Carg12078 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGGATTGCAGACTCGGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTACGGAAACCTTTCTTCTTCTTCTTCTTCTTCTTCTTCGATATTGATTGATTTTGTTTCATCAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGGTATAATTGCGGTATTCTGCTGATTGCGGGATATTTCATTCTGTTGTTTGTATCACGGTCGTCTGAAATACTATATGTAGTCTAGGTTTATACTTTCTCTATTGCTTTTCCGTATACACCGCCCTTTTCATGGTGATGCTGGCCCCTTTGATGACTATACATGCTTCAGCTTTCAAAATGTCGTTGTGATGCATGTTTCTCCATATTACACATTTCTTGCTTCGATCTTCTAGGTTCTGGACTATCATTTTTCATATGCTAGTACCTGCTTGGATTCTAGTTACAAATAAAAGCAAGAAAATGTCCCACCGCTGAAAATTGAATCATGATTCTTGCTTATTGATCTTGTTTTTTTTTTTTTTTTTTTTTTTTTCTAATCGACCTGTCTTGTGTTGTTCGTGGTACTTTGGCTTCTTGTTGCACAGTATCTGTTTCTTTGTTGTTCTGCATGCTTTCTATACTGTTCTGAATGGTTTGAGTTTCTATGGGCTTATCATTTGACAATTCAGTTTGAAATCAGTAATTGGATGCCTCCGTTTCTTGTGTAGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGGTATGAACCATTAAGTATTTCAATTGTTGTTCTTAGACAGGAAGCTTAGCTTGAAGCTGTTCTCAATTATCTGTTTCGCATCAATGGTTACATTTTCAGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGGTAATAATCATATGCTAAATTATGCCAAGAAGTTCTATGTACGAATTTTCTAATTTCATTTTGGTTCTTTGTTCTGTGAATAGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATGTAAGTAATAATGTTCTGTTAGTTACTAGATTTTGAATTTTGGTGCCATTATTTTCGGTAGTTATTTTATGGCAACCTTAGGAGCTGTTTCTTAAACAGTTGTGCAAATCAGTTTTTCAAAAATATTTTTAGTATTGCAACATAATTAACAAGTGTCTTAGAATATGGTTTCACTGTGTTTGATCATTGTTATCCAATTGTGTGGTCTGAGAAAACCAATTTCAATTGTTCTTAAAAAATCAACACATTTTGCAGATAATAAAGCAAGAGAAAACAATTTTTAGCACACAATTACTTCAAAATGTTATCAAATTAGAGTATTTGGTGCGGAAAATTACTGTTTTTCAATTTGACTCTCGTAAATCCTCTCATTTTTTTGAGTAGTGTCTCTCTCAGCACGTGACAATTTCTATTCTCCATATACTTTTTTGAAGCTGAAGTACCTTATTCTAGTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATGTTTGAGTATTTTTTGCAGATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGGTAAGTAGTATTTGAGAGAAACTCTCATCCCATTCATGTCCAGCTGAGTTGTAGGACTTTTGTATGCTTTAGATAAACTAAGTCAAGGCATGATTGTGTGTTTATACATTCTCCGATCTCATGGCTTGTCCAGTTGTTTGTTCTTAAATGTGTTAGGTCCCTATACATTTGTGGAAAAGGAAAAGTACGCGGTTAAAGGGTAACAATAAGAATGGGTGACGATGCAAATTGATTAGTAGAGGTGGGAATTAGAAAGAATAAGAACCTAGGAAGCTGGTGAGAACTATAGCATAATGAAATACTTATAGCTAGGGGTGTCAAAAGAGAAGATGTTATTCTTTAGGTGGTGCTCGGAAGTCTCAATTTCTCCCTCTTGTTTGTGCAACTTTCCACTATTTTTTCAATTACATATCTACTGAGTAGTGGTACTCGAACAATCGGTTCCTAGGACTTGATGGTTGCAAATAGGAAAATAGAGAATCGCTTGGAAGCAATTGAGGAGAAGTTACTATAATGTTTAAATAGACTTGTCGGTAATGCATTGGGCAGGGGATGCAGGAAATGCCCAAGGAGATGAGCCATTTGATGGAATACTATATGGAAAATATAATGAATATTGAGTTTGGGGCTAATCTTGTGCCAACCTCAGAAAATAAGGATAAGGTTCCAATCATACAAGCAAAGTATGGCATCAATTAAGTGCTAGATTAAGGAAGGGGGAAGGCTTCGATAGGATCATCATCTAGACCAAGGGGGAAGGGCATCATAGAGAACTAATGAGGATCCAAAGTGGAGATTTGAAATGGAAATTTCTAGTGACCCGCTGTGGCCTGCTAACCTTAGCTGAGTGATACTTGAACGATCATAAATTGATTGAGGAGAAGCTTGTGGTAGCAACACTTGAATGTTAATAAATTGGTTGAGGAGAAGCTTGAGCGGGCAGCAATGTATATGAAAGGAGAGGCATTGAAATGGTTTTAGCTGGAGGAAAGATGCAAGTCTTTCAAAAATTGGATTGGGTAGCAAGGAAAAAGATAGTTGCTAAAGTTACTTTTGCAATTGCAAGAGGAATCACACTCGAGAGATTTCAAGCTGTGTAATGAGAGACTACCATGAGGGAGTATGAAAGGCATTTCAGCATCATTGATTGGCATAAATGATGGGTTCTGGATGGTGAAGTAAGAATTATTCCGTAGGCACTTGTGTCAGCTGCCAGTGATGCTCATCTATGATCAAGAACCTGGCATAGAGGAAGAATAATATCTAACAGAGGAGGATTTGGTGGTACATACAGAATATCTAATAGCTGATATGGTGCCATAGATACAATAAAAAAGAGATTCGTTAAAAAATGGAGTGGAGTAGAGAGGTGAGTTGTGATTGAATTGTTGATGGGGTTGTCTTTGATTTCAGTGGTGGGCTTTGATACATACATACATATATATTAGTTCAATAACGGTGGAGTGGAGATTCGAATCTATGATGGTAGAAGATATAATATCTTAACTAGTTGAGCTAAGTTTAGATTGGATGGGTTTGATATATATTTTAGGATGATGAAGAACTAAGGGATGGATATGAGGAGAGGTGATAAATATAGTACTTTAATCAGCCGAGTTATGCTCACATTGGTCGGACTTCGATATATTTTCTAGGACGATAGAGATCGAGGGATAACTATGAGCAAAGGTGATTGATATAATATATTAACCAGATGAGTTATACTCAGGTTGGTTGGGTTTGATATATTTTCTAGGAGGTTGAAGATCAAGGGACGGATATAAGGATAGGTGATAGCGTTAATTGTCTGTGGTGAGACACAATTTTATTTCAAAGAAATTGTAGAAGCCTTAGCATTGCCAACGACCAAAACTTCAAGTTATGGAGTAGTAATGAATGGACAGAATATTTGTTCAAGGGGGTAATACAAATGTGTGACAAGAGGAGCTGATGCTTTCAGATTCAAGACTGGGGGTTTTCTTGAGGGTCATTAACGATAAGTTAAGTATTATGACACAAGTCTTTGACAAAAGCAGATAGATGAGGAAATTGATAAATAATGTATCAAGGAGAAGCTGTGACAAGGTACCTCTTCCATTTCAGGTACTTGATGCATCATGCTTCATTATGTCACAATAATAATTGCATGATCTCAAGCTGAGAATGTAGCCAATATTTTCTTTCGTGGAGTTGCTTGTTTACGTGGGATTCCTGGAAGTACTGTCCCCGATCATGATCGTAGTTAGACTAGTAATATTTTGTCAAAACTATTTAAATGGCAAGGCATGTTCTCCTTGTCATCCAATTTGAGGTGATTAGTTGAGGACAAGGATCGTAATTTGCTCTAACGAAACCCGAACCATAAGCTTGTTTGCAACTTGTGATAACTTGTGTAGATAGTGCTTCAGTTGCGTAGTTTAACATTTGTGATGGGTATGTGTAAGCGGACCACATAAGTACTGATTCAATGGAAAGGGGTGTGTGCTGATGATGTCACATGGGATCCAGCCATCACATAATATCCATTTCTAACCTCTCTTTGCCTCGAGGGCAGCGTTGCTATTTGAGGTCGGGGGTACTGGACGGCCCCTGACCCAAACAAAATGCAATGGAAGGAGATGTAAGATGATTGGGCAATGCGTCTGCGCAGTGATGTAAACTGATTAGAGGAAGCCCACACCGTTAGCAGATCTTGTCCGCTTTGGTTCATTACATATTGCTATCAGTCTCACTCTTTTAAAATGCGTCTACTAGGGAGAAGTTTCCACACTCCTATAAAAAAATGTTTTGTTCCGCTCTCCACCTGACGTGGGATCTCACATAGGAATTAATTAGGAATCTAGGAGGTTCATTAGGAACACCAACATGTAAATACGTATAGCAAGACGGTAACAGAAAGAGTGATTAACGGGATACTAGAGCAATTGAAAGTTCTTGAATTCTCCCTATTATAAGAATAACGTCCAAATAGTTTTCATCGACATTTCCACATCAAGTCTATTAAAAAATGTTGTGTGAATGCGCTCTCTTAAGCCTCTATATGGGCTCATTAATTATAGGTTTTATGTGCATGGTAGCTTGCATGATGACACTGTTATATTGCGAACATTATTCTGAGGCGTGAATGTCGAATTTTTGCAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGT GAAGGGATTGCAGACTCGGATGAGAGAAGACGGAAGCTCCCTCTCACTGCACGCAAATCGCTGGAAGACGTACCCGAATCTTTGTCTGTGTCATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGATAAACTTAATATGTTAATGCTGATTTTGTAGTTGAACTATAGACAAAAGGTAATGTTCCTAAGGAAAGTTAATACTCCTGTCTTGTTCACTTATGTGTATAAAAGTTCCATCTTCAGT ATGGCGGAGATTGTTGAGGTCCCCAATTTCAATCGGAACATTAGCGGAGGACCCAATTCGAGCATCACCTATGGCAATCCTCCGGAAAACACAATCGAGATCACCATTCGAACCATCGGCCCTGCGCGTCCCTCTCGCCTTCTCGTCCCTTCGCCGATCAAGGTGTGTGACTTGCGGAAATTGGTCGCGGAGCGTAGTCAATTACCCATTGGGAATTTGAAGCTTATTTTACGAGGAAAAATTTTGGACGACTGTAAAAATGACGATGATGTATTTGTGCGGCTCAATCATGGCGATTCATTGACTGTTGCTGTGAAGCCAAAGCCCCCAGCAGAACATCTTCGTGATGATTCTGATGATGATGAGGATGATCTGAAGTTTCGGCTTCCAGAGTCTTCAAGTCGGTTGAAGAAGAAAATTTACAATTTTCTGCGCGAGAAGTTGAAGTTTCCTGATATCCTTTTGATGGTGATTTTCTCTCTCAGTCTAAAGGCTTGGGCTGCTATACTTATCTGGTTTATCATGGCACCTGTTGCCCATAGCTGGGATCTTGGACCTTTATATTATATTGTGAGAAAATATATGCATGTCATGGAAACAAGTCTGGTTTTCTTTTTGAATTATCATGGCACAACATCAAACAGGATTTTCTATATACTTGGCACTGGTTTTTGCATCATTCTACTAAATCTTGGACATCGGCGATCTGGGGAAATGAGTGCATATTCCATCTTCAACGAAGGTTTCAGAGAGCTTCCAGGGACCCTCAATGCAGACCGCCTCGATAGAGACGTTAGGCTGGGTCAGTTCTGA MAEIVEVPNFNRNISGGPNSSITYGNPPENTIEITIRTIGPARPSRLLVPSPIKVCDLRKLVAERSQLPIGNLKLILRGKILDDCKNDDDVFVRLNHGDSLTVAVKPKPPAEHLRDDSDDDEDDLKFRLPESSSRLKKKIYNFLREKLKFPDILLMVIFSLSLKAWAAILIWFIMAPVAHSWDLGPLYYIVRKYMHVMETSLVFFLNYHGTTSNRIFYILGTGFCIILLNLGHRRSGEMSAYSIFNEGFRELPGTLNADRLDRDVRLGQF Homology
BLAST of Carg12078 vs. NCBI nr
Match: KAG7030195.1 (hypothetical protein SDJN02_08542 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 540.4 bits (1391), Expect = 8.7e-150 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of Carg12078 vs. NCBI nr
Match: XP_022948058.1 (uncharacterized protein LOC111451749 [Cucurbita moschata] >KAG6596919.1 hypothetical protein SDJN03_10099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 464.5 bits (1194), Expect = 6.1e-127 Identity = 240/270 (88.89%), Postives = 240/270 (88.89%), Query Frame = 0
BLAST of Carg12078 vs. NCBI nr
Match: XP_023520906.1 (uncharacterized protein LOC111784424 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 452.2 bits (1162), Expect = 3.1e-123 Identity = 233/270 (86.30%), Postives = 237/270 (87.78%), Query Frame = 0
BLAST of Carg12078 vs. NCBI nr
Match: XP_023005519.1 (uncharacterized protein LOC111498482 [Cucurbita maxima]) HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122 Identity = 234/270 (86.67%), Postives = 235/270 (87.04%), Query Frame = 0
BLAST of Carg12078 vs. NCBI nr
Match: XP_022145366.1 (uncharacterized protein LOC111014834 [Momordica charantia]) HSP 1 Score: 412.5 bits (1059), Expect = 2.7e-111 Identity = 216/270 (80.00%), Postives = 225/270 (83.33%), Query Frame = 0
BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1G8B5 (uncharacterized protein LOC111451749 OS=Cucurbita moschata OX=3662 GN=LOC111451749 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.9e-127 Identity = 240/270 (88.89%), Postives = 240/270 (88.89%), Query Frame = 0
BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1KZE8 (uncharacterized protein LOC111498482 OS=Cucurbita maxima OX=3661 GN=LOC111498482 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 5.7e-123 Identity = 234/270 (86.67%), Postives = 235/270 (87.04%), Query Frame = 0
BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A6J1CW45 (uncharacterized protein LOC111014834 OS=Momordica charantia OX=3673 GN=LOC111014834 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111 Identity = 216/270 (80.00%), Postives = 225/270 (83.33%), Query Frame = 0
BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A0A0L1Y1 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011840 PE=4 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 8.6e-111 Identity = 209/270 (77.41%), Postives = 226/270 (83.70%), Query Frame = 0
BLAST of Carg12078 vs. ExPASy TrEMBL
Match: A0A1S4DY93 (uncharacterized protein LOC103490803 OS=Cucumis melo OX=3656 GN=LOC103490803 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 3.4e-107 Identity = 206/270 (76.30%), Postives = 220/270 (81.48%), Query Frame = 0
BLAST of Carg12078 vs. TAIR 10
Match: AT2G35360.1 (ubiquitin family protein ) HSP 1 Score: 248.8 bits (634), Expect = 4.9e-66 Identity = 130/239 (54.39%), Postives = 163/239 (68.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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