Carg11766 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11766
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	39S ribosomal protein L45, mitochondrial
Location	Carg_Chr10: 7060653 .. 7074520 (-)
RNA-Seq Expression	Carg11766
Synteny	Carg11766

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACCTCTTCCTGTGACCGATCTTACTTTTCATGATCGGAGAAAATAGCGCCAGAGGTTTTCAGATTTGGTACTAGAAATGAATTCCAGATTACTCCAAATCCTGTATCGCACGGCACAGAATCGAGCATTTACTTCTCGGTAAGCATTTGTTATATAGTTTGTGATTTCCTCTTTTCTTTGTTTGGTTTCCAAGAATTTAGAAAGTTGAGTGGCTGATAGTAAGGGAAAATTGAACTCTGCTACTGTTTTTTTTTTTTCCTTAAATTCACAATTGATTTTTTGGGGAATGAGAAAGCTCAGGTTGGTAATGGCGGTCTTTGAGTGTAAGGCGTTTTTTCAATCATTGTTTAGCTGGTTGGAAAATGTAACATTCTGCTGGAAATCTGGAAATGGAATATCATTTACTTGAATACAGCTTAATTTCTAATCATATTGTTAGGTGCTGCATGATTATTATTGGATTTTTTGTTCTTTATTCTCATTTTCTTGGCAACGTCGACAAGGGTGTTTATCCTTTCCTTCTTATTTAGTGAGAATTGAATATGTTTCATCTTCTTATTTTGGTCTAATGGTGTTATTGTAAAATGTGTAATGCTCAGGGTTGGAAGTTCAGCAAACTATTCATGTGGCATCACAAATGGTAACTTCGATGATTATTATTATTTTTAATTTCTATTTGAATTTTCTTACCTCAGGCTTAGTTGCAGGAACTTCTTAAAATTAATATGGTTTTCAGGTGGTTTAGTTAATCAATTGGGTATTCAGAAGACTTCTTTCCTCAGTAACAGTCACACTGCTTTTTCACTGGTTCGGGGACATAAGATGATAATATGTTCTGCAGTGGTAGTTTCCTGAACTTATACGACTTTGTTCCATTTTTCTTTTCATTGAACTTATATTCTTGTTTTTTTTTAAACTTCTTAGGCTGCAGATTTATCAATATTCTCGCATAGCATTGGCATTAGGTTGGCGACAACACAAGCAAAAGCCCCCCCACAAGCACGTCAAATGGTGAGTTTATTTTTGCCTAGTTGATGACGTTATAGTTCATTCAAGACAGTTCCATTGGGATTCAATCATTAATTGTGGAATAATTATGGTTATCTTGATCTAAGTTCGTTTTACCATTTATTTGATTCTGTTAAACATGAAACAAACTCCTTGTAAATGCAAAGTATGATAGTTTCTTGGTAATTGGCTTTTCTATTTTGAAAATGTTGATTGTTGCTTGTTTATCTTTCTACATTATAGTTTTTTAAAATTAATTTGTTACATGGAGGATTGATATCATATCGTGTAAAAGGATAAATATGTTTTTTTGTTTTATGAGAAACCGAGCTTTTATGAAGAGAAAATGAAAGTATACATTAGCCCAACGAGAGAAGCCATACCTTAACTATACAACAAAGCATTCATAGTTCAAAATAGAACCTAAGAGATAATTACAGAAGTCCTTGGAGGTTAACACCAAGTAGAGGCATTAAGCCTGTCTAGCGGCCGCACCTATGAGTATTTCCTTGTGAGTATTAAGGCTATTTGGAGGCTAGTGTTGAGAAAGATCACAAGTAGAGGCATTGAGCTTATTACACACAAAGATAGGCTATTTGGGACGGTGATTAAATTATGATCAAGGTATGAATAAAACAATTCCTATAGTAGTGAGCTATTCAAGACAATCAAGGTAAGGTAATTATGAAATTACAACAAAATAAAATAAAGAAAGGATCAAACAAATAAGGGACACAAATATCTTTGGGTAAAACTGCACATAGAAAATGAATTAAAAAAAAAAGGTTGTTATGATTTTGGCTAAATTGCCTTCTTAATTATAACATAGAAGAGAATGATCTAACTTTCCTTTTTATGGAATTCAGGTAAATTCAGAAAGTTATCTTTGAGTTTGAATTAGGAATGAAAAATATCAAACACAAGGGTTACAAATTTAGACCGCTTAAGCAAATATGAATTAAAGTTGATTTGATCTTCAAATAAACAAGCAAATAGTCTGATAAATGATAAGGACAATTTATATACACAATATTAAGAAGCAAAATTTTATTTATTTATTTATTTTTTGTTCAAAATGATCTAAATATGATCTTTAAGAAGAAAATGAGAACAAAGTAAAAAAAAAAAAAAAAAAAAAGAAGACAAAGAACGGTGGAAATGACAACAAGAAAATAAATGGACATGAATATAATTAATTACATAAATGAAAGATAAAATCAATTTTAGATTAGGCCCCAAAGGTGAAACCTAGGCTCTAATACCAAATTGATAAGGCAATTCTAATTCTCAGCCCAACGATCCAAGCTTTTGTTGAAGCAAGTACCCTTGAATCAAAGAAATTAACTCCTCGTACAAAATTCGGATCAACCAAGAGATAAGGCTAGAATTAGATTATCTCTTAAGATCAAAGATATAGAATCAAGATTTGGAACCTTGTTCTAAATTGAGCCACTCCACAATCGAACTTGATCAAGGTTTGATTGAATGACTCGGATGCAATCTACCCCAAGAATTGTTTGAAACTTAGAAATGGCGAATGTGATGCTCAAATTTCTAAGGGTGAAAGGCTCAACTTGAGAACTTAATTTCATTCATAAAAAATCTGCTTTTACATACTTATTTGTGGGTATTTATAGTCTCTCCACGAAAGAAACTTCCAACTCTTCAAATGCCCACTAAAAGAAGTTACTCCCCACTGCTCTTCAAATGTCCACTAAAAAAGAAGTTAGGGCCCCTTTGACAATTAATTTTCCACCCTTTTACCCACTACAAGAAATTATGGAATTAAAATAATAAATAAATTTTTCTAAGAAATTATCAATCTAGTGTTATTTATAGCAACCCCATTCTCTACTTCAACGGGCAAATATTCACTTATGAAGCTCCAAATGGTTATTCCTCAATTGAATCAGCTTGTAACACATGAAATAGAGGTTGAACCGAGCCTATCTAATTTTGTAGATGAAGAATGAATGCTTATTGAATCTTTTTGGCCTTGGATCGTGTAATAGGTATAGTTGGAACATTTGGAACACCATGATCCTTATCTTGGCTTCATTTAGTCCTATGAAAAAAGGGTTTTTTATCGGTTTCGATGTCTGAAGGTCCAAAACGGTTCAATATTCTGATTTGGATCTTGCTTAACAGTCTTTTAAGTTCTGTTGAGGTGCTCCGAAAAAATTACCTTTATAATATTTCATGCATTACAGTATGTTCACTTTGCTCCGCGGATGTAGAAATGTTAATTCATTTGTTATTAGAATGTCCTTATTCTTTGGCTTGCTGTTATAGTCTTTTCAACATATTCAAGGCGCAGTGGGTGTTTTCAAAGAACACAAAATGTAATGTTGTTCAGCTACTTATAGGGCTTTCATTGATTTTGTGGTTGCAGTTTTTATGAACAAGAAACATCTTTCTATTTATGCATGAAAGGGTACAAGATATTTGAAGAAACCACCTCATGAGAGTAGAAAGAAAAAAAATGATAAACCGACCAAATAAAGTGGGCTGAAACAGAGCCCCAAAAGAAAGAATTCAATAGCAAACCAAATAACATCCACCGTCTAACCAAAAGGGAAAAACTAGAAAAGGAACAAAGGAACTCTTCCCAGGCAACCAAAAACCTGAAAGACACCACAGACAATCTAACAATGGCTAGAAGGAAATCTGAGGATATTGGAAAACAAGCGTATTCTTTGGTTTGATTGTTTTGAATCTATTAGGCTCAAGGCTTCTCAACAGTTTTTGGAAAAGCTCTTTTTTGGTTTTACCTTACAATATATTTATTTGATGTCGGAAGCTTTTATTTTTACATTGTAATTTTGTTTTATCTTTATTTGTCAGTTTGTTTCTTCTTTCACTCCTTTTATTCATTTGTATCTTTTGAGCATTAATCTCATTTCATTCCTTTAATGATAAGTTTTATTCGAGGTAAAAAAAAATGCAGTTGTCTCTTTCAACCTGTCTAAACCATCGGGTTATATTCATTCCACGTTGTTCTTGCACTCAACATCTTAAAATAATCATTTTTATGAGAAATATCAATATCAATTTACTCTAAAGGTTTATTTTTATGGACAAATAGAATGTTGAAATTCTTTTATGTTTTAATTTCTTTTATCGTCTTTTTCATTGAAAATGAATTGTCAAATCTTTTACTCTTTCATCTTCTGTCTTAAATCTTTTGATACTTTTGTTAAATCATGCTTGCAGGGAGCCCTCAAAGTTTCCATGTTGAGTCCTGGAATTATCTATGAACCTTATTCACCTCGTCAACCAATCCCATTTTGGCAGAGGTTAGTTGAATTCCAAAAACTATTCTATTTAAAAAGAAAACAACTATTTTTTAAATTTCGATATTATCTCATCCTACACTCGCCTTCCGACAACCAAAAACTAAATAAATTAAACTCATGAAAATCAAACTAATTAGAGGCTATTTCAATTATGTTGGCAACAATTTACCAAGTACTTCAAGCTCAACACTAGTACTACTACTTGTGAGTATTTCCTTTGAATGTTTTTTTTTGCATTTGGATTTTGGTTAAATTACCATTTCTTTTTGTTAAATCACCACTCTACCCGAAAGCTTTTAAATGATAGTTATCATAAATTTAGTCCTATATCAATACTAATTTACAAGGGTATGAAGGACTTCCTATTTTGACGTCATTGAATTACCACTCGACCTAAATGCCTAAGCTAATGAGTATTGGTCTAAGAAGCATGGATACGGTATGAGTCACGAATACACACTGACACAGTGACACCATCTTTTAAAATCCAGAACATGTTTAGTGAAGTATATATCATTTTTCTACAATATGATATTCAAAGTCAATGACTTTATGCATTTATATGCTTAAAGAAAAGTTGACGAATGGGTACCTAATATTTCGGTTGGTCAATTTAATTATCAGAAACACCTTTTATTAAATGTTAGTTCATTATCTACATCCGAAGAGAATAGCCAAGGTAAGAAAATTGTTCATATTTGGTAATGGAAGTGACGATTTAAGAGATTTAACCAATTAATGGGGTCTAAATTGAAAAGTTTAAAATTGTAGGGATCATATTGAAATTAAGCACGAATTATTGATTTAACCCTTGCAATCTGTTTCCATTTTATAAAATAGTTATTAATTTTGATTATTCCTTAATCGGTTTATTTGTGTTTCTTTTGTATGTCTGTCTTTTGTTACATTAGGTAGATGACAGTTGCATAACCCAGAAGGTTTAGTTATTTAATTATATATTTATTTCTATTTTAGTATTTTTGGAATTTGTCATTATTTACCATGTTTTGAGCACTTTTGATGTTTCTATGTCAGATGGTTCACAAGAAGTGGTTGGAGGAGAACAAAAGACGATATCATTTTAGAGGTGAATTGTGCCATTTCAGCCTTTTGATTTTGAGCTGTTATGCTGCAACTGCAAGTTCTTATTTAAAAAAAAAAAAAAAAGGCTATTATGCTGCAAGTTAACTATTTATCAGTGTTCTTTTGAGGTCGCAATGCCCAATTTTCAGTCTTCTGCTTCCCTATCCCTTTTTCCGGTTTCTTTTCTATCTAACCTTTAAAACTTATCCCTTCGTTGTTGCATGGCAAAATGAAGTAATGATGAGGGAGATGAGATGTAGAGGGTGTGCATCGATTATGAGGTGTTTTACCTTCAAAAAGGTGGTTGTGTAAGGTGTGTAGAAGAGCATAGGAGAACACAAGTGGAGAGGTTGGAGTTGGAATTGGGAACGCTAGCTTGTCTCAAGGATTGCTTGGGGTCAGATTTTTGATCTAGAAAACCCATTAGGTTTTTGTGGAGGTTGGAAACATGAGTGACCTTCTTCCAAGTTCCATCTAAAGCGAAGGATAGATTTTCTCTAGCTTCTTTGGAAACTCATAGAGGAGGAAGGTTTTTTGACAGGGTTATGGGATGATTCTCCCTTGTTTTGGCATTTTTTGGAACTGGCTAAGCTAGTGAAGAATCAACCTAGGGCAAAGTGTAAGATCTCTGGTGACACAATTGAAGTCCTTTGAGACCCTCAAAGCAATTGTGCGACAGTTCCTCCTGCCCTTGATCAAGTGAACCTACTCAAAAAGGTGGTTATGAAAGGTGTGTGTAGAAGAGCACAGAGGAATGTGAGTGGAGAGGTTGGAGTTGGAATTGGGAATGGTAGCTTGGCTCAAGGATTGCAGGGGGCAGCTTTTGAGCTAGAAAACCCATTAGGTTTTTGATGTAGAAGAAGGTTGATTTGGCAACTTGTAGAGGGGGAAGGACTTTTGGCAAGGGTAAGGAATAAGGAGATTCTCCATTGTTTTGACATTTTTCTGAACTCCTTGCATCGGGGGATTGGGGTACGATGTTTGGTGTCACAATTGTAGTCTTTTGAGACTCTCAAAATGATTGTGACACTTGCTCTCGCCCTTGCTACGACAGAAGCTTGCACGAATATTAACTGGGCAAGCAAGGAAAGTCAAAATGTTTATGGAAGGTGTCCGAGTGAAAGAACATACTTAACCTTAGTGCTTGAGCAAGTCAATCAACTCAAATTCAGGATGTCGATGGCACAATAGGCCTATCTTGCATTCTCCACCTCCGCTTTTGAGAAAAATATTTTTAGAAAATGGGATTATGGAAAAAGGTTTTGGAAAATCACTGGAAAACTTTTGAGAAAACATTTGTTGTATGCTAAAAAGCATCTAAGATAAACAACAAATTTGATAGTATACCATCAAGGTAGGAAGGATGATAATCAGCCTTACACATAGTACATTGAGGCATATTCAATGTGTCACCCTTGCACATGGCAAGTGGTGAGGATTCATACACTGACAAAAGACAATGAAACTAAATTGGTATGCAAAATGAAAGCTTGGTAAAAAAAGTTATTATGGGCATAACTATAGGTAACACCCTGGACAAACATGATCATGACATTTGACTTCTATGCTCTAGCTAGGAAAAAGAAGTTGGAGATCCTCAATATTGCTACCAGAAGGGAGGTCCAGTTGAAGTTTGGTTCAGAGTTTGAGTTTTCTCTGACTATTACATGCTATAATTATTGTGAAATTTAGCTAGATCATATATTTTTTTTGGAGCTATGACTTTGCTTATGCAATCTATAGTTGTTTCTTCGTGGAGTTTGACTCTTGTTTTGCTAGGTCTAGAGGTTGTAGAGAGACAATTGAGGAGTTTCTTCTTCACCCACCCTTTTGTGAGAAGGGGAGGTTGTTTCTGGGGCGTGTTGGGATCTGTCCGGTTTTGTGGGGCTCTTAGGGTGAGAGGAACACCTGAATCTCTTTAGATGGCTTGAAAGGAATTTGATTGAGGTTTGGTCTTTTTTAAGGTTCCATGTTTCTATCTCTGGTGGTGAAGCGTTTTTTGTAATTAACTTTTAGTTGGTCTTATTTTACTTGACTTTAGCTACTTTTTAGTTCATAAAGTTTTGTTATTCATTTTTTTTTTGATGAAGGACAACTTTATTGATGTTTGAAATTTACAAAAAAAGGAGGCATTATTAATGATGTTTACAAAGACCTTCCCCATTTATAAGGAGGGAGATATGACTATAGGAGGCAAAATATTAGACAATTTACACCAACATAGAGCTTGGTAAACTGCATTGTAGAAGAGCGTAGTATAAGTTTGTGTCTTTTTCGTGATTATTCTTTGATTTTTTTCTTTCCATAGATTTAAAAAAAAAAAAAAAAAAACTATGGCGAGGTCGACTTTTGCATTCTTGGAGGAGTGGTACGTTTAGGCCACGACCAGTAAATCCTTTACCTCCCTAGGAAAAGTGAGATGCCATCCAAAGACACTAATAATCTATGTCTAGAAATGAGCGTATGTACACGGCATAAATAGGTAGTTTTGTGATTGGTTGGCACAGAAAAAGTTTTGTTATTCATAAAAATAAAACTTACTCTTGTTCACCTTACTACTGAAACAATGTCTGCTCAATATACATTGGCTGCTTATCTGATGTGAACCTCTGTGCGCTGATTTATTATAGAAGAACTTATGCTCATGTATGGAAGTAATAGATAAAGGCCGCCTAAGTTTTGTGGAGGTTGCCTAATAGAGGCCTGATATCTTTCTTTCTTTCTTTCTTTCTTTTTTCTTTCCTTTTTTGCAGCTAAAAAGTGCTTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGAAACAATTTTACGAAGAGGCAGTAAATTTATATAAAGAGGTATTCAAGATTCGTGTATCACATTACTGGTCTACAAAGTGCTTTATGAAATATATTTAACATTTTCGTTCAGTAAGATTATCTTCAGAACCGTTTCCTTTGTGGAAAGAACCTGCCTGGCTTTTCATAATTTTGTGGATGATATAACATTGTAAATTTCTTGAAGGCCAAAGAGTTGCTTTTGCTTCTATTGACGACTACTTTCCTCTGTGAAAGAACCTACCTGGCTTTTTCATAATTTGTGTTTGGATATTGAAAATCGTAAATTCGTTCAAGTTCTAATGGATTACCGTTGCTACATACAGTGAAGTTGTAACGTAATATTAAAAAAGAGTTTGCTGTTGCTTCTTGATTTGTTCTTGGAGAAGTATCTGGGGATGGGAACAGTACACAAATCATTTTCTGAAGCCAATTTTCCAGCAGGGGGAAGGCCATTACCCTTGTAACATAACCTTTTTATAGTTTCATTACCCTTGTAACAGAACCTTTTTGATTTGGCAATTGATGCATTTTCCAGTTTTCTTCAACGAAATTTGTTATGAGTAAGAAGAAAAGTCAAGTTTGTTTACCCACGAGCTGATGGCTACCTTCTCATTTTATCTTCTTTTTATTTGATGTAAAATTGCTGAACCTTGAATTGTACGTTTTCCAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGTACGCATCACCCTTTCCTTTTGCTTTTCAGCTATGCCTACTTTGAGATCGAGTTCTCTTTCCCACGTTTTCTTTACTTGTTCTCGTCTATTAACCATGCAGATTCTGTTTTTTTTTTTTTTTGGAAAGGAAACAAAACCTTTGTTGGATTCAAGACTGATATGTAGATTCTAACTTATTACCTCGGCCTCACCTACAGGCATTGAAGAATGAAATCAAACTCAGAGAATCCAAATGGAACAAAGTTTACTGGGAAATGATCCTACCAGTTGTCAAGATCCGCACGCTACGAGCTAGATTGGCAAGTATTATTACTCTCACATTTCTGTTTGTCCTATTCATGCATTTGTCAGGCTGCTCACAGTAAGAGATATTTTTGTGATACAATCATAACCTGTCCATGTTCCAGTTCCTCAATTTTTCTAGTTACTCAGCTTTAGAAGGTCATGCCTGCATTGAAGAGAAAAATAATAGGTTAATTATTTTTGGCTAAATATACGTTATGACCTCTAATGTTGGGGTATGCCTTTTCCATTATTCCCTTAAAAAGTTCTAATTTTACTCCCTTACTTTAACATTTTCAATTTTAGTCCTTCACTATTGTTGAATGTTAAAATTGGTATGATTAACTTACATGTCGTAATACTCGATGAAATCATGGAACTTATAAATGTTTGTAATTCCTTTTCTAATTCTCTATTAAAAGGGTAAAAACAAATATTCTTCTCTTAAATGATATTTTTTCTCCACCAAATTTCTTTCCGTTCACCTATTATTTTTGTCATGTAAGTTTAACATCAACTAATTTTTATATTCATCAACAGTCTGATAGGTATCACCTAACAAATATTTTCTTTAATATATAAAAAAAAAAAAAAAGAAAAAGAAATTCAATAACTCCAAAAGAGGAACAATCTCTCTGAGATGTTCCATCAAAACAATGCATCTCCCCACTAGTTCATCCAGAGCCTTAAAATAGCAATACTAAGCCTAAAACCTACGGTCCAAACAGAAAATGAATATCCAAAACATAATAAAGCATAAACATAAATGACCCACAGACATAGAACCAAATAACAGGTCCTTATCTGCTTCTTCAGACACAAGTGTTCGTAACCAAGATCTTACACAGTGATGGACTAAATTGAGAAGTATTAATATCTAAGAGACTGAATTGAACAAAATACTCCAACATTAGATTCACAAATATATATTTATCCTTTCGTCTTAGAGAAATAGACATCTCTCCATGACATGAAGGGAAAAGGCTGTTTATCACTTCAATGTTTTACCAACATTGTTCGATCTTACCATCTCCCCTTTTGTGGTGCATTTTGAAGTGCTCCTTACCTCATCTGCGAATAATAGTTTTCCCAAGTTTCATGAACTTTGAGTCATCTGGCAGACCTATGTTTCTGACCCGTCACCCTTCCGTCAAGATTAGATCCCTTCATCATGGCATATTGCTCTGCAAATTCCTTAGGAAAATAAAGAAGATTTTCCTTAGGGAGCCTAGTTATAAATAACCATGACAATTTTCGAAGAAGGAACCCAAAGAGGGATCCCCTACAAGAAAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGAAAAAAAAAAAACTTTCATATGTTTCAAGCCAAGTCCACATTGGATGCTTCTTATGTGAAGTTAAGCCAAAGAGTTTCTGCGCTGTCTTTAAACAGACGATTGAGAGGAGAAAAGAGTTTATCAGCCGCTTCTATTGAATAGTTTTTATCTTTGCTATTTCAGAAATTCCTACTCTTGATTTTCCCAACAATTCAGTATTCAAGCAGAAGGCAGATGCCTAATACTTTAACCAAAGTAACGACCTATATTTACAAGATTGTTTGACATTGATTTCAAAAGCATGTTATTAGGCCAACTATTATTATACCCATTACTCAAGAGAACCGCATACAGTTATACCCATGAGTTGAATGGTTCAAACTATCTACAATGGTTGCAGAGCATATTATGTTCTTTGTTAAAGAGTGTTGTTTGCAAATCCAACTTGTAACTAAAAACTTCACTCTTTATGAGTCTAATGCTGCCAGTCTGCCACCACTTAGAAATTTAAACGGTTTGTCCAAGCCATATAATTTCTACATTTATAGAGCATTTTCAATTATTAGCTAATTTCCTCAAAGTGGAAGTATGTCGTTGTTCTGGTTTGATTATAATCTTGTACTCTTTCTTTTCCCTGCATGCACAGATTGGTGTTGATCGAAGTGACCTTGAAAAGGTTTTCGTACAGCTTACCCTTGAGATTCTTGCCAAGCAGGTATACTGAGCGTTATACCTATTCTTGTTCTTATGCTCTCAACTGTTTCATACTTTGTGTGCATACAACCGTGTGCTCTCCGCAATCTGTAAAATATGGTGCCTTATTGTAACTAATTAATGCTAGAAATCATAGCAACTGGTGAGGCCCATAGTTGTGTAGTCGGTAAACTTGTAGAGGGGCTTTTATTATGCATGACATTCTAATCTAATAATTGTTGATCATCAAACATGGTAATGTCACTCTGGATTTTTCCTAGACAGAGCTTATCAAAGCTTGCTTTTTCTTTGTTCTTTTCCTTTTTCTTAATTTAATCCATTATTTTTTTGTTTATTGTATGGAGGAGTTGTGATAATGGAACTGCCTCTAATATGCATGAGAGCTCCCCTTAAGCTAAGTGAATTTCCAACAATAGCAACAACAACCCCAAGAAGGTTAAACAAATTTATTTAGAAAGATGATCATTGATCAAGGAGAACTTGTTTTTATCTTCAAGATTTTGACCTCTCCTCAATCTAATTGATCAAACGGATTGAAAGTTCTGAACTTGTATTCTAAAAACAAGAATACAAAGTTCTAATGGAGGTCAGTTATATTCAAGGAGTTTAGGACCGCTTTTTGTTTGCCAAAGAGGTCGATGATTGGCTTGTGGAAGTGTTAAATGGTTGGCACTTTAAAAGAAGAGGGAAGACCCTTTAGTGTTGTGCTACTAGAGCTCTTTGGTGGCATCTTTGGAGAGAAAGGATCTTCGAAGATAAGCTTTTGTCTTTTGATTCTTTTTATATGTATTGTAACAAAAGGTCTATTTAGCTATAATCAACTGACATTTTTGTTTCACACAAGATATCTATCAATTTGACTTCCTTGGAGTCCTTCTTAGCTTCTCACTTCAAATGAAGATGTTCACTGATATAAATTTGCGTTTGTAGAAGTTTGAAGCATATAATGCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTATATATCACTCTCCCTTTCGAGTAATATTTGTCTACAAAAAGTACAGAAGCATCATTGAAATCAAAATGTCACCTTGATAATGTTCCTATTTCAGGTTTTCTCTTTCTTGTTTCCAATATTTGGTGTTCGATAACCATTCCTGTTTGTTGTTTTTATTATTTTTAGAAATGTTTCTAAAATTGTGTAGGAATTTTAGAAACAACAAAACGAAGTTTCTTGTTTTTGTTTCTAGTTTTTTCTAAAAACATAAATGTAAGTATTAGTTTATCATTTTTTTTCCCTAAAATGCACTATCATTTTTGTATAGAATATAATTTCTTTCAATATTAAATTTTAAAAACTTATTTTCATGTAAAAATTTTATTTTTTAATTCAAAACTTAAAAGAACAAGAAACAAGAAATGCTTATTAAACATGTTCTTTTTTTTTCAAAATCGAACCATTAGATTTAGGGAATGTTCAATTTTAGTCTCTGACAACAGGATGACAATTTAAAAGTAAAATGTAATAATTCAAATAATTATAAAAACTCTCCCATCTCTACTCTTCCCCTTCTTTCTTTCCCACTCTCTCTTCTTCTTTTCTTCCAATTTTTTTCTATTTTCAAATCTTAATTTCTTCAATTTCTTTTCCACATTGTTTATTTAGATTTTGCTTAAAACGAAAATGTATATTGGGTTAGATCTGGAAATTTTTCTGAGGAAATGAATTTTGAAAGGAAAAACAAGAAGAAACAGAGAGTGAAAGTGAATAAAGAGATGAAGGCGACATTGTGAAGTTTCTGGAACTTAATAATAATAAAAAATTATTATTATTATTATTATTATTTAAAAATTTCCACATACTCCAAACTTTTAAGGTTCAAAAAGGTAATTTTCCATTTTCATTATTGGAAAAAGAGGAAATTAGAAAAAGAAGAACCGGAAACACAAAATAATTCATTCAGTCACTTCTTGGCCTATGAAGTAGCGAGTATGAACAGCTATTTGTAGTGCCTTTTCCATCCTTGGTGTGCATATGACCATTCAAACATTGAATAGGCTTCCCACAACTGAACTGAAAGAAATAAAGGCTTATCATGATTCCTTCATAATTTCAATTGGTATCTTTAATTTTCTTTCATGGCAACGATTTTGATTATATTATATGTGTGCTACTACTACACCTTTCAGGTCCTTGTCCGTGATATCTGGGTATTTGAGAAATCTCTTTTTCATGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCAATCTAATATCATCCTTCACAGTAGAAGCTTCTTTATCCAATTTTGTAGATCAACAGGTTCCATCTTTACTTTAATAATTTCTTTTTATTATTCTATCATATACAATTGTGTAGTTTATGACTTCACTCCTAAATTATGATATCAACGCGAGAGACGTTCCTAGGAATTTTAATTCTAATAATTTTTGGTATCTTCCTTGTTCAAGCCATCTCTAGTAGAGATAAGCGTGACAGTGATTATTCAAATAATCCTTTTAATCCTTTTCCTTTCTAGTTCCCTGTTCATCAGAATTTCTTTCAGCTAATTAATAACAGTTTTCATTTTT

mRNA sequence

AAAAACCTCTTCCTGTGACCGATCTTACTTTTCATGATCGGAGAAAATAGCGCCAGAGGTTTTCAGATTTGGTACTAGAAATGAATTCCAGATTACTCCAAATCCTGTATCGCACGGCACAGAATCGAGCATTTACTTCTCGGGTTGGAAGTTCAGCAAACTATTCATGTGGCATCACAAATGGTGGTTTAGTTAATCAATTGGGTATTCAGAAGACTTCTTTCCTCAGTAACAGTCACACTGCTTTTTCACTGGTTCGGGGACATAAGATGATAATATGTTCTGCAGTGGCTGCAGATTTATCAATATTCTCGCATAGCATTGGCATTAGGTTGGCGACAACACAAGCAAAAGCCCCCCCACAAGCACGTCAAATGGGAGCCCTCAAAGTTTCCATGTTGAGTCCTGGAATTATCTATGAACCTTATTCACCTCGTCAACCAATCCCATTTTGGCAGAGATGGTTCACAAGAAGTGGTTGGAGGAGAACAAAAGACGATATCATTTTAGAGCTAAAAAGTGCTTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGAAACAATTTTACGAAGAGGCAGTAAATTTATATAAAGAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGCATTGAAGAATGAAATCAAACTCAGAGAATCCAAATGGAACAAAATTGGTGTTGATCGAAGTGACCTTGAAAAGGTTTTCGTACAGCTTACCCTTGAGATTCTTGCCAAGCAGAAGTTTGAAGCATATAATGCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTCCTTGTCCGTGATATCTGGGTATTTGAGAAATCTCTTTTTCATGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCAATCTAATATCATCCTTCACAGTAGAAGCTTCTTTATCCAATTTTGTAGATCAACAGGTTCCATCTTTACTTTAATAATTTCTTTTTATTATTCTATCATATACAATTGTGTAGTTTATGACTTCACTCCTAAATTATGATATCAACGCGAGAGACGTTCCTAGGAATTTTAATTCTAATAATTTTTGGTATCTTCCTTGTTCAAGCCATCTCTAGTAGAGATAAGCGTGACAGTGATTATTCAAATAATCCTTTTAATCCTTTTCCTTTCTAGTTCCCTGTTCATCAGAATTTCTTTCAGCTAATTAATAACAGTTTTCATTTTT

Coding sequence (CDS)

ATGAATTCCAGATTACTCCAAATCCTGTATCGCACGGCACAGAATCGAGCATTTACTTCTCGGGTTGGAAGTTCAGCAAACTATTCATGTGGCATCACAAATGGTGGTTTAGTTAATCAATTGGGTATTCAGAAGACTTCTTTCCTCAGTAACAGTCACACTGCTTTTTCACTGGTTCGGGGACATAAGATGATAATATGTTCTGCAGTGGCTGCAGATTTATCAATATTCTCGCATAGCATTGGCATTAGGTTGGCGACAACACAAGCAAAAGCCCCCCCACAAGCACGTCAAATGGGAGCCCTCAAAGTTTCCATGTTGAGTCCTGGAATTATCTATGAACCTTATTCACCTCGTCAACCAATCCCATTTTGGCAGAGATGGTTCACAAGAAGTGGTTGGAGGAGAACAAAAGACGATATCATTTTAGAGCTAAAAAGTGCTTATGCAATTGCAAAATTAAGAAAGAAGGGGTACTCAAAGAAACAATTTTACGAAGAGGCAGTAAATTTATATAAAGAGATAAACACTTTGATAGCAAATGGTGACAAAACATCGTTGAGGAAAGCAGTCACAGAGAATATGTATTCAGCATTGAAGAATGAAATCAAACTCAGAGAATCCAAATGGAACAAAATTGGTGTTGATCGAAGTGACCTTGAAAAGGTTTTCGTACAGCTTACCCTTGAGATTCTTGCCAAGCAGAAGTTTGAAGCATATAATGCTGAAGGTGCTGTCGTTGCTGGAGATAAATCTAAGGAGGTCCTTGTCCGTGATATCTGGGTATTTGAGAAATCTCTTTTTCATGAGGGAGCTTTTTGGCGTCTCTGTGGGCGAATTCCAATCTAA

Protein sequence

MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVRGHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWNKIGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI

Homology

[Close]

BLAST of Carg11766 vs. NCBI nr
Match: KAG7023934.1 (hypothetical protein SDJN02_14962 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.1 bits (1437), Expect = 4.2e-155
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNKIGVDRSDLEKVFVQLTLEILAKQKFEAY 240
           NGDKTSLRKAVTENMYSALKNEIKLRESKWNKIGVDRSDLEKVFVQLTLEILAKQKFEAY
Sbjct: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNKIGVDRSDLEKVFVQLTLEILAKQKFEAY 240

Query: 241 NAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI 283
           NAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI
Sbjct: 241 NAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIPI 282

[Close]

BLAST of Carg11766 vs. NCBI nr
Match: XP_022961563.1 (39S ribosomal protein L45, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 544.3 bits (1401), Expect = 6.3e-151
Identity = 281/301 (93.36%), Postives = 281/301 (93.36%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTE MYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTEKMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. NCBI nr
Match: XP_022961564.1 (uncharacterized protein LOC111462108 isoform X2 [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 5.9e-149
Identity = 280/301 (93.02%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTE MYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTEKMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQ FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQ-FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. NCBI nr
Match: XP_022968772.1 (uncharacterized protein LOC111467908 isoform X1 [Cucurbita maxima])

HSP 1 Score: 536.2 bits (1380), Expect = 1.7e-148
Identity = 276/301 (91.69%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQ LYRTAQNRAFTSRVGSSANYSCGITNGG V+QLGIQKTSFLSN+HTAFSL R
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKTSFLSNTHTAFSLAR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSH IGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTENMYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. NCBI nr
Match: XP_023520770.1 (uncharacterized protein LOC111784221 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-148
Identity = 276/301 (91.69%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQ LYRTAQNRAFTSRVGSSANYSCGITNGG V+QLGIQKTSFLSN+HTAFSL R
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKTSFLSNTHTAFSLAR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKT LRKAVTENMYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTLLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. ExPASy TrEMBL
Match: A0A6J1HC62 (39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462108 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.1e-151
Identity = 281/301 (93.36%), Postives = 281/301 (93.36%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTE MYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTEKMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. ExPASy TrEMBL
Match: A0A6J1HEF0 (uncharacterized protein LOC111462108 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462108 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.9e-149
Identity = 280/301 (93.02%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR
Sbjct: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTE MYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTEKMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQ FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQ-FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. ExPASy TrEMBL
Match: A0A6J1HUF6 (uncharacterized protein LOC111467908 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467908 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.3e-149
Identity = 276/301 (91.69%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQ LYRTAQNRAFTSRVGSSANYSCGITNGG V+QLGIQKTSFLSN+HTAFSL R
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKTSFLSNTHTAFSLAR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSH IGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTENMYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. ExPASy TrEMBL
Match: A0A6J1HZ27 (uncharacterized protein LOC111467908 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467908 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.8e-147
Identity = 275/301 (91.36%), Postives = 277/301 (92.03%), Query Frame = 0


Query: 1   MNSRLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKTSFLSNSHTAFSLVR 60
           MNSRLLQ LYRTAQNRAFTSRVGSSANYSCGITNGG V+QLGIQKTSFLSN+HTAFSL R
Sbjct: 1   MNSRLLQTLYRTAQNRAFTSRVGSSANYSCGITNGGSVSQLGIQKTSFLSNTHTAFSLAR 60

Query: 61  GHKMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120
           GHKMIICSAVAADLSIFSH IGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ
Sbjct: 61  GHKMIICSAVAADLSIFSHGIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQ 120

Query: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180
           PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA
Sbjct: 121 PIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIA 180

Query: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLE 240
           NGDKTSLRKAVTENMYSALKNEIKLRESKWNK                   IGVDRSDLE
Sbjct: 181 NGDKTSLRKAVTENMYSALKNEIKLRESKWNKVYWEMILPVVKIRTLRARLIGVDRSDLE 240

Query: 241 KVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 283
           KVFVQLTLEILAKQ FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 241 KVFVQLTLEILAKQ-FEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 300

[Close]

BLAST of Carg11766 vs. ExPASy TrEMBL
Match: A0A1S3BPQ8 (39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492196 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.7e-130
Identity = 248/298 (83.22%), Postives = 259/298 (86.91%), Query Frame = 0


Query: 4   RLLQILYRTAQNRAFTSRVGSSANYSCGITNGGLVNQLGIQKT-SFLSNSHTAFSLVRGH 63
           R LQ LYRT + R FTS +GSSANYSCGITN   V+QLGIQKT SFLSNSH+AFSL RGH
Sbjct: 7   RSLQTLYRTPKIRPFTSPIGSSANYSCGITN---VSQLGIQKTSSFLSNSHSAFSLARGH 66

Query: 64  KMIICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVSMLSPGIIYEPYSPRQPI 123
           KMI+CSAVAA+ S+FSH IG+RL TTQAKAPPQARQ  ALKVSMLSPG IYEPYSPRQ I
Sbjct: 67  KMIVCSAVAAEFSVFSHGIGVRLVTTQAKAPPQARQKVALKVSMLSPGFIYEPYSPRQQI 126

Query: 124 PFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAVNLYKEINTLIANG 183
           PFWQRWFTRSGW+RTKDDIILELKSAYAIAKLRKKGYSKKQFYEEA  LYKEINTLIANG
Sbjct: 127 PFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGYSKKQFYEEAAILYKEINTLIANG 186

Query: 184 DKTSLRKAVTENMYSALKNEIKLRESKWNK-------------------IGVDRSDLEKV 243
           DKTSLRKAVTENMYSALKNEIKLRESKW+K                   IGVDRSDLEKV
Sbjct: 187 DKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLIGVDRSDLEKV 246

Query: 244 FVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 282
           FVQLTLEILAKQKFEAYN+EGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP
Sbjct: 247 FVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRIP 301

[Close]

BLAST of Carg11766 vs. TAIR 10
Match: AT5G27395.1 (Mitochondrial inner membrane translocase complex, subunit Tim44-related protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-75
Identity = 147/256 (57.42%), Postives = 185/256 (72.27%), Query Frame = 0


Query: 50  SNSHTAFS-LVRGHKM---IICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVS 109
           ++  +A+S L  GH +   ++ S + A+   F +    R ATTQ KAPPQ ++ GA++VS
Sbjct: 60  AHGKSAYSRLYEGHSVNTHLLRSTMIAEFLPFMNE--KRSATTQVKAPPQLQKTGAVRVS 119

Query: 110 MLSPGIIYEPYSPRQPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFY 169
           M+SPG +YEPY+ R+ I  W+R FTRSGWRRTK+D I EL+SAYAIAKLRK GYSK  FY
Sbjct: 120 MVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFY 179

Query: 170 EEAVNLYKEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWN-------------- 229
            EA+ LYK+IN  +ANG+K ++RK VTE MYSALKNEIK RE+ W+              
Sbjct: 180 IEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIR 239

Query: 230 -----KIGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKS 283
                 IG+DR+DL+K F+QLTLE L KQKFEAY+A+G V AGDK+KEVLVRDIWVFEKS
Sbjct: 240 TLQARLIGIDRTDLKKAFIQLTLEFLTKQKFEAYDAKGNVAAGDKNKEVLVRDIWVFEKS 299

[Close]

BLAST of Carg11766 vs. TAIR 10
Match: AT5G27395.2 (Mitochondrial inner membrane translocase complex, subunit Tim44-related protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-75
Identity = 147/256 (57.42%), Postives = 185/256 (72.27%), Query Frame = 0


Query: 50  SNSHTAFS-LVRGHKM---IICSAVAADLSIFSHSIGIRLATTQAKAPPQARQMGALKVS 109
           ++  +A+S L  GH +   ++ S + A+   F +    R ATTQ KAPPQ ++ GA++VS
Sbjct: 43  AHGKSAYSRLYEGHSVNTHLLRSTMIAEFLPFMNE--KRSATTQVKAPPQLQKTGAVRVS 102

Query: 110 MLSPGIIYEPYSPRQPIPFWQRWFTRSGWRRTKDDIILELKSAYAIAKLRKKGYSKKQFY 169
           M+SPG +YEPY+ R+ I  W+R FTRSGWRRTK+D I EL+SAYAIAKLRK GYSK  FY
Sbjct: 103 MVSPGFVYEPYALREKISIWRRCFTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFY 162

Query: 170 EEAVNLYKEINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWN-------------- 229
            EA+ LYK+IN  +ANG+K ++RK VTE MYSALKNEIK RE+ W+              
Sbjct: 163 IEALELYKQINIQMANGEKKTIRKNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIR 222

Query: 230 -----KIGVDRSDLEKVFVQLTLEILAKQKFEAYNAEGAVVAGDKSKEVLVRDIWVFEKS 283
                 IG+DR+DL+K F+QLTLE L KQKFEAY+A+G V AGDK+KEVLVRDIWVFEKS
Sbjct: 223 TLQARLIGIDRTDLKKAFIQLTLEFLTKQKFEAYDAKGNVAAGDKNKEVLVRDIWVFEKS 282

The following BLAST results are available for this feature:

BLAST of Carg11766 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023934.1	4.2e-155	100.00	hypothetical protein SDJN02_14962 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961563.1	6.3e-151	93.36	39S ribosomal protein L45, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022961564.1	5.9e-149	93.02	uncharacterized protein LOC111462108 isoform X2 [Cucurbita moschata]	[more]
XP_022968772.1	1.7e-148	91.69	uncharacterized protein LOC111467908 isoform X1 [Cucurbita maxima]	[more]
XP_023520770.1	2.9e-148	91.69	uncharacterized protein LOC111784221 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg11766 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg11766 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HC62	3.1e-151	93.36	39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1HEF0	2.9e-149	93.02	uncharacterized protein LOC111462108 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HUF6	8.3e-149	91.69	uncharacterized protein LOC111467908 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HZ27	7.8e-147	91.36	uncharacterized protein LOC111467908 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BPQ8	1.7e-130	83.22	39S ribosomal protein L45, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Carg11766 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27395.1	1.6e-75	57.42	Mitochondrial inner membrane translocase complex, subunit Tim44-related protein	[more]
AT5G27395.2	1.6e-75	57.42	Mitochondrial inner membrane translocase complex, subunit Tim44-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007379	Tim44-like domain	SMART	SM00978	Tim44_a_2	coord: 145..281 e-value: 4.7E-22 score: 89.3
IPR007379	Tim44-like domain	PFAM	PF04280	Tim44	coord: 146..279 e-value: 1.4E-32 score: 112.9
None	No IPR available	GENE3D	3.10.450.240		coord: 146..282 e-value: 4.8E-31 score: 109.6
None	No IPR available	PANTHER	PTHR28554	39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL	coord: 10..213 coord: 213..280
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 146..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11766-RA	Carg11766-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome