATATTTTGTCAAAACTATTTAAATGGCAAGGCATGTTCTCCTTGTCATCCAATTTGAGGTGATTAGTTGAGGACAAGGATCGTAATTTGCTCTAACGAAACCCGAACCATAAGCTTGTTTGCAACTTGTGATAACTTGTGTAGATAGTGCTTCAGTTGCGTAGTTTAACATTTGTGATGGGTATGTGTAAGCGGACCACATAAGTACTGATTCAATGGAAAGGGGTGTGTGCTGATGATGTCACATGGGATCCAGCCATCACATAATATCCATTTCTAACCTCTCTTTGCCTCGAGGGCAGCGTTGCTATTTGAGGTCGGGGGTACTGGACGGCCCCTGACCCAAACAAAATGCAATGGAAGGAGATGTAAGATGATTGGGCAATGCGTCTGCGCAGTGATGTAAACTGATTAGAGGAAGCCCACACCGTTAGCAGATCTTGTCCGCTTTGGTTCATTACATATTGCTATCAGTCTCACTCTTTTAAAATGCGTCTACTAGGGAGAAGTTTCCACACTCCTATAAAAAAATGTTTTGTTCCGCTCTCCACCTGACGTGGGATCTCACATAGGAATTAATTAGGAATCTAGGAGGTTCATTAGGAACACCAACATGTAAATACGTATAGCAAGACGGTAACAGAAAGAGTGATTAACGGGATACTAGAGCAATTGAAAGTTCTTGAATTCTCCCTATTATAAGAATAACGTCCAAATAGTTTTCATCGACATTTCCACATCAAGTCTATTAAAAAATGTTGTGTGAATGCGCTCTCTTAAGCCTCTATATGGGCTCATTAATTATAGGTTTTATGTGCATGGTAGCTTGCATGATGACACTGTTATATTGCGAACATTATTCTGAGGCGTGAATGTCGAATTTTTGCAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGT

mRNA sequence

GAAGGGATTGCAGACTCGGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGT

Coding sequence (CDS)

ATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGA

Protein sequence

MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF

Homology

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BLAST of Carg12078 vs. NCBI nr
Match: KAG7030195.1 (hypothetical protein SDJN02_08542 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 540.4 bits (1391), Expect = 8.7e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 270

[Close]

BLAST of Carg12078 vs. NCBI nr
Match: XP_022948058.1 (uncharacterized protein LOC111451749 [Cucurbita moschata] >KAG6596919.1 hypothetical protein SDJN03_10099, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.5 bits (1194), Expect = 6.1e-127
Identity = 240/270 (88.89%), Postives = 240/270 (88.89%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. NCBI nr
Match: XP_023520906.1 (uncharacterized protein LOC111784424 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 3.1e-123
Identity = 233/270 (86.30%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNISG PNSS++YGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNISGAPNSSVSYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDD KNDDDVFVRLNHGDSLTVAVKP+PPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPRPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. NCBI nr
Match: XP_023005519.1 (uncharacterized protein LOC111498482 [Cucurbita maxima])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 234/270 (86.67%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNI G PNSSITYGNPPENTIEITIRTIGPARPSRLLVPS IKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNIGGAPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSRIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDD KNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. NCBI nr
Match: XP_022145366.1 (uncharacterized protein LOC111014834 [Momordica charantia])

HSP 1 Score: 412.5 bits (1059), Expect = 2.7e-111
Identity = 216/270 (80.00%), Postives = 225/270 (83.33%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNI GG NSS +  NPPENT++I +RTIGPARPSRL VPSP+KV DLRK
Sbjct: 1   MAEIVEEHNFNRNIIGGGNSSSSNANPPENTVQIIVRTIGPARPSRLFVPSPVKVRDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE +QLPIGNLKLILRGKILDD KNDDDV+VRLN G+SLTVAVKPKPPAEHLRD  DD
Sbjct: 61  LVAESNQLPIGNLKLILRGKILDDYKNDDDVYVRLNDGESLTVAVKPKPPAEHLRDGFDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHR+SGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRKSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1G8B5 (uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC111451749 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.9e-127
Identity = 240/270 (88.89%), Postives = 240/270 (88.89%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1KZE8 (uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123
Identity = 234/270 (86.67%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVEVPNFNRNI G PNSSITYGNPPENTIEITIRTIGPARPSRLLVPS IKVCDLRK
Sbjct: 1   MAEIVEVPNFNRNIGGAPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSRIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAERSQLPIGNLKLILRGKILDD KNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD
Sbjct: 61  LVAERSQLPIGNLKLILRGKILDDSKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           +EDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAW AILIWFIMAPVAH
Sbjct: 121 EEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWVAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1CW45 (uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014834 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111
Identity = 216/270 (80.00%), Postives = 225/270 (83.33%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNI GG NSS +  NPPENT++I +RTIGPARPSRL VPSP+KV DLRK
Sbjct: 1   MAEIVEEHNFNRNIIGGGNSSSSNANPPENTVQIIVRTIGPARPSRLFVPSPVKVRDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE +QLPIGNLKLILRGKILDD KNDDDV+VRLN G+SLTVAVKPKPPAEHLRD  DD
Sbjct: 61  LVAESNQLPIGNLKLILRGKILDDYKNDDDVYVRLNDGESLTVAVKPKPPAEHLRDGFDD 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHR+SGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRKSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A0A0L1Y1 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011840 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 8.6e-111
Identity = 209/270 (77.41%), Postives = 226/270 (83.70%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNR+I+GG +SSI+   PP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRSITGGADSSISNRTPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE ++LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESNRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILLMV+FSLSLK WAAILIWFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLMVVFSLSLKGWAAILIWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 240

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 240

[Close]

BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A1S4DY93 (uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.4e-107
Identity = 206/270 (76.30%), Postives = 220/270 (81.48%), Query Frame = 0


Query: 1   MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRK 60
           MAEIVE  NFNRNIS          NPP++T+E+ +RTIGP RPSRLL PS IKVCDLRK
Sbjct: 1   MAEIVEDSNFNRNISN--------RNPPQDTVEVIVRTIGPTRPSRLLTPSTIKVCDLRK 60

Query: 61  LVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDD 120
           LVAE S+LPIGNLKLILRGKILDDCKN+DDV+VRLNHGDSLTVAVKPKPPAEHLRD+ D+
Sbjct: 61  LVAESSRLPIGNLKLILRGKILDDCKNEDDVYVRLNHGDSLTVAVKPKPPAEHLRDEFDE 120

Query: 121 DEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAH 180
           DEDDLKFRLPESSSRLKKK+Y FLREKLKFPDILL+V+FSLSLK WAAIL+WFIMAPVAH
Sbjct: 121 DEDDLKFRLPESSSRLKKKVYTFLREKLKFPDILLVVVFSLSLKGWAAILLWFIMAPVAH 180

Query: 181 SWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMS 240
           SWDLGPL                              YILGTGFCIILLNLGHRRSGEMS
Sbjct: 181 SWDLGPL------------------------------YILGTGFCIILLNLGHRRSGEMS 232

Query: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 271
           AYSIFNEGFRELPGTLNADRLDRDVRLGQF
Sbjct: 241 AYSIFNEGFRELPGTLNADRLDRDVRLGQF 232

[Close]

BLAST of Carg12078 vs. TAIR 10
Match: AT2G35360.1 (ubiquitin family protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.9e-66
Identity = 130/239 (54.39%), Postives = 163/239 (68.20%), Query Frame = 0


Query: 31  TIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDD 90
           T+EIT +TIGPARPS++ V S IK+ DLR  +AE+ + P+  L++ILRGK L D ++ DD
Sbjct: 17  TVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGKFPVSTLRMILRGKALQDEEDGDD 76

Query: 91  VFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKF 150
           ++V L   DS  VAV P PPA  +    DDD+DDLKF+LP S+SR K+K+Y FLR KLK 
Sbjct: 77  LYVTLKDQDSFIVAVIPNPPA-GVESFDDDDDDDLKFKLPPSASRWKRKLYYFLRNKLKL 136

Query: 151 PDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYYIVRKYMHVMETSLVFFLNYHG 210
           PDI+LM +FSLSLK W  I +WFI+AP+AH WDLGP+                       
Sbjct: 137 PDIILMGLFSLSLKMWVIITLWFILAPIAHRWDLGPI----------------------- 196

Query: 211 TTSNRIFYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQ 270
                  +ILGTGF IILLNLG R+ G++SAYSIFNE FRELPGT NADR+DRD+R GQ
Sbjct: 197 -------FILGTGFSIILLNLGKRQPGDVSAYSIFNEDFRELPGTYNADRIDRDIRAGQ 224

The following BLAST results are available for this feature:

BLAST of Carg12078 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030195.1	8.7e-150	100.00	hypothetical protein SDJN02_08542 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022948058.1	6.1e-127	88.89	uncharacterized protein LOC111451749 [Cucurbita moschata] >KAG6596919.1 hypothet...	[more]
XP_023520906.1	3.1e-123	86.30	uncharacterized protein LOC111784424 [Cucurbita pepo subsp. pepo]	[more]
XP_023005519.1	1.2e-122	86.67	uncharacterized protein LOC111498482 [Cucurbita maxima]	[more]
XP_022145366.1	2.7e-111	80.00	uncharacterized protein LOC111014834 [Momordica charantia]	[more]

BLAST of Carg12078 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12078 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8B5	2.9e-127	88.89	uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1KZE8	5.7e-123	86.67	uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482...	[more]
A0A6J1CW45	1.3e-111	80.00	uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0L1Y1	8.6e-111	77.41	Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011...	[more]
A0A1S4DY93	3.4e-107	76.30	uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=...	[more]

BLAST of Carg12078 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35360.1	4.9e-66	54.39	ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019387	Uncharacterised domain SAYSvFN	PFAM	PF10260	SAYSvFN	coord: 216..264 e-value: 4.3E-18 score: 64.9
None	No IPR available	GENE3D	3.10.20.90		coord: 23..119 e-value: 2.4E-5 score: 25.9
IPR039159	SAYSvFN domain-containing protein 1	PANTHER	PTHR13527	UNCHARACTERIZED	coord: 33..270
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 32..84 score: 11.202653
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 28..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12078-RA	Carg12078-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding